Pre Gene Modal
BGIBMGA005118
Annotation
PREDICTED:_ribosomal_RNA_processing_protein_36_homolog_[Amyelois_transitella]
Full name
Ribosomal RNA processing protein 36 homolog
Location in the cell
Nuclear Reliability : 4.03
Sequence
CDS
ATGAGCTGCAGTGAAGATAATGAAGATTCTCATGTGGACGAAATTGAAGACAACGAAAGGACGTCAATACGATCAGAATTGGCTTCCTTATCTTTTGAAGAACTTCAACAATTGAAGGAAAAAATTGGAGCTAAAGTCTACAAAGAGGCATTGTTTGGAACTAAAGAAAAAGTAAACGTTCCGCCTAAAGTGTTCAAAAGAGAAAACAAAAACAGACCAAGAGAAATCAGTTCAAAGAAACCAGTGCCAGTAGTTCAGGTTGCACATGTGAAGAAGAAAGAAGTAAGAGACCCAAGGTTTGACCCATTATGTGGAGAATTTGATAAGAAGCAATTTTCACAGAATTATGGTTTTCTGTCTGAACTTCGTATGAAAGATATTAAGGCTGCTAGACAAGAACTGAGAGAAACAACTGATCCAGAGAAACAAATAAAATTACGTAGATTATTGCAAAGATTGAATGATCAGCATAAAGCATGCAAAAGAAACAAGTTGGACAGAGAAGTTGCACAAAAGAATAGAGATGATATTGAAAAGCAATTCCGTGAGGGCAAACAGCCACACTTCAAGAACAAATCTGAACTACGTGTAGAAGCTTTGGTTAAGCAATATGAAAGTCTGAAAAACGAAGGAACTAGCCGTGTGCAGCGACACTTGAAGCGAAGAGAACAAAAAATGAAGAAACGATCACATAGAGCACCTGCTAGAGTTAAATAA
Protein
MSCSEDNEDSHVDEIEDNERTSIRSELASLSFEELQQLKEKIGAKVYKEALFGTKEKVNVPPKVFKRENKNRPREISSKKPVPVVQVAHVKKKEVRDPRFDPLCGEFDKKQFSQNYGFLSELRMKDIKAARQELRETTDPEKQIKLRRLLQRLNDQHKACKRNKLDREVAQKNRDDIEKQFREGKQPHFKNKSELRVEALVKQYESLKNEGTSRVQRHLKRREQKMKKRSHRAPARVK
Summary
Description
Involved in the early processing steps of the pre-rRNA in the maturation pathway leading to the 18S rRNA.
Similarity
Belongs to the RRP36 family.
Keywords
Complete proteome
Nucleus
Reference proteome
Ribosome biogenesis
rRNA processing
Feature
chain Ribosomal RNA processing protein 36 homolog
Uniprot
H9J6H6
A0A2W1B7H5
A0A2A4J592
A0A2H1X124
A0A1E1WLV3
A0A194RKR8
+ More
A0A194Q937 S4PLU3 A0A212FJ94 A0A1Y1KGR2 A0A154P3R8 A0A0L7QM94 E2AIY9 A0A0M9A5T7 A0A087ZT93 A0A3L8D3V5 A0A0J7LAZ9 E9IN57 A0A026W5C7 E2BSM1 A0A232FIL7 F4WIY2 A0A151I5K4 A0A158NMP0 A0A3B0JG37 A0A151X187 A0A195FEE1 A0A2A3E3I0 A0A0T6B8E3 A0A195E1W6 W8CE31 A0A2J7RP99 A0A195CMV5 A0A0M3QYG8 A0A067RTL7 A0A0A1WNR7 A0A034WJK5 B4K8N9 Q29AH5 A0A1B6CNM8 A0A0K8W198 A0A240SX69 B4G5Z1 D6WR63 B3LVW4 B4LYJ5 D3TRQ5 A0A3B0JGQ8 N6T510 B4JTL9 B4N935 A0A2P8Y8M1 A0A0L7KU48 A0A240SXH1 A0A1B6F4P3 A0A1B6KTL1 A0A1L8DRE3 A0A1I8MXE3 A0A1B6HJH9 E9G7U9 W4XTD4 A0A0R1E8E1 B3P3K1 Q9VFJ1 A0A1B0G861 A0A1A9VR10 B4PSS8 B4QZU4 A0A2J7RPA5 A0A226EXJ1 A0A1I8NP28 B4HEM6 A0A1B0EYD7 A0A1W4V527 A0A293M3H8 A0A2R5LKA1 A0A2B4RGF2 A0A3M6TYW7 A0A131YNZ5 C3ZKP2 A0A1Z5L6U5 A0A182W2Q8 A0A0P6BN09 A0A131XM30 A0A1A9XI32 A7SL20 B7Q5G9 A0A224Z6X5 A0A131XVI3 V5I448 A0A2S2N7W7 A0A1S3DUT5 A0A084WA23 A0A1S3JXW1 R7UUQ7 A0A182RYA0 A0A182JJT8 A0A1A7XM53 A0A1A7XXT9
A0A194Q937 S4PLU3 A0A212FJ94 A0A1Y1KGR2 A0A154P3R8 A0A0L7QM94 E2AIY9 A0A0M9A5T7 A0A087ZT93 A0A3L8D3V5 A0A0J7LAZ9 E9IN57 A0A026W5C7 E2BSM1 A0A232FIL7 F4WIY2 A0A151I5K4 A0A158NMP0 A0A3B0JG37 A0A151X187 A0A195FEE1 A0A2A3E3I0 A0A0T6B8E3 A0A195E1W6 W8CE31 A0A2J7RP99 A0A195CMV5 A0A0M3QYG8 A0A067RTL7 A0A0A1WNR7 A0A034WJK5 B4K8N9 Q29AH5 A0A1B6CNM8 A0A0K8W198 A0A240SX69 B4G5Z1 D6WR63 B3LVW4 B4LYJ5 D3TRQ5 A0A3B0JGQ8 N6T510 B4JTL9 B4N935 A0A2P8Y8M1 A0A0L7KU48 A0A240SXH1 A0A1B6F4P3 A0A1B6KTL1 A0A1L8DRE3 A0A1I8MXE3 A0A1B6HJH9 E9G7U9 W4XTD4 A0A0R1E8E1 B3P3K1 Q9VFJ1 A0A1B0G861 A0A1A9VR10 B4PSS8 B4QZU4 A0A2J7RPA5 A0A226EXJ1 A0A1I8NP28 B4HEM6 A0A1B0EYD7 A0A1W4V527 A0A293M3H8 A0A2R5LKA1 A0A2B4RGF2 A0A3M6TYW7 A0A131YNZ5 C3ZKP2 A0A1Z5L6U5 A0A182W2Q8 A0A0P6BN09 A0A131XM30 A0A1A9XI32 A7SL20 B7Q5G9 A0A224Z6X5 A0A131XVI3 V5I448 A0A2S2N7W7 A0A1S3DUT5 A0A084WA23 A0A1S3JXW1 R7UUQ7 A0A182RYA0 A0A182JJT8 A0A1A7XM53 A0A1A7XXT9
Pubmed
19121390
28756777
26354079
23622113
22118469
28004739
+ More
20798317 30249741 21282665 24508170 28648823 21719571 21347285 24495485 24845553 25830018 25348373 17994087 15632085 18362917 19820115 20353571 23537049 29403074 26227816 25315136 21292972 17550304 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 30382153 26830274 18563158 28528879 28049606 17615350 28797301 25765539 24438588 23254933
20798317 30249741 21282665 24508170 28648823 21719571 21347285 24495485 24845553 25830018 25348373 17994087 15632085 18362917 19820115 20353571 23537049 29403074 26227816 25315136 21292972 17550304 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 30382153 26830274 18563158 28528879 28049606 17615350 28797301 25765539 24438588 23254933
EMBL
BABH01019741
KZ150247
PZC71859.1
NWSH01003255
PCG66684.1
ODYU01012628
+ More
SOQ59045.1 GDQN01003099 JAT87955.1 KQ460045 KPJ18019.1 KQ459324 KPJ01480.1 GAIX01000406 JAA92154.1 AGBW02008295 OWR53804.1 GEZM01086311 GEZM01086310 JAV59561.1 KQ434809 KZC06497.1 KQ414894 KOC59742.1 GL439921 EFN66578.1 KQ435736 KOX77066.1 QOIP01000014 RLU14904.1 LBMM01000091 KMR05008.1 GL764276 EFZ17995.1 KK107405 EZA51203.1 GL450241 EFN81267.1 NNAY01000174 OXU30309.1 GL888178 EGI65845.1 KQ976431 KYM87630.1 ADTU01020649 OUUW01000005 SPP81354.1 KQ982588 KYQ54145.1 KQ981656 KYN38572.1 KZ288428 PBC25852.1 LJIG01009430 KRT83095.1 KQ979776 KYN19135.1 GAMC01000906 JAC05650.1 NEVH01001403 PNF42665.1 KQ977532 KYN02076.1 CP012526 ALC47653.1 KK852425 KDR24145.1 GBXI01013805 JAD00487.1 GAKP01003226 JAC55726.1 CH933806 EDW15458.1 CM000070 EAL27375.3 GEDC01022280 JAS15018.1 GDHF01007453 JAI44861.1 CH479179 EDW23923.1 KQ971354 EFA06004.1 CH902617 EDV41497.1 CH940650 EDW68015.1 EZ424107 ADD20383.1 SPP81355.1 APGK01052460 KB741212 KB631580 ENN72733.1 ERL84461.1 CH916374 EDV91448.1 CH964232 EDW81582.1 PYGN01000804 PSN40599.1 JTDY01005645 KOB66788.1 JXJN01015477 GECZ01024708 JAS45061.1 GEBQ01025210 JAT14767.1 GFDF01005140 JAV08944.1 GECU01032888 GECU01001199 JAS74818.1 JAT06508.1 GL732534 EFX84596.1 AAGJ04105363 AAGJ04105364 AAGJ04105365 CM000160 KRK03844.1 CH954181 EDV48889.1 AE014297 AY061371 AAF55064.2 AAL28919.1 CCAG010000199 EDW97574.1 CM000364 EDX12942.1 PNF42666.1 LNIX01000001 OXA61794.1 CH480815 EDW42183.1 AJVK01059970 GFWV01010575 MAA35304.1 GGLE01005732 MBY09858.1 LSMT01000473 PFX17444.1 RCHS01002654 RMX46582.1 GEDV01007554 JAP81003.1 GG666638 EEN46891.1 GFJQ02004042 JAW02928.1 GDIP01027264 JAM76451.1 GEFH01001169 JAP67412.1 DS469694 ABJB010067004 ABJB010299224 DS861322 EEC14091.1 GFPF01011397 MAA22543.1 GEFM01006120 JAP69676.1 GANP01001565 JAB82903.1 GGMR01000423 MBY13042.1 ATLV01022010 KE525327 KFB47067.1 AMQN01022141 KB299693 ELU07657.1 HADW01017510 SBP18910.1 HADX01000616 SBP22848.1
SOQ59045.1 GDQN01003099 JAT87955.1 KQ460045 KPJ18019.1 KQ459324 KPJ01480.1 GAIX01000406 JAA92154.1 AGBW02008295 OWR53804.1 GEZM01086311 GEZM01086310 JAV59561.1 KQ434809 KZC06497.1 KQ414894 KOC59742.1 GL439921 EFN66578.1 KQ435736 KOX77066.1 QOIP01000014 RLU14904.1 LBMM01000091 KMR05008.1 GL764276 EFZ17995.1 KK107405 EZA51203.1 GL450241 EFN81267.1 NNAY01000174 OXU30309.1 GL888178 EGI65845.1 KQ976431 KYM87630.1 ADTU01020649 OUUW01000005 SPP81354.1 KQ982588 KYQ54145.1 KQ981656 KYN38572.1 KZ288428 PBC25852.1 LJIG01009430 KRT83095.1 KQ979776 KYN19135.1 GAMC01000906 JAC05650.1 NEVH01001403 PNF42665.1 KQ977532 KYN02076.1 CP012526 ALC47653.1 KK852425 KDR24145.1 GBXI01013805 JAD00487.1 GAKP01003226 JAC55726.1 CH933806 EDW15458.1 CM000070 EAL27375.3 GEDC01022280 JAS15018.1 GDHF01007453 JAI44861.1 CH479179 EDW23923.1 KQ971354 EFA06004.1 CH902617 EDV41497.1 CH940650 EDW68015.1 EZ424107 ADD20383.1 SPP81355.1 APGK01052460 KB741212 KB631580 ENN72733.1 ERL84461.1 CH916374 EDV91448.1 CH964232 EDW81582.1 PYGN01000804 PSN40599.1 JTDY01005645 KOB66788.1 JXJN01015477 GECZ01024708 JAS45061.1 GEBQ01025210 JAT14767.1 GFDF01005140 JAV08944.1 GECU01032888 GECU01001199 JAS74818.1 JAT06508.1 GL732534 EFX84596.1 AAGJ04105363 AAGJ04105364 AAGJ04105365 CM000160 KRK03844.1 CH954181 EDV48889.1 AE014297 AY061371 AAF55064.2 AAL28919.1 CCAG010000199 EDW97574.1 CM000364 EDX12942.1 PNF42666.1 LNIX01000001 OXA61794.1 CH480815 EDW42183.1 AJVK01059970 GFWV01010575 MAA35304.1 GGLE01005732 MBY09858.1 LSMT01000473 PFX17444.1 RCHS01002654 RMX46582.1 GEDV01007554 JAP81003.1 GG666638 EEN46891.1 GFJQ02004042 JAW02928.1 GDIP01027264 JAM76451.1 GEFH01001169 JAP67412.1 DS469694 ABJB010067004 ABJB010299224 DS861322 EEC14091.1 GFPF01011397 MAA22543.1 GEFM01006120 JAP69676.1 GANP01001565 JAB82903.1 GGMR01000423 MBY13042.1 ATLV01022010 KE525327 KFB47067.1 AMQN01022141 KB299693 ELU07657.1 HADW01017510 SBP18910.1 HADX01000616 SBP22848.1
Proteomes
UP000005204
UP000218220
UP000053240
UP000053268
UP000007151
UP000076502
+ More
UP000053825 UP000000311 UP000053105 UP000005203 UP000279307 UP000036403 UP000053097 UP000008237 UP000215335 UP000007755 UP000078540 UP000005205 UP000268350 UP000075809 UP000078541 UP000242457 UP000078492 UP000235965 UP000078542 UP000092553 UP000027135 UP000009192 UP000001819 UP000092445 UP000008744 UP000007266 UP000007801 UP000008792 UP000019118 UP000030742 UP000001070 UP000007798 UP000245037 UP000037510 UP000092460 UP000095301 UP000000305 UP000007110 UP000002282 UP000008711 UP000000803 UP000092444 UP000078200 UP000000304 UP000198287 UP000095300 UP000001292 UP000092462 UP000192221 UP000225706 UP000275408 UP000001554 UP000075920 UP000092443 UP000001593 UP000001555 UP000079169 UP000030765 UP000085678 UP000014760 UP000075900 UP000075880
UP000053825 UP000000311 UP000053105 UP000005203 UP000279307 UP000036403 UP000053097 UP000008237 UP000215335 UP000007755 UP000078540 UP000005205 UP000268350 UP000075809 UP000078541 UP000242457 UP000078492 UP000235965 UP000078542 UP000092553 UP000027135 UP000009192 UP000001819 UP000092445 UP000008744 UP000007266 UP000007801 UP000008792 UP000019118 UP000030742 UP000001070 UP000007798 UP000245037 UP000037510 UP000092460 UP000095301 UP000000305 UP000007110 UP000002282 UP000008711 UP000000803 UP000092444 UP000078200 UP000000304 UP000198287 UP000095300 UP000001292 UP000092462 UP000192221 UP000225706 UP000275408 UP000001554 UP000075920 UP000092443 UP000001593 UP000001555 UP000079169 UP000030765 UP000085678 UP000014760 UP000075900 UP000075880
Pfam
PF06102 RRP36
Interpro
IPR009292
RRP36
ProteinModelPortal
H9J6H6
A0A2W1B7H5
A0A2A4J592
A0A2H1X124
A0A1E1WLV3
A0A194RKR8
+ More
A0A194Q937 S4PLU3 A0A212FJ94 A0A1Y1KGR2 A0A154P3R8 A0A0L7QM94 E2AIY9 A0A0M9A5T7 A0A087ZT93 A0A3L8D3V5 A0A0J7LAZ9 E9IN57 A0A026W5C7 E2BSM1 A0A232FIL7 F4WIY2 A0A151I5K4 A0A158NMP0 A0A3B0JG37 A0A151X187 A0A195FEE1 A0A2A3E3I0 A0A0T6B8E3 A0A195E1W6 W8CE31 A0A2J7RP99 A0A195CMV5 A0A0M3QYG8 A0A067RTL7 A0A0A1WNR7 A0A034WJK5 B4K8N9 Q29AH5 A0A1B6CNM8 A0A0K8W198 A0A240SX69 B4G5Z1 D6WR63 B3LVW4 B4LYJ5 D3TRQ5 A0A3B0JGQ8 N6T510 B4JTL9 B4N935 A0A2P8Y8M1 A0A0L7KU48 A0A240SXH1 A0A1B6F4P3 A0A1B6KTL1 A0A1L8DRE3 A0A1I8MXE3 A0A1B6HJH9 E9G7U9 W4XTD4 A0A0R1E8E1 B3P3K1 Q9VFJ1 A0A1B0G861 A0A1A9VR10 B4PSS8 B4QZU4 A0A2J7RPA5 A0A226EXJ1 A0A1I8NP28 B4HEM6 A0A1B0EYD7 A0A1W4V527 A0A293M3H8 A0A2R5LKA1 A0A2B4RGF2 A0A3M6TYW7 A0A131YNZ5 C3ZKP2 A0A1Z5L6U5 A0A182W2Q8 A0A0P6BN09 A0A131XM30 A0A1A9XI32 A7SL20 B7Q5G9 A0A224Z6X5 A0A131XVI3 V5I448 A0A2S2N7W7 A0A1S3DUT5 A0A084WA23 A0A1S3JXW1 R7UUQ7 A0A182RYA0 A0A182JJT8 A0A1A7XM53 A0A1A7XXT9
A0A194Q937 S4PLU3 A0A212FJ94 A0A1Y1KGR2 A0A154P3R8 A0A0L7QM94 E2AIY9 A0A0M9A5T7 A0A087ZT93 A0A3L8D3V5 A0A0J7LAZ9 E9IN57 A0A026W5C7 E2BSM1 A0A232FIL7 F4WIY2 A0A151I5K4 A0A158NMP0 A0A3B0JG37 A0A151X187 A0A195FEE1 A0A2A3E3I0 A0A0T6B8E3 A0A195E1W6 W8CE31 A0A2J7RP99 A0A195CMV5 A0A0M3QYG8 A0A067RTL7 A0A0A1WNR7 A0A034WJK5 B4K8N9 Q29AH5 A0A1B6CNM8 A0A0K8W198 A0A240SX69 B4G5Z1 D6WR63 B3LVW4 B4LYJ5 D3TRQ5 A0A3B0JGQ8 N6T510 B4JTL9 B4N935 A0A2P8Y8M1 A0A0L7KU48 A0A240SXH1 A0A1B6F4P3 A0A1B6KTL1 A0A1L8DRE3 A0A1I8MXE3 A0A1B6HJH9 E9G7U9 W4XTD4 A0A0R1E8E1 B3P3K1 Q9VFJ1 A0A1B0G861 A0A1A9VR10 B4PSS8 B4QZU4 A0A2J7RPA5 A0A226EXJ1 A0A1I8NP28 B4HEM6 A0A1B0EYD7 A0A1W4V527 A0A293M3H8 A0A2R5LKA1 A0A2B4RGF2 A0A3M6TYW7 A0A131YNZ5 C3ZKP2 A0A1Z5L6U5 A0A182W2Q8 A0A0P6BN09 A0A131XM30 A0A1A9XI32 A7SL20 B7Q5G9 A0A224Z6X5 A0A131XVI3 V5I448 A0A2S2N7W7 A0A1S3DUT5 A0A084WA23 A0A1S3JXW1 R7UUQ7 A0A182RYA0 A0A182JJT8 A0A1A7XM53 A0A1A7XXT9
Ontologies
GO
PANTHER
Topology
Subcellular location
Length:
238
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.09120
outside
1 - 238
Population Genetic Test Statistics
Pi
149.116294
Theta
171.063791
Tajima's D
-0.35404
CLR
250.570795
CSRT
0.27983600819959
Interpretation
Uncertain
