Silkworm Genome Informatics Database

Gene

KWMTBOMO15362

Pre Gene Modal

BGIBMGA005114

Annotation

PREDICTED:_uncharacterized_protein_LOC106129887_[Amyelois_transitella]

Location

Bomo_Chr25(-):10100175-10107166 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.178

CDS

ATGAGGCGAGGTCACTTAAGTTCAGGCGGTTGGCGGACTGAAAATCCCAGACAACATAGGCCTAGAAACCCAGGAAACCCACGCTTCAGGCCTCCCAGACCGTATAATCTTCACAATCCTAACAGGTTCCCACATCCAGGGCCTAGACTACACAGACCGCCTCATTTTGGAAATTATCCTAATAGAGGAGACCAGCATTATGATGACAATACTGACCATTATGAGAGACACACTTACAGAAACCATAACAGTCCTCAGCGCAATAGCTCCCTTAATTCTAGACATAGAGGTCATTACCAAAATAGAGGAGGAGGCCAAAGGCAGATACTTCCATACCTCCAACAAACAAGAACACTTGAAACTCAAATTTCAAATATTAAATGTTATGATAACAATAAATCACAAGCATACCATATAAACAGCATGGGTGATGTCGACCACAGAATTGTTGCTAACAATTCACTTGCTCAAGAAAGACTTTTAAATCACAGTCCTTGGGTAAACCCTCATTTTGATTGCAAATCATACCAAAATAAAAGCCCTCAAAAACATCATTTAAAGTACAATGAAAATATCGAAAATAAAAACAGTCAACCAAACTATCCAGGACACAGACCCCCTGCTTCTGATCACTACAGTACCACTCCTGATTTAGAAAACACAAATAATGATATATCATTCAGCAGGTCTATAGATGATACTGTAGATATTGTTAGAAAGCGACTTTTAAACAGGAATGAGCCTCCAAGTCCATCTTGTGATGATCCAAATGAAAATCAAATGACTACAATCAACACATCATCAATTCCATATGAGAATCCTCAACAAGAGCAGCCTGTAAAAAGAAGAGTGCAGAGACAAAGACAAATAGAAAAATCGAACTGTGACAAAATGAAAAACAATATTGTGAAACAGTTATTCAAAATGGACAAAGACAAAATACATAAATTGATGGACAACCCTAATTCATCAACAAAATTTGAATATGCAATAAACAGTTTTATAACAGAATCTCAGAACAGCTTGAATCGTCACATGAGATCATTAGCCGAGAAATCTCTCAGTAGTTCCAGTCATGACTTTATTCACAACGACAATAATACTATTTATGAAGACACATTCATGAAGCAGATGCAGTGTATCTTAGATCCGCAAGATACCGTTTTACTTGAAGACATAAAACCACTTGTTTTGGCTGAACTTAGTAAGATTTTGAAATTAAATAATGTGCAACAGGTGTATGAGATTGCAGAAACTGAAGATAACACTTATAGTGCAGAACATGTTGATTATGATTATCGTAGTGAAAAAATATATAACGATAATTATGCACAAGAAAGATATTTAAATCAAGATGAAATTGATGATTATACTAATTTCCACAGTGGTGAGGTACCAAAATTCGATGAACACGATGAGATGAAACATCCCATTCAAAGTCACCCTAATAATCTGTATAGAAGACGAAGCTCAGAGAGTTTTAAAAGTACAGAAAATAAAAGAAACAATACCAACCAACAGGTAATTCCTGAAATAAAGCCCTTGTTTGAAACACACAGAGAACAGAGCTCTGAAGATGAAGATCCTTTTGCTGAATTAGACAGGCAATACCATGTTCCAGTTGACCACACTTTTCTAGAAAGTGAGGACTGCATAAATCCGTCCACTTCAACATCAAAGTCAGCCAATGAGTTTGTTTCACCTAAAACTGAAAAATCCTCATTAGATTATATTCCAAATAATTCTGAACAGGTAAAAAATGAGATACAAATCAAAAATAACTCAGATTTATGTATAAAACTAGAAAATACTTTACCTGAACAAGATTCAAATGTAATAAGTGAAATCATTACAAATGATTTAACATGTACTGTAGAGAGCCCATTTCAGAATGCATCAATGCAATCTTATTCAGAAACAATGAACAAACATTTTACAAGCACTGAGATAAAAGAAGAAATAAATCCAGTACCTAAATATGTTGAAAAAAAAATTTCAGAAAAGGATTTAATTACAAACAAAGGGATTGTACCTACAAGTTCTCGTAAAAGATCAATTGACCAAAGACCGTATCATCGAAAAGAAAAACGTAAAAAAAGCGATCCAGGACTTTACGATTCCAACAAACATAATAGTAATAAAAACACAAATAAAAATGTAAATAGTGGCACCTCAAAAAATGTTGAGAATTCTGAAGATGTTCCAAAACCATTGTTTAATTTGTTCTTATCAAAGAATGAGAATAATAAACATCCATCCAAAGATTCTAAAAGGTTAGAAACTGGAGACAAGGGATACTCAGATAAATATGTCAAAAGGAAAGAATATACAAAAAAACATAGACATACAACACCAATGAAAAAACATAATAATACTAACTATAGTCATTCCATAATATCTAAAGATGATAATACAAGTCCTGGAGATATTAGCACTAGTAGCAATAATCAAAATTCTAACAGAATTGATTCTAAAACGAAATTAAAAACAATTGACATGTTTATGGATCAGCCCAAAAAATCAAATTTACATCAAGCACATAGAAATACATCCATAGCTCCTAGTAAAAATGGAAATCCAATAGGAAAACATAGCCCAAACAAACAAACCGGTGTAAGTCATAAAGAAAATAGTATTAAAAAGTTAATTTCAAAGGAAACTCAAACAATAAATAAAAGCACATTCAATACTAAAAGTAGTCAAACTGAAAAGAAGAAATTTAATACTAAATCAATACAAACAGACCCAATCTCGGTGCAGAAAGAAACTACAAAATCAACTGATGTTTTTGAGAGAATGAAAGAGATTGACCTAGAAATACAAGTACTCCTGCAAGAGAAGTTTAAGCTCTATAATTCATTTGAGTCAAAGAATACTTGTCCGGTTAATGAACAAACTCTTGGCATGACAGTATTAAATGTAGTGCCAGTAAATAGAGGAGATGGAACGGAGTCTGCTGAAATAATTATTGAAGGTGATTTATCAGAAGACTCTATTGTAGATGATTTCAGCAACATACCTGTTGAAGAGCTTGAACAAATAGCCTTAGAGACAGTTGAAGAAACTGAACCAACACAAGAAAGAAGATTAAGAAGACACAGTCAAAAACAAGTGGAACAAAATGTTTCTGCCTTAAGTCCTTCATCACTTAAAAGAAGTAATAGGAAAGGAAAACCGCTTAACATATCACTCTTGGAGCAAATCATAACTGATGACAGGCCTCTTGAAGATATAATCGTACTTGACGAACTTGAAAATGTACCATCGAAAGTGAATAAAAAGAAATCACAAAGAACTCACACACCAAAAGCTAGAAAAGTATCGAAGAAAATGAAACCCTCAAGTACTTCTATTAATCTATCACAGCATAATATCAAAGAATGCTCAGTTGTTTTACAACCTCTAGATATAAGTCCTTATTTAGAATTATTATGTGAAGAACCTTCTGAATGTGATGAGGCTACAGCTGGCCATAAATCACCCATTTATCTATTCTCTAATGACACCTTAGAACTACCCTCAGAAACACTCAATCAACAAATGGAAGTTATAGAAGAAACAGATGTCAATGACATACAGTTTGACATGCTAGATGTTTCAGAGGACATAGTTATCGGGGACAATTGTGAGATTAAATCTAGGGACACTGATAGAATAGATGTACCTATCAGTGAAGATATAATACTAGATAACAGTCAGTCTTCATGTGACAACGCGATATCGGAGTTTGCACAAAATGAACCAGAATGCAAAACCTATGATTACTCTACTGATGAGAATCTACGCCGAGATGCAATTACAGTTACTGGGAACGCTGATGCAGTCCTTGCTATTGAGTGCATAGAAAACAACTTCATTGCAGCTTGTCTAGATGGTAATGTCTATCACTTCAACAGTGATGGCCAACTGCTGAATACTTTAAGGGGCTCTAATTTAGCAGTTACCTGCATTACTATAGTAAAAGAAAAATATGGGACGACAGTCTATACTGGTTCGCTGGATTCTAGGATACGATATTACGATTTAGAGACAGGAGTGGAAAAGGGCCCGGAGTGCAATGTTCTTAGTCCAATCCAGACTATGGATCGCGCCTGGGACACTATATTCGTCGGTACAAGAACTGGTTTTGTGCTGCAATTTGAATGCAAAAACAACATGCTCATTCCAGTCAGCACTGTGAAATTTTCGGATCAGTCAATCTTGGCTCTGCGAGCTATGAAAGAAGGCCCAAGGAAGGTTCTACTTGTGGCAGCGCGTTCAGAGAATGTGACAATTAAGGACGCACAAACAGGTCTGCTGCTAAGGTCCTTAGTGGGTCCAAAAATGACTGTCTACACTTTATTATTTGAAGATGGCAAAGTGTACTGTGGAACGAGCAGTCATCAGATACATGTATTTGATTATAGTACTGGCAGCCACGTTGGTTCGCACGAAGGCGGTAAAGGCGCGGTGTGCCTGCGAGCGACGGGCGGGTTGGTGTTCGCGGGCTGCTACGATGGCTGCGTGTATGTGTACCGCGAGGGAGAGACTAGACCCCTCGCGCAGTTACGTGGCCCCAGCCTTATGTTACTGTCTCTGGCTATTGTTGGCAGCAAGATAATTGCGGGCTATAAAGATAGAGGATTGTATATATGGAAGATACCTTTAAATATACTAAAGGAAATGATTTTATGA

Protein

MRRGHLSSGGWRTENPRQHRPRNPGNPRFRPPRPYNLHNPNRFPHPGPRLHRPPHFGNYPNRGDQHYDDNTDHYERHTYRNHNSPQRNSSLNSRHRGHYQNRGGGQRQILPYLQQTRTLETQISNIKCYDNNKSQAYHINSMGDVDHRIVANNSLAQERLLNHSPWVNPHFDCKSYQNKSPQKHHLKYNENIENKNSQPNYPGHRPPASDHYSTTPDLENTNNDISFSRSIDDTVDIVRKRLLNRNEPPSPSCDDPNENQMTTINTSSIPYENPQQEQPVKRRVQRQRQIEKSNCDKMKNNIVKQLFKMDKDKIHKLMDNPNSSTKFEYAINSFITESQNSLNRHMRSLAEKSLSSSSHDFIHNDNNTIYEDTFMKQMQCILDPQDTVLLEDIKPLVLAELSKILKLNNVQQVYEIAETEDNTYSAEHVDYDYRSEKIYNDNYAQERYLNQDEIDDYTNFHSGEVPKFDEHDEMKHPIQSHPNNLYRRRSSESFKSTENKRNNTNQQVIPEIKPLFETHREQSSEDEDPFAELDRQYHVPVDHTFLESEDCINPSTSTSKSANEFVSPKTEKSSLDYIPNNSEQVKNEIQIKNNSDLCIKLENTLPEQDSNVISEIITNDLTCTVESPFQNASMQSYSETMNKHFTSTEIKEEINPVPKYVEKKISEKDLITNKGIVPTSSRKRSIDQRPYHRKEKRKKSDPGLYDSNKHNSNKNTNKNVNSGTSKNVENSEDVPKPLFNLFLSKNENNKHPSKDSKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPGDISTSSNNQNSNRIDSKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTEKKKFNTKSIQTDPISVQKETTKSTDVFERMKEIDLEIQVLLQEKFKLYNSFESKNTCPVNEQTLGMTVLNVVPVNRGDGTESAEIIIEGDLSEDSIVDDFSNIPVEELEQIALETVEETEPTQERRLRRHSQKQVEQNVSALSPSSLKRSNRKGKPLNISLLEQIITDDRPLEDIIVLDELENVPSKVNKKKSQRTHTPKARKVSKKMKPSSTSINLSQHNIKECSVVLQPLDISPYLELLCEEPSECDEATAGHKSPIYLFSNDTLELPSETLNQQMEVIEETDVNDIQFDMLDVSEDIVIGDNCEIKSRDTDRIDVPISEDIILDNSQSSCDNAISEFAQNEPECKTYDYSTDENLRRDAITVTGNADAVLAIECIENNFIAACLDGNVYHFNSDGQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYDLETGVEKGPECNVLSPIQTMDRAWDTIFVGTRTGFVLQFECKNNMLIPVSTVKFSDQSILALRAMKEGPRKVLLVAARSENVTIKDAQTGLLLRSLVGPKMTVYTLLFEDGKVYCGTSSHQIHVFDYSTGSHVGSHEGGKGAVCLRATGGLVFAGCYDGCVYVYREGETRPLAQLRGPSLMLLSLAIVGSKIIAGYKDRGLYIWKIPLNILKEMIL

Uniprot

H9J6H2 A0A2A4JE42 A0A1E1W2K3 A0A2H1VVD3 A0A2W1BF88 A0A212FJB2 + More
A0A194RKG1 A0A194Q7F4 A0A0L7L8T3

Pubmed

19121390 28756777 22118469 26354079 26227816

EMBL

BABH01019733 NWSH01001910 PCG69710.1 GDQN01009849 JAT81205.1 ODYU01004499 + More
SOQ44442.1 KZ150247 PZC71867.1 AGBW02008295 OWR53799.1 KQ460045 KPJ18027.1 KQ459324 KPJ01472.1 JTDY01002177 KOB71943.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000053240 UP000053268 UP000037510 + More

PRIDE

H9J6H2

Pfam

PF00071 Ras

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR001680   WD40_repeat
IPR036322   WD40_repeat_dom_sf
IPR011047   Quinoprotein_ADH-like_supfam
IPR005225   Small_GTP-bd_dom
IPR027417   P-loop_NTPase
IPR001806   Small_GTPase

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998
SSF52540   SSF52540

Gene 3D

2.130.10.10

ProteinModelPortal

H9J6H2 A0A2A4JE42 A0A1E1W2K3 A0A2H1VVD3 A0A2W1BF88 A0A212FJB2 + More
A0A194RKG1 A0A194Q7F4 A0A0L7L8T3

PDB

6G6N E-value=3.86262e-10, Score=161

KEGG

101740758 no KO assigned | (RefSeq) putative uncharacterized protein DDB_G0282133

GO

GO:0016021 GO:0005525 GO:0003924 GO:0005515 GO:0007264 GO:0005524 GO:0006418 GO:0004818 GO:0005737 GO:0006424 GO:0006412 GO:0016876 GO:0043039

Length:

1557

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.92684

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1 - 1557

Pi

213.400866

Theta

189.549743

Tajima's D

0.49377

CLR

262.255187

CSRT

0.510974451277436

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics