Gene

KWMTBOMO15354

Pre Gene Modal

BGIBMGA005078

Annotation

PREDICTED:_uncharacterized_protein_LOC106129042_[Amyelois_transitella]

Location

Bomo_Chr25(+):9993007-10009275      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.17

CDS

ATGGATTCAAAACTCGTGATTATTATTGTACTCGGCTCTTATTCGTACGGATTCCAGTACGACGGTCTCCGGGTAAAATTCGGCTGGTCAGACGCCCTGGCGGACATCGAATACTTCTACAGCATACCGCGCACCATAAAGGATGCAGAAAATGACGGTTGGCGCAGGACTGAACCACCGCCGGGACCTATTCTCGAGTTAAGGATGTACTGTCCTCCGGGAAGGGTTGTCTGCCCACTATACGATACTTCAGGCTTCGTTGCCGGCTTGCAAATAGCTATTCCGGTCGACGAGTTTGAATCTTCTGTTATCAAGCCCGAGAAAAAGTTCGTGAAATGGTACGCTGCTCCCGCGGAAGGAGAACCCTCTAGGGACTATTGGACAGCCACTCAATACTATGTGTCAGAAGAATCTCTGAAGGCCGGAGCCGGTCCACAAATAGAAAACGGAGCTACATTGCAGGACGGTGGAGTGTGGGTCGCCGGACCAGACGCTCACCTTCTCCGAATCCCCACTACAGAAGCTGAACTAAACAGCACTTTCTTCAAAAAACAGAATTGCATCCCTAACATGGGCACACACTATTACTACAACATGACAAGAAAAATGGACTGCGAAGAAATGCTACTGTGGTTCGCATTAATCACGGACAGCGAACTGGTTGGCACCGGCTTTCAGACCATAGGGAAACTAAACAAGAAAAATCTGAAAGATCGAAACTGGTTTGAAACAGTTCCAGGGGCCAGACGAGCAACAGAGCTGGCAATACCACACGCCCCTGACTGCCTACGAGATTGGACGGAAAAGTACGGCGTTATATCAATGCACATCTACTACACGAATAAACCTTGGGAAATTCGTTGCAAGTCCGGTGATTCCATAAAGCCAGGTCCACCCCTGGACAGACTGATACTCAACGGCTTGCGATACGCCAACCAAATTTCCGATGAAGTTCAAAAATTATTCAGCGGTTAA

Protein

MDSKLVIIIVLGSYSYGFQYDGLRVKFGWSDALADIEYFYSIPRTIKDAENDGWRRTEPPPGPILELRMYCPPGRVVCPLYDTSGFVAGLQIAIPVDEFESSVIKPEKKFVKWYAAPAEGEPSRDYWTATQYYVSEESLKAGAGPQIENGATLQDGGVWVAGPDAHLLRIPTTEAELNSTFFKKQNCIPNMGTHYYYNMTRKMDCEEMLLWFALITDSELVGTGFQTIGKLNKKNLKDRNWFETVPGARRATELAIPHAPDCLRDWTEKYGVISMHIYYTNKPWEIRCKSGDSIKPGPPLDRLILNGLRYANQISDEVQKLFSG

Uniprot

A0A2W1B5C2   A0A2A4J2K5   A0A2A4J3S8   A0A3S2NU35   A0A2H1WZI2   A0A212F8Y2   + More
A0A194Q7G6   A0A194RPR4   A0A194RJL1   A0A348ARE3   A0A3S2TNL4   A0A212F8X0   A0A194RKF0   A0A2A4J3W2   A0A2W1BGD7   A0A1D1ZDW1   A0A2H1X436   A0A2W1B0B8   A0A2K8JLE3   A0A2A4J3P8   B1NLD7   A0A1B6JCM2   A0A1B6IQ33   A0A1B6IGV1   A0A1B6GB43   A0A1I8GH03   A0A1I8ITE8   A0A1I8HZZ2   A0A0A9XW04   A0A1B6J7C4   A0A1B6F1Y6   T1IXM1   V4C0Z0   A0A2H1WZU4   C3Y5T8   T1J4X8   A0A1B6IFE9   A0A1B6HME0   A0A1B6C587   A0A1B6M4P8   C3Y5U1   A0A3G9CLZ2   A0A226F2U4   A0A1D2N6X1   A0A226E1C8   T1JA23   A0A0L8HWF2   V4ADY4   A0A226ERP2   A0A1D2NIT9   A0A1B6EIU0   A0A226F3Q4   A0A1S3JDE4   A0A1S3IAF0   T1ISJ9   C3Y5U4   A0A210R5Y3   C3Y5U2   A0A3S1C4G9   A0A210R159  

Pubmed

28756777    22118469    26354079    18314941    26392545    25401762    + More
23254933    18563158    26279640    27289101    28812685   

EMBL

KZ150517    PZC70621.1    NWSH01003566    PCG66099.1    PCG66100.1    RSAL01000193    + More
RVE44600.1    ODYU01012270    SOQ58485.1    AGBW02009658    OWR50181.1    KQ459324    KPJ01482.1    KQ460045    KPJ18016.1    KPJ18018.1    LC259005    BBC08867.1    RSAL01000041    RVE50941.1    OWR50182.1    KPJ18017.1    NWSH01003255    PCG66681.1    KZ150247    PZC71860.1    GDJX01002923    JAT65013.1    ODYU01013295    SOQ60002.1    PZC70622.1    PZC71857.1    MF683358    ATU82499.1    PCG66685.1    EF600052    ABU98617.1    GECU01010695    JAS97011.1    GECU01018658    JAS89048.1    GECU01021560    JAS86146.1    GECZ01010118    JAS59651.1    NIVC01002056    PAA61235.1    NIVC01002351    PAA58643.1    GBHO01018617    JAG24987.1    GECU01012642    JAS95064.1    GECZ01025473    JAS44296.1    AFFK01020108    KB201701    ESO95124.1    SOQ58486.1    GG666487    EEN64335.1    JH431850    GECU01022084    JAS85622.1    GECU01031895    JAS75811.1    GEDC01028620    JAS08678.1    GEBQ01009076    JAT30901.1    EEN64338.1    FX983003    BAS30471.1    LNIX01000001    OXA63670.1    LJIJ01000185    ODN00825.1    LNIX01000008    OXA51100.1    JH431981    KQ417141    KOF93542.1    KB201931    ESO93325.1    LNIX01000002    OXA59724.1    LJIJ01000029    ODN05174.1    GECZ01031926    JAS37843.1    OXA63990.1    JH431434    EEN64341.1    NEDP02000192    OWF56459.1    EEN64339.1    RQTK01000274    RUS82736.1    NEDP02000926    OWF54729.1   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053268    UP000053240    UP000095280    + More
UP000215902    UP000030746    UP000001554    UP000198287    UP000094527    UP000053454    UP000085678    UP000242188    UP000271974   

Pfam

PF00587   tRNA-synt_2b        + More
PF03129   HGTP_anticodon
PF00458   WHEP-TRS
PF09180   ProRS-C_1
PF03357   Snf7
PF10274   ParcG

Interpro

IPR036621   Anticodon-bd_dom_sf        + More
IPR002314   aa-tRNA-synt_IIb       
IPR009068   S15_NS1_RNA-bd       
IPR000738   WHEP-TRS_dom       
IPR016061   Pro-tRNA_ligase_II_C       
IPR006195   aa-tRNA-synth_II       
IPR004154   Anticodon-bd       
IPR017449   Pro-tRNA_synth_II       
IPR005024   Snf7_fam       
IPR019399   Parkin_co-regulated_protein       

SUPFAM

SSF64586   SSF64586        + More
SSF47060   SSF47060       

Gene 3D

3.30.110.30     3.40.50.800    

ProteinModelPortal

A0A2W1B5C2   A0A2A4J2K5   A0A2A4J3S8   A0A3S2NU35   A0A2H1WZI2   A0A212F8Y2   + More
A0A194Q7G6   A0A194RPR4   A0A194RJL1   A0A348ARE3   A0A3S2TNL4   A0A212F8X0   A0A194RKF0   A0A2A4J3W2   A0A2W1BGD7   A0A1D1ZDW1   A0A2H1X436   A0A2W1B0B8   A0A2K8JLE3   A0A2A4J3P8   B1NLD7   A0A1B6JCM2   A0A1B6IQ33   A0A1B6IGV1   A0A1B6GB43   A0A1I8GH03   A0A1I8ITE8   A0A1I8HZZ2   A0A0A9XW04   A0A1B6J7C4   A0A1B6F1Y6   T1IXM1   V4C0Z0   A0A2H1WZU4   C3Y5T8   T1J4X8   A0A1B6IFE9   A0A1B6HME0   A0A1B6C587   A0A1B6M4P8   C3Y5U1   A0A3G9CLZ2   A0A226F2U4   A0A1D2N6X1   A0A226E1C8   T1JA23   A0A0L8HWF2   V4ADY4   A0A226ERP2   A0A1D2NIT9   A0A1B6EIU0   A0A226F3Q4   A0A1S3JDE4   A0A1S3IAF0   T1ISJ9   C3Y5U4   A0A210R5Y3   C3Y5U2   A0A3S1C4G9   A0A210R159  

KEGG

101741041    no KO assigned | (RefSeq) uncharacterized LOC101741041

GO

GO:0005524   GO:0005737   GO:0004827   GO:0006433   GO:0016874   GO:0016021   GO:0007034  

Length:

324

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.00651

Exp number, first 60 AAs:

1.68964

Total prob of N-in:

0.10862

outside

1  -  324

 

 

Pi

20.392808

Theta

172.54481

Tajima's D

0.254616

CLR

0.735113

CSRT

0.44122793860307

Interpretation

Uncertain