SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15351  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005119
Annotation
PREDICTED:_balbiani_ring_protein_3_isoform_X2_[Bombyx_mori]
Location
Bomo_Chr25(-):9862665-9902966      View in EpiBrowser
Location in the cell
Extracellular   Reliability : 2.154 Nuclear   Reliability : 2.043
 

Sequence

CDS
ATGGGTTGCGACTATGGCTTCGAGCTCGGAGCCGGTCGTTGTCCGACTTGTAAATGCCGGGATCCTTGTTCAGGAGTGACGTGTCCGGCCGGTAGAGCCTGTGCCACAGTCGACGTCGCTTGTGACGCAGATTATTGTCCTCCCGTACCTGCATGTTTGCCAAAGAAATCCGGTCAGTGTCCATACTTAGTGCCTCAGAGCGGAGCGTGTGAGTGGTCGTGTCGGAGCGACGCCGAGTGCTCCGGGGGGGAGAGGTGCTGCGCCACCGGATGTGGGACTGCTTGTACGCAGCCCGTCCACCAGACAGCTTGCCAACAGAGAAGAGCTCTAGCGCTTCATACGGCCGCTGAAAGCGGAAACCCTCCCGCTTGGGCCTGGGTCCCGCAGTGTACGGAGGACGGTGCTTACCAAGAAGTTCAGTGCAGAAGATCTGACAAGACATGCTGGTGTGTCGATACTGCTGGTAACGAGATCCCCGGTACAAGAACTAGCAACTCCACACCGACTTGTGCCTCTCCAATCGAATGTCCGGAAACGAATTGCAATGACATTACCGCCTGTGCTCATGGACAAGAGCTGGACCGCAGAGGCTGTCCCACTTGTGAATGTAGGGACCCCTGCGCCGAAGCCAAGTGCAAACCTGATGAATCTTGCGAATTAGTGCCTTTGGATTGCGAGGGTGCAGTGTGTCCGCCGTTGGCTCGATGCGCGCCGTCCCTGCGGTGCCCGGACAGCACCACGCCGCTTGGAGCGCCGGACGGCTCAGGATCATTGATATGCGGACCTAACGCTGCGGCTTGTCCATCCACACACGCTTGCAGATTCGCCCCGCACGACTCTGGACCAAATGTTTGCTGCCCCAAGCCTCGTACCGTCTGCTTCGAGAGCAAAGACGAGGGTAATTGCACGGAGGGACAAGTGTTGAACACGACAAGATGGCACTTCAATCACGAGCGGAACAGATGCGAGAGGTTCCGCTACCACGGATGCAGCGGAAACCACAACAATTTCAGGACCAAGGACGAATGCAACGCCGTATGTCCCGTACTTAGTCCATGCGAAAGACTGCGAGAGAAAAACGAAGCGGCAGCACTGAAGTACGGAAAGGGCACCTTCATACCGGTTTGTGACGCCAGTGGCGCTTGGGAGCCAGTGCAGTGCATGTCGCATATCGATGTGTGTTGGTGCGTGAGCGCCCGCGGTGAGCCATTAAAAGGCTCTCTGGTACGAGGATCCAAGCCTTCCTGCAACTTCCGGCAGGCCCGTAAATGGATACAAAAAGACCCTTTCGATGAGAAAGCCAAAGCTGATGAAGTTCTAGAAGAGCTTATAAGACAAATGACCGCTTATCGAGTTGATGAATTTGAAGAAGACGATGCAGATTTAGATGAAGACTTAGCAGAAGCGAGGAGCACAGCGGATTTTGTCGACAAAGAAGCACAAAACGAAGAAGCCATACTCGTATCTGAATTTGTTGAGCCCAAACAGGCTTTAACCACCAGGAAAATGGATAGGCCACTAGTACTGGAGGAAAAGATTTCATTTAAAACGAAATGTCAGATGTTACAAGCAGAGATTGATAATGGATCGGAAGGGTATCGTCCCCGCTGCCTGTCGGACGGCTCGTTCTCTCCGCGCCAGTGCGTCCGCGGCAGGTGCTGGTGCGTGGACGCCGCCGGAGAGAGGAGACACCACGCCGGTCCAGTGCCTGATCTTCCCGCCCCTGATCCTTGTGAACGAACGCAAATAGAATCCGCTAAGCTCGAACTGAAGCTGATAGGCGTTGACGATTCAGTAGCTCAGCGCTCGTCGGGTGTACTGGCCGTAAAGTTGGCCGCGCTCGGCGCCCGCGTGCCCGTCTCCGTCACCAAGGACAGGGGGGCGACCCGGCTACGCGTGTCCCTGTATGGACCCAAGTCTGTCGACCGAGTCTATTATATCGAGAACCTGGTTCAACAAGAAAAGCTATCCAATAGCGATTCTGAAGATTCACTGAGAGCGGACGTTGTCAGTGCGGAGTACACATTGTCCTTGCCGACACCCGCCTTACAACAAAGAGAAATACTTAGTGAATCTACAGTGTCAGCGGCAACATCGTATCACACAGCGCTAATAGTCCTCGCAGCAACCTCAGCGTTCATCATCAGCATCCTCTGTGTACTCGTGATGTTATACCGAGCGAGACTACAGAGAGAGCCTCATAAAGCCGAGAGATTCCTTCCACCAGCTCCGCCAGTATATGTGCTCTCCGCTGACGAGAAAGCTGAACTTGCGAGGGTCTTGCACGCTCCACCACCCCCGATCCCGCCACAGAGTGACGATTCGAAAGAAGGCGGGCTCGCTTGTTGCGCCGTATGCAATCAAAAAACTCAAAGAAGATGCGCAAGATGCCTCAATATTTACTACTGTAATACGGAACATCAACGACAGGACTGGAAGAGACATAAAAGTGAATGTATACCCAAATTAACGAAGCAGCTTGCAAAAAGTGATAATTTTGGTGAATGTTCAACTGTTACCAAAGAAGCTGCTAAGGAAATTGGAAACATTGCTCAAAATTATCAGCATGATGTTACGAAAGTATGCAATGATGGTGATGTAAGACATTTAAAAAAGTCAAAGACTAAAAACGAAAAAAAAAGTGTTTCCGAGGGTAGTAGTGTTAGTAAACAAAATAAATTTGACTTCAAGAAAAACATACAACAAACACAAAACAATAAAACTACATCGTCAGGACAAAGCGATAGCTCTGTGATTTCTAGTGTAGTGTTCACCAAGGAAGATTTGAATAGTGAAAGTGCCATAACTTATGAGGGTTCCTCAGAGAAGGAAATATTGAACGAGTCAGTACAGCAACTTAGTACGGTGGACTTCTCCACTGCGACTGGATCTAATGTGTTGAGAACCATTAACAGTACAGATACAAATATGCCCATTCTTCCTGAACCGACAGCCCGGGTGAAGGAGTACCCTGAGGCGTCATTGAAGGGAAGCGTGGCACCATTTAATCACATGCTCAATAGCTATTACATGGATCCAAGTGATCCATTCTATGAAATATGCCAGAGAGTGATCCGGGACATGACTCAATATGGTGTTTGTGTTTTGAACAATTTCCTGGGAAAAGACCAAGGACTATTAGTATTAAATGAAGTGTTAAAAATGTACAGATCAGGAATATTCACAGCTGGACAACTGGTGTCTAGCCCTGGGAGTACAGAAGCGCAAACGATTCGAAGCGATCGCATCACGTGGATAGATGGAAAAGAACCTCAATGTTTCCATATCAGGCAACTAATCAGCAAGGTTGACAATATAATTCTGAGGGCGAACAAAATGGCCAACAATGGAAAAATGGGAGACTTCGTCATCAACGGCAGAACAAAAGCCATGGTAGCGTGCTACCCAGGACTTGGCAGCCATTACGTGAAGCACGTAGACAACCCCAACAAAGATGGCAGGTGCATCACCGCCATATATTATCTAAACCTGGACTGGGACGTGAAACGATACGGTGGACTACTCAGGGTGTTCCCGGAAGGTACCAATCAAGTGGCCGATATAGCACCGATATTCGACCGGATGCTTTTCTTCTGGTCGGATCGCCGAAACCCACACGAAGTCCAACCCGCCTACAGCACCAGATACGCAATAACACTGTGGTACTTCGATGCTCACGAACGAGAAGAAGCCCTTAGGAAATACAAAGAACGCGGCCAGCCGTCTTCAAGTAAGTGA
Protein
MGCDYGFELGAGRCPTCKCRDPCSGVTCPAGRACATVDVACDADYCPPVPACLPKKSGQCPYLVPQSGACEWSCRSDAECSGGERCCATGCGTACTQPVHQTACQQRRALALHTAAESGNPPAWAWVPQCTEDGAYQEVQCRRSDKTCWCVDTAGNEIPGTRTSNSTPTCASPIECPETNCNDITACAHGQELDRRGCPTCECRDPCAEAKCKPDESCELVPLDCEGAVCPPLARCAPSLRCPDSTTPLGAPDGSGSLICGPNAAACPSTHACRFAPHDSGPNVCCPKPRTVCFESKDEGNCTEGQVLNTTRWHFNHERNRCERFRYHGCSGNHNNFRTKDECNAVCPVLSPCERLREKNEAAALKYGKGTFIPVCDASGAWEPVQCMSHIDVCWCVSARGEPLKGSLVRGSKPSCNFRQARKWIQKDPFDEKAKADEVLEELIRQMTAYRVDEFEEDDADLDEDLAEARSTADFVDKEAQNEEAILVSEFVEPKQALTTRKMDRPLVLEEKISFKTKCQMLQAEIDNGSEGYRPRCLSDGSFSPRQCVRGRCWCVDAAGERRHHAGPVPDLPAPDPCERTQIESAKLELKLIGVDDSVAQRSSGVLAVKLAALGARVPVSVTKDRGATRLRVSLYGPKSVDRVYYIENLVQQEKLSNSDSEDSLRADVVSAEYTLSLPTPALQQREILSESTVSAATSYHTALIVLAATSAFIISILCVLVMLYRARLQREPHKAERFLPPAPPVYVLSADEKAELARVLHAPPPPIPPQSDDSKEGGLACCAVCNQKTQRRCARCLNIYYCNTEHQRQDWKRHKSECIPKLTKQLAKSDNFGECSTVTKEAAKEIGNIAQNYQHDVTKVCNDGDVRHLKKSKTKNEKKSVSEGSSVSKQNKFDFKKNIQQTQNNKTTSSGQSDSSVISSVVFTKEDLNSESAITYEGSSEKEILNESVQQLSTVDFSTATGSNVLRTINSTDTNMPILPEPTARVKEYPEASLKGSVAPFNHMLNSYYMDPSDPFYEICQRVIRDMTQYGVCVLNNFLGKDQGLLVLNEVLKMYRSGIFTAGQLVSSPGSTEAQTIRSDRITWIDGKEPQCFHIRQLISKVDNIILRANKMANNGKMGDFVINGRTKAMVACYPGLGSHYVKHVDNPNKDGRCITAIYYLNLDWDVKRYGGLLRVFPEGTNQVADIAPIFDRMLFFWSDRRNPHEVQPAYSTRYAITLWYFDAHEREEALRKYKERGQPSSSK

Summary

Uniprot
NA  
ProteinModelPortal
NA  
PDB
5LBC     E-value=1.75583e-72,     Score=698

Ontologies

KEGG
101741191    no KO assigned | (RefSeq) balbiani ring protein 3
GO
GO:0004867   GO:0005576   GO:0030414   GO:0016491   GO:0005506   GO:0016705   GO:0031418   GO:0004222   GO:0031012   GO:0008233   GO:0055114  

Topology

Length:
1245
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.56469
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02010
outside
1  -  702
TMhelix
703  -  725
inside
726  -  1245
 
 

Population Genetic Test Statistics

Pi
213.439738
Theta
165.149616
Tajima's D
0.6309
CLR
0.367795
CSRT
0.550222488875556
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
29197581 DPCSGVTCPAGR 100.00 4e-05
29197581 SICAGICEYGYR 100.00 5e-05
29197581 FAPHDSGPNVCCPKPR 100.00 0.001
29197581 CPDSTTPIGAPDGSGSIICGPNAAACPSTHACR 100.00 0.004
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