Silkworm Genome Informatics Database

Gene

KWMTBOMO15364

Pre Gene Modal

BGIBMGA005113

Annotation

PREDICTED:_dihydrolipoyllysine-residue_succinyltransferase_component_of_2-oxoglutarate_dehydrogenase_complex?_mitochondrial_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr25(-):10114278-10121606 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 2.051

CDS

ATGATCAGACGTCGGATAATACGCTTCATATCCCAGGGAAGACATATTAGAATACTTCAATATTCAAGTAATTCCAATATTCGAAATTATACTCTACCACAATTTAAGACTTTTACGAATAGGACAATAAAAGAAGTTATAGTAATTCATATCCCAATCAGCCAGGACTTTCATACCGGTAGACAGCTTTTAGGGGTAGAAGAAGTTAAAGCGCCAACCTTTCCGGACTCTGTCTCCAGCGGAGATGTCAAGTTGGTAAAGAAAGAAGGCGACGCCGTGGCTATGGACGAGGTGGTCCTGGAAATCGAGACGGACAAAACGGCCCTCCCGGTCATGTCGCCCGGTAACGGAAAAATCGTAAAGATGCTGGTCAAAGAAGGAGAATCTGTAAAATCTCAACAACCCTTGTTCCAGGTTGATGTTACTGGAGAAGCTCCATCTAAAGCTGCTCCTGCGGCCACTCCAGCCGCAGCTCCAGTTCCTGCCGCTGCCACTGCTCCCACTCCTGCCGCTGCCCCTGCGCCAGCGGCAGCTAAGGCCCCAGCTACAACCCCCACCACTACTAAGGCTGCTGTTACTAAGCCACCTACAGCTAAACCTGCAGCAGCTAAAAAACCGACTGGACCCACACTAGCGACACAAAGGATCGGTGATCCAACAAAGACGATATCGGGGACCAGAACCGAACACCCGGTGCCAATGAACAAGATGCGGAAACGTATCTCTGAACGATTAAAGGAAGCACAGAACACGACTGCAATGCTTACTACATTCAACGAATGCGATATGAGTAAATTAATGGCGTTCCGCAAAGCGAACCTCGAAGCTTTCACAAAAAAGTACGGAGTGAAGTTATCTTTCATGTCGCCTTTCTTGAAGGCATCTGCTAATGCCCTGATGGATCAGCCAGTTGTAAACGGTGTTATTATTGGAGATAATATAATTTATAGAGACTATGTGGATATTTCTGTGGCGGTTGCGACTCCTCGAGGTCTAGTCGTGCCCGTACTTCGTAATGTAGAGTCGATGGACTATCCACGTATTGAGCTTGCTATGGGTGCTCTCGCTGAAAAGGCCAGAACCGGTAAGCTAACACCGGCTGACATGCAAGGCGGCACATTCACGATTAGCAACGGAGGCGTTTTCGGCTCTCTACTCTCAATGCCGATCATCAATTTACCACAATCAGCAATACTGGGCATGCACGCTATATTTCAACGACCGGTCGCAATAAACGGCAAGATGGGTGGATGA

Protein

MIRRRIIRFISQGRHIRILQYSSNSNIRNYTLPQFKTFTNRTIKEVIVIHIPISQDFHTGRQLLGVEEVKAPTFPDSVSSGDVKLVKKEGDAVAMDEVVLEIETDKTALPVMSPGNGKIVKMLVKEGESVKSQQPLFQVDVTGEAPSKAAPAATPAAAPVPAAATAPTPAAAPAPAAAKAPATTPTTTKAAVTKPPTAKPAAAKKPTGPTLATQRIGDPTKTISGTRTEHPVPMNKMRKRISERLKEAQNTTAMLTTFNECDMSKLMAFRKANLEAFTKKYGVKLSFMSPFLKASANALMDQPVVNGVIIGDNIIYRDYVDISVAVATPRGLVVPVLRNVESMDYPRIELAMGALAEKARTGKLTPADMQGGTFTISNGGVFGSLLSMPIINLPQSAILGMHAIFQRPVAINGKMGG

Uniprot

NA

ProteinModelPortal

NA

PDB

1SCZ E-value=1.65128e-51, Score=512

KEGG

101740619 K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61

PATHWAY

00020    Citrate cycle (TCA cycle) - Bombyx mori (domestic silkworm)
00310    Lysine degradation - Bombyx mori (domestic silkworm)
00380    Tryptophan metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)

GO

GO:0008152 GO:0016746 GO:0005524 GO:0006418 GO:0004818 GO:0005737 GO:0006424 GO:0006412 GO:0016876 GO:0043039

Length:

417

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.61865

Exp number, first 60 AAs:

0.00246

Total prob of N-in:

0.04616

outside

1 - 417

Pi

217.145287

Theta

151.86559

Tajima's D

1.275634

CLR

0.633461

CSRT

0.735913204339783

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics