Silkworm Genome Informatics Database

Gene

KWMTBOMO15331 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005069

Annotation

NA

Location

Bomo_Chr25(+):9325106-9327550 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.5 Nuclear Reliability : 1.243

CDS

ATGAAGGTGGCAGCGGCTCTTTTTACCATTTTGCAAATTGTTAATGCGGTTCCCACGATAGCAGAGCACGATACTGCTCCCGCTAGCGACGCGCAGACTGGGGACGATCTTCATCAAGAAATTGCAGAAGCTGTTCTTGGTGCTTCTCAAGAACATGATAGCGCTAAACAAACCGACACAAATGTAAAAACCGTAAAGTTAGGTGGACCAATTTTGGATGATCTAATTTATCAGGTTTCTGCAGCAACGGGAAACCAAGAGAATAAAGTTTCAAAACACCTCGATTCGTTTCATGATACATTAGAAAAGGTGACTGATTTATCATCTGTGGGGAATATAATTAAACAGTTTGGAAATACTGTTAAAGTAGATATTTCTAAATCGAAAGGAATACTTTTAGACAAAGCGAAAGCTATCGAAAAAGGTGTCTCAGTAGCCAAAGATCTTCTACGAGATAAAACCGAAGAAGTCGTTAAAGGCATTTCTGAGGCAAAATATGTTTTAAGTAAGAAAGGTGAAGAAACCTTAAAACATATTATTAATTTAGGGACTGGTATTAAGGGAAAAATTCAAGATATTCTAAAAAATATTGCTACATCACATGAGGTTGCAAAAGAAAAATTCAAAGTTATAGTGAAAAACTTTACCGATGCTCTATGCAATATTAAATTACCACAAATAGATTTTTCTACAACATTAGCATTAGCAGCTGAAGCAGTCACAGTGGGTATTTCATTTATTGCTTTTCTGGGATCAGTGATAGAGAAAGAAATTCTGTCAAAGATACCCAATGATGGCTCGTTAAAAAATCATCTTGAATCTGTTCTTGATTCTATTTCAAAAGGTACCTTAAAGTTTGGTGGCAGCGATGATAATAATTCCGAAAAATCAGAAACATCACAAGTCGATGTACAGAGCATTGATGTAGGAAAATCTAAAACAGTAAATAATGATGAAGAAAAAGCTAGTCCTGGCGACGACTTCGAAGATAATGACGATGATGACACATCTGAAAGTTATGAAGATGGTTCTGAAGAAGTGAAAACCATTACAGTTGAATCATCAAAATCGGCTCCTGTTCAAACAAATCAGGCAAACACTGAACAAAAAAGTTATGAAGCAATACATCCTTTGCAACAACGAAACAGTGTAAAAGTATTTCAGACCGGATCGGAACATCCTCATGTGAATGTTAACCGAGAGGCCAAACATTACAGAAATTATAAAAACATTGGTTCGCAGTTCCTATCCAATGAGCCTTTTGCTTATGCTCATAGTGGAAGCAACGTAAAAGCTGGAGGATATGGTGGTAGTGGATTTGTAGGGCACGGTCCTTTAACTCCTGTTCAATTGAATTCGGGTGATAATTCAGGAATAATACATACCAAGCCAGAAACAGGTGTTCATGCGTTTGCTTATGCATAA

Protein

MKVAAALFTILQIVNAVPTIAEHDTAPASDAQTGDDLHQEIAEAVLGASQEHDSAKQTDTNVKTVKLGGPILDDLIYQVSAATGNQENKVSKHLDSFHDTLEKVTDLSSVGNIIKQFGNTVKVDISKSKGILLDKAKAIEKGVSVAKDLLRDKTEEVVKGISEAKYVLSKKGEETLKHIINLGTGIKGKIQDILKNIATSHEVAKEKFKVIVKNFTDALCNIKLPQIDFSTTLALAAEAVTVGISFIAFLGSVIEKEILSKIPNDGSLKNHLESVLDSISKGTLKFGGSDDNNSEKSETSQVDVQSIDVGKSKTVNNDEEKASPGDDFEDNDDDDTSESYEDGSEEVKTITVESSKSAPVQTNQANTEQKSYEAIHPLQQRNSVKVFQTGSEHPHVNVNREAKHYRNYKNIGSQFLSNEPFAYAHSGSNVKAGGYGGSGFVGHGPLTPVQLNSGDNSGIIHTKPETGVHAFAYA

Uniprot

H9J6C7

Pubmed

19121390

EMBL

BABH01019808

Proteomes

UP000005204

PRIDE

H9J6C7

ProteinModelPortal

H9J6C7

KEGG

101741789 no KO assigned | (RefSeq) uncharacterized LOC101741789

GO

SignalP

Position: 1 - 16, Likelihood: 0.982126

Length:

474

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.77438

Exp number, first 60 AAs:

0.02807

Total prob of N-in:

0.05532

outside

1 - 474

Pi

226.649734

Theta

203.948428

Tajima's D

0.366985

CLR

0.005517

CSRT

0.469126543672816

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
27102218	NHIESVIDSISK	96.00	1e-10
25860555	NKAEYIECDITTDIDTVSK	100.00	1e-10
27102218	TITVESSK	100.00	1e-10
25860555	DGIPQMSHK	95.45	9e-09
24093152	NIGGVAIVDISIDDFR	95.45	9e-09
27102218	VTDISSVGNIIK	95.45	9e-09
25860555	EPVPDPIIINHYR	100.00	5e-04
24093152	VFQSTQYVR	100.00	5e-04
27102218	SYEAIHPIQQR	100.00	5e-04
25860555	IISVVDIGIPDNR	100.00	0.009
24093152	SESSSSSSSSSSSSR	100.00	0.009
27102218	IGGPIIDDIIYQVSAATGNQENKVSK	100.00	0.009
25860555	GTMVANINGEVIEK	100.00	0.012
24093152	SAPVITIDEAKK	100.00	0.012
27102218	HIDSFHDTIEK	100.00	0.012

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics