Gene

KWMTBOMO15360

Pre Gene Modal

BGIBMGA005082

Annotation

PREDICTED:_potassium_channel_subfamily_K_member_9_[Amyelois_transitella]

Location

Bomo_Chr25(+):10073417-10087038      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.85

CDS

ATGAAGCGGCAGAATGTACGAACATTGTCACTTGTGGTTTGCACTTTTACGTATCTTCTCATCGGAGCAGCGGTCTTTGATGCATTGGAGTCAGACACCGAAAGTAAAAGATTAGAGGTGCTGTCAGACATGAAAAATGGCTTATTACGCAAATATAATATAAGTGCTGAAGACTACCATGTGATAGAAATAGTATTGATAGAGAATAAGCCCCACAAAGCTGGTCCACAGTGGAAGTTCGCAGGAGCATTCTATTTTGCCACTGTCGTTTTAGCTATGATTGGCTATGGACATTCCACACCTGTTACTGTAGGAGGAAAGGCTTTTTGTATGGCCTATGCCATGGTGGGTATACCCCTAGGGCTGGTGATGTTCCAGAGTATCGGGGAACGGTTAAATAAGTTCGCTTCAGTTGTGATTCGTAGAGCGAAATGTTATCTGCGTTGTAATACCACTGAAGCAACCGAAATGAATCTGATGTTTGCTACTGGAATGCTCTCATCAATCATAATAACTACAGGAGCCGCCGTATTCTCTCGGTACGAAGGCTGGAGCTACTTCGATAGTTTCTATTACTGCTTCGTGACGCTGACCACCATCGGCTTCGGAGACTACGTCGCTCTGCAAAACGATCAAGCCTTGACCAGTAAACCCGGATATGTGGCCTTGAGTCTCGTCTTCATATTGTTCGGGCTGGCCGTTGTCGCCGCCAGCATCAACTTACTCGTTCTCAGATTCATGACCATGCAAGCCGAAGAGAACGCTCGAGACGAAGACAAAGAAGGTTCTAGAACATTGCTACCGATAGAGGGACACGGCATCGCGGCCCGGCAGCGTTCACACGACGACCAGGCGTCTGTATGCTCGTGCAACTGTTTGGGCAATAAGCAGTGTGAGAGCGGAGCTTTACTCGAAGCTCCTACCCGACCTTATCGTCTGCGAGCGCGGGCGTCTCTCACTCAAGACATCATCGAACGAGCATCCGTTTAA

Protein

MKRQNVRTLSLVVCTFTYLLIGAAVFDALESDTESKRLEVLSDMKNGLLRKYNISAEDYHVIEIVLIENKPHKAGPQWKFAGAFYFATVVLAMIGYGHSTPVTVGGKAFCMAYAMVGIPLGLVMFQSIGERLNKFASVVIRRAKCYLRCNTTEATEMNLMFATGMLSSIIITTGAAVFSRYEGWSYFDSFYYCFVTLTTIGFGDYVALQNDQALTSKPGYVALSLVFILFGLAVVAASINLLVLRFMTMQAEENARDEDKEGSRTLLPIEGHGIAARQRSHDDQASVCSCNCLGNKQCESGALLEAPTRPYRLRARASLTQDIIERASV

Similarity

Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
Belongs to the tubulin family.

Uniprot

A0A2A4J4L4   A0A2H1WFY8   A0A194RL23   A0A194Q7V6   A0A212FJ93   A0A2W1BDJ7   + More
A0A2S1ZBF1   A0A1B6CEA1   K7IR70   A0A0M9A4P6   A0A0C9R6I7   A0A1I8MRJ4   A0A088A5T7   A0A067QGT3   A0A1A9YRD9   A0A1A9UYZ4   A0A1B0FFP9   A0A1B6L1K7   A0A1A9Z9N2   A0A154P5R5   A0A0K8UZP6   A0A1I8PKQ8   A0A2A3EKK6   A0A0A9XJ12   A0A195FB09   E2A4D4   A0A0A1XCQ6   A0A310SPY7   A0A151J9F5   A0A195CMP3   A0A151I2T9   A0A151XCK4   A0A1B0GIG7   A0A034VVK3   A0A026W797   A0A2S2Q7N3   A0A1S4FGL8   Q172H0   A0A182H1K4   A0A1A9WY63   A0A182IX12   A0A182XWW9   A0A084WRD3   A0A182PAE7   A0A182UZZ3   A0A182JRI2   A0A182UJZ1   Q7QC61   A0A182HSZ5   A0A182LU24   W5JL22   A0A182VXD8   A0A182FT44   A0A182RA10   B0WAG7   A0A1B0D5S1   D6WP56   A0A232EG34   Q9VHE0   Q3ZZY0   B3M058   B4PUN4   B4HKD9   B3NZS5   B4N8V9   B4GP60   A0A1W4VPF3   B4QWM6   B4JEL0   A0A3B0KC46   Q29BM1   A0A0L0CLP5   A0A2R7WII9   A0A0M3QYI7   B4LW19   A0A1J1HJW7   B4K4Z7   W8ANQ1   A0A0K8UYQ1   F4WYR4   A0A0P4VG60   E2BHQ9   A0A1W4XC12   A0A182SZK2   A0A182XI12   N6TPZ0   A0A1S3DH63   A0A0L7R457   A0A1D2NHZ0   A0A1B0CQ52   A0A0K8V6N9   A0A0K8URQ7   A0A1C9TAA8   A0A0P4W2I0   A0A1Q3FHU4   A0A2P8YPD0   A0A0P5JH38   A0A182QFP7   A0A0J7L252   E9G6Z1  

Pubmed

26354079    22118469    28756777    20075255    25315136    24845553    + More
25401762    26823975    20798317    25830018    25348373    24508170    30249741    17510324    26483478    25244985    24438588    12364791    14747013    17210077    20920257    23761445    18362917    19820115    28648823    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17074048    17994087    17550304    15632085    26108605    24495485    21719571    27129103    23537049    27289101    29403074    21292972   

EMBL

NWSH01003255    PCG66676.1    ODYU01008408    SOQ51983.1    KQ460045    KPJ18025.1    + More
KQ459324    KPJ01474.1    AGBW02008295    OWR53801.1    KZ150247    PZC71864.1    MF373406    AWK21960.1    GEDC01025583    JAS11715.1    KQ435756    KOX75883.1    GBYB01008421    GBYB01008422    GBYB01008423    JAG78188.1    JAG78189.1    JAG78190.1    KK853897    KDQ71519.1    CCAG010009890    GEBQ01022456    JAT17521.1    KQ434809    KZC06538.1    GDHF01022775    GDHF01020534    JAI29539.1    JAI31780.1    KZ288229    PBC31709.1    GBHO01023620    GDHC01000814    JAG19984.1    JAQ17815.1    KQ981727    KYN37219.1    GL436635    EFN71681.1    GBXI01005567    JAD08725.1    KQ760329    OAD60870.1    KQ979425    KYN21612.1    KQ977565    KYN01978.1    KQ976508    KYM82743.1    KQ982298    KYQ58126.1    AJWK01014097    GAKP01013082    JAC45870.1    KK107366    QOIP01000014    EZA51863.1    RLU15134.1    GGMS01004534    MBY73737.1    CH477437    EAT40927.1    JXUM01098717    JXUM01103756    KQ564831    KQ564442    KXJ71681.1    KXJ72260.1    ATLV01026020    KE525405    KFB52777.1    AAAB01008859    EAA08170.2    APCN01000376    AXCM01000493    ADMH02001133    ETN63998.1    DS231872    EDS41390.1    AJVK01025559    KQ971352    EFA07264.1    NNAY01004869    OXU17320.1    AE014297    BT024313    AAF54374.1    ABC86375.1    AJ920331    CAI72673.1    CH902617    EDV42015.1    CM000160    EDW96651.1    CH480815    EDW42889.1    CH954181    EDV49785.1    CH964232    EDW81560.2    CH479186    EDW38943.1    CM000364    EDX13630.1    CH916369    EDV93141.1    OUUW01000005    SPP81178.1    CM000070    EAL26976.3    JRES01000228    KNC33181.1    KK854883    PTY19467.1    CP012526    ALC47689.1    CH940650    EDW66524.2    CVRI01000006    CRK88335.1    CH933806    EDW13968.2    GAMC01018928    JAB87627.1    GDHF01020522    JAI31792.1    GL888463    EGI60568.1    GDKW01003464    JAI53131.1    GL448324    EFN84742.1    APGK01025935    KB740605    KB632095    ENN80063.1    ERL88733.1    KQ414658    KOC65633.1    LJIJ01000040    ODN04596.1    AJWK01023079    GDHF01017763    JAI34551.1    GDHF01022942    JAI29372.1    KU681449    AOR07230.1    GDRN01094209    JAI59748.1    GFDL01007927    JAV27118.1    PYGN01000452    PSN46117.1    GDIQ01202586    JAK49139.1    AXCN02000116    LBMM01001307    KMQ96539.1    GL732534    EFX84367.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000002358    UP000053105    + More
UP000095301    UP000005203    UP000027135    UP000092443    UP000078200    UP000092444    UP000092445    UP000076502    UP000095300    UP000242457    UP000078541    UP000000311    UP000078492    UP000078542    UP000078540    UP000075809    UP000092461    UP000053097    UP000279307    UP000008820    UP000069940    UP000249989    UP000091820    UP000075880    UP000076408    UP000030765    UP000075885    UP000075903    UP000075881    UP000075902    UP000007062    UP000075840    UP000075883    UP000000673    UP000075920    UP000069272    UP000075900    UP000002320    UP000092462    UP000007266    UP000215335    UP000000803    UP000007801    UP000002282    UP000001292    UP000008711    UP000007798    UP000008744    UP000192221    UP000000304    UP000001070    UP000268350    UP000001819    UP000037069    UP000092553    UP000008792    UP000183832    UP000009192    UP000007755    UP000008237    UP000192223    UP000075901    UP000076407    UP000019118    UP000030742    UP000079169    UP000053825    UP000094527    UP000245037    UP000075886    UP000036403    UP000000305   

PRIDE

Q9VHE0    Q3ZZY0   

Pfam

PF07885   Ion_trans_2        + More
PF00091   Tubulin
PF03953   Tubulin_C
PF04791   LMBR1

Interpro

IPR003280   2pore_dom_K_chnl        + More
IPR013099   K_chnl_dom       
IPR003092   2pore_dom_K_chnl_TASK       
IPR002453   Beta_tubulin       
IPR037103   Tubulin/FtsZ_C_sf       
IPR008280   Tub_FtsZ_C       
IPR003008   Tubulin_FtsZ_GTPase       
IPR017975   Tubulin_CS       
IPR036525   Tubulin/FtsZ_GTPase_sf       
IPR018316   Tubulin/FtsZ_2-layer-sand-dom       
IPR000217   Tubulin       
IPR023123   Tubulin_C       
IPR006876   LMBR1-like_membr_prot       

SUPFAM

SSF52490   SSF52490        + More
SSF55307   SSF55307       

Gene 3D

1.10.287.600     3.30.1330.20     3.40.50.1440    

ProteinModelPortal

A0A2A4J4L4   A0A2H1WFY8   A0A194RL23   A0A194Q7V6   A0A212FJ93   A0A2W1BDJ7   + More
A0A2S1ZBF1   A0A1B6CEA1   K7IR70   A0A0M9A4P6   A0A0C9R6I7   A0A1I8MRJ4   A0A088A5T7   A0A067QGT3   A0A1A9YRD9   A0A1A9UYZ4   A0A1B0FFP9   A0A1B6L1K7   A0A1A9Z9N2   A0A154P5R5   A0A0K8UZP6   A0A1I8PKQ8   A0A2A3EKK6   A0A0A9XJ12   A0A195FB09   E2A4D4   A0A0A1XCQ6   A0A310SPY7   A0A151J9F5   A0A195CMP3   A0A151I2T9   A0A151XCK4   A0A1B0GIG7   A0A034VVK3   A0A026W797   A0A2S2Q7N3   A0A1S4FGL8   Q172H0   A0A182H1K4   A0A1A9WY63   A0A182IX12   A0A182XWW9   A0A084WRD3   A0A182PAE7   A0A182UZZ3   A0A182JRI2   A0A182UJZ1   Q7QC61   A0A182HSZ5   A0A182LU24   W5JL22   A0A182VXD8   A0A182FT44   A0A182RA10   B0WAG7   A0A1B0D5S1   D6WP56   A0A232EG34   Q9VHE0   Q3ZZY0   B3M058   B4PUN4   B4HKD9   B3NZS5   B4N8V9   B4GP60   A0A1W4VPF3   B4QWM6   B4JEL0   A0A3B0KC46   Q29BM1   A0A0L0CLP5   A0A2R7WII9   A0A0M3QYI7   B4LW19   A0A1J1HJW7   B4K4Z7   W8ANQ1   A0A0K8UYQ1   F4WYR4   A0A0P4VG60   E2BHQ9   A0A1W4XC12   A0A182SZK2   A0A182XI12   N6TPZ0   A0A1S3DH63   A0A0L7R457   A0A1D2NHZ0   A0A1B0CQ52   A0A0K8V6N9   A0A0K8URQ7   A0A1C9TAA8   A0A0P4W2I0   A0A1Q3FHU4   A0A2P8YPD0   A0A0P5JH38   A0A182QFP7   A0A0J7L252   E9G6Z1  

PDB

6CQ9     E-value=5.6308e-26,     Score=291

KEGG

101738960    K04919 potassium channel subfamily K member 9 | (RefSeq) potassium channel subfamily K member 9-like

GO

GO:0005267   GO:0016021   GO:0030322   GO:0022841   GO:0071805   GO:0005887   GO:0046982   GO:0005200   GO:0003924   GO:0005525   GO:0005874   GO:0007017   GO:0016020   GO:0005524   GO:0006418   GO:0004818   GO:0005737   GO:0006424   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR11588  

Subcellular location

Membrane  

SignalP

Position:   1 - 23,         Likelihood:  0.607344

 

 

Length:

329

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

125.8867

Exp number, first 60 AAs:

20.40217

Total prob of N-in:

0.99905

POSSIBLE N-term signal

sequence

inside

1  -  8

TMhelix

9  -  26

outside

27  -  79

TMhelix

80  -  102

inside

103  -  108

TMhelix

109  -  128

outside

129  -  158

TMhelix

159  -  178

inside

179  -  189

TMhelix

190  -  207

outside

208  -  221

TMhelix

222  -  244

inside

245  -  329

 

 

Pi

230.051346

Theta

156.33544

Tajima's D

0.873382

CLR

0.459751

CSRT

0.626218689065547

Interpretation

Uncertain