Gene

KWMTBOMO15329

Pre Gene Modal

BGIBMGA005135

Annotation

PREDICTED:_zinc_finger_C2HC_domain-containing_protein_1C_[Amyelois_transitella]

Location

Bomo_Chr25(-):9260077-9297025      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.755

CDS

ATGGAAAAGGGCGGAGGCTCCAGACTGCTTCAAATGCAGGCCAGATTTCAACAGAAACAACTACAAGAAAGAGAATTGAAAATAGCATCGCTTTACGAAGCACAACAGGCGCGTGCCTTGGACCGGGTGAGGCAATCTCCCAGCAATGGCGTTAGTACAGCCTCATCGCAGCAGCCGACGCCTGTACCTCATCAGCCAGGAAAGGTTCGTCAAATGTTCGAAGAGAGACGCACAAAAGCAGGCATTGACAAGAGCTACCCGCTACAGCCGATACACAACACCGAAAGAACGAACCGGAAGACATTACCGAACGGATACGCGAAGGTTTCGAATTCCACCACCAGCACGAGGGTCATAGTCGAGAAGCGATCGCAGAAGACACATACAACAGTCAGCTCTCATAGCGTTAAGAAACAGCAAAAAATAGACAATTTGGTGAACGGCTCCGGTGATCTCAACCACAATCACGAAGATGACATTAGCGCTGTTAAACATTCGCTTCCACAAAGCAACGGCGAAATCGGTACAGACAAAGATGAACCGGACAAGGTGGAAAACAATAATGATTTACTAGAAAATGAAACGTTTCCGGAAATGTTGGCGCCCATACCCACGCCCCGGACACCGGAACCGATTCCCGAAACAAAGAAGACTACTGTTACTAAGACTGCACCAGCCAAAACGAGCCCTGTAAAATCGAAACCACAGACACCCGTAACGGCTTCACCTCGTAGAATTACCAGTGATAGAAGCGTATCGGAGACGAATAAGACACGGGGTGCTATGCAACGACCAGCCAACACAAAGGCGAACAGTGCGGGTTCTGGTACTCCTAAGGGTCGATCCACGACGGCGACAGCTCCGACCAGCGCGGCCGCGTCGGGTGACGCGTGCGGCGTCTGCGGTCGACACTTCGCCTCCGATCGCATCGCTAAACACCAGGAGATCTGCAAAAAGGCCCACAGCAAGAAGAGGAAACCCTTTGATGTACTCAAACATCGTTTGGCTGGAACGGAAGCAGAACCCTTTATCAATAAATTGCGCAAAACCACCGCTACTCCGTCAACTACTAAAGTGAACAAAGGCAAGCAATTGAACAGCAACTGGCGACAAAAACACGAAGAGTTCATCCAGGCAATACGAGCGGCGAAACAAGTGCAGGCACATTTGAATGCTGGAGGTAAGCTGAGCGATCTGCCGCCCCCTCCGCCGTCGGAGAATCCGGACTACGTGCAGTGTCCTCATTGCAATCGCAGGTTCAACCAGGGCGCTGCCGAGCGACACATTCCGAAGTGCGCAAACTTTCAGTTCAACAAACCGAAGCCGGCCGCTAAACGACGATAA

Protein

MEKGGGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVNGSGDLNHNHEDDISAVKHSLPQSNGEIGTDKDEPDKVENNNDLLENETFPEMLAPIPTPRTPEPIPETKKTTVTKTAPAKTSPVKSKPQTPVTASPRRITSDRSVSETNKTRGAMQRPANTKANSAGSGTPKGRSTTATAPTSAAASGDACGVCGRHFASDRIAKHQEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATPSTTKVNKGKQLNSNWRQKHEEFIQAIRAAKQVQAHLNAGGKLSDLPPPPPSENPDYVQCPHCNRRFNQGAAERHIPKCANFQFNKPKPAAKRR

Uniprot

H9J6J3   A0A2A4K924   A0A3S2P8V7   A0A1E1WUA5   A0A1E1W9K0   A0A2W1BLK7   + More
A0A1E1WTY8   A0A2H1WHV2   A0A1E1WT48   A0A2Z5U762   A0A0N1ICB9   A0A212EJ97   A0A194Q956   A0A034VIH0   A0A034VK42   A0A0K8VJP2   A0A0K8VWN4   A0A0L7LU24  

Pubmed

19121390    28756777    26354079    22118469    25348373    26227816    + More

EMBL

BABH01019810    NWSH01000029    PCG80559.1    RSAL01000001    RVE55246.1    GDQN01000431    + More
JAT90623.1    GDQN01007401    JAT83653.1    KZ150042    PZC74545.1    GDQN01000584    JAT90470.1    ODYU01008436    SOQ52044.1    GDQN01000835    JAT90219.1    AP017494    BBB06768.1    KQ460973    KPJ10070.1    AGBW02014497    OWR41572.1    KQ459324    KPJ01505.1    GAKP01017027    GAKP01017025    JAC41927.1    GAKP01017029    JAC41923.1    GDHF01013205    JAI39109.1    GDHF01009334    GDHF01006745    GDHF01003737    JAI42980.1    JAI45569.1    JAI48577.1    JTDY01000098    KOB78879.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000007151    UP000053268    + More
UP000037510   

PRIDE

H9J6J3   

Interpro

IPR026319   ZC2HC1       

ProteinModelPortal

H9J6J3   A0A2A4K924   A0A3S2P8V7   A0A1E1WUA5   A0A1E1W9K0   A0A2W1BLK7   + More
A0A1E1WTY8   A0A2H1WHV2   A0A1E1WT48   A0A2Z5U762   A0A0N1ICB9   A0A212EJ97   A0A194Q956   A0A034VIH0   A0A034VK42   A0A0K8VJP2   A0A0K8VWN4   A0A0L7LU24  

KEGG

101741937    no KO assigned | (RefSeq) zinc finger C2HC domain-containing protein 1C

GO

PANTHER

PTHR13555  

Length:

447

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00023

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00246

outside

1  -  447

 

 

Pi

227.952192

Theta

171.171455

Tajima's D

1.323764

CLR

0.112573

CSRT

0.747162641867907

Interpretation

Uncertain