Gene

KWMTBOMO15316

Annotation

PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]

Location

Bomo_Chr25(+):8935037-8938288      View in EpiBrowser

Full name

Sodium channel protein Nach      

Alternative Name

Pickpocket protein 4

Location in the cell

PlasmaMembrane   Reliability : 2.053

CDS

ATGCGATCAGCCGCTTGCAACTGTCCAAGAGATTGTGAGTCACGCCAGTACAAAGTTGACATTAGCACTGGGAATTTGAACGCTCTGCCGTACATTCCTAACAATCCCTTTGCAGATGTAACCTTCAAGCGTAGTACATCAATCATGCGTTTCATTTTTCCAAACTCCGTATACGTGAAACAGAAGCAAGAAACCGTCGTGCCTTTGATCAGCCTCGTCTCTAATCTCGGAGGCGTTTTCGGTCTATGTTTGGGTTGTAGCTGCATCAGCGTGCTCGAAATATTATTCTTTTCATATCTGTATATTAAGAGAAAAATTCGTAAGCACTTTATTAACCCACGTAAGTGA

Protein

MRSAACNCPRDCESRQYKVDISTGNLNALPYIPNNPFADVTFKRSTSIMRFIFPNSVYVKQKQETVVPLISLVSNLGGVFGLCLGCSCISVLEILFFSYLYIKRKIRKHFINPRK

Description

Part of a complex that plays a role in tracheal liquid clearance. Probable role in sodium transport (By similarity).
Part of a complex that plays a role in tracheal liquid clearance. Probable role in sodium transport.

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Keywords

Glycoprotein   Ion channel   Ion transport   Membrane   Sodium   Sodium channel   Sodium transport   Transmembrane   Transmembrane helix   Transport   Alternative splicing   Complete proteome   Reference proteome  

Feature

chain  Sodium channel protein Nach
splice variant  In isoform A.

Uniprot

A0A194RKY6   A0A194PHA1   A0A232FJV4   K7J1Q6   A0A067QUS0   A0A182RBD3   + More
Q7PRJ3   Q28WP2   B4H760   A0A182UQ91   A0A182K6C4   A0A182W3S6   A0A182LY59   A0A182YS00   A0A182NDK8   A0A1I8P290   A0A0L7RDT9   A0A182GCJ0   A0A1B0AWZ8   A0A182PVF2   A0A182QFT1   A0A1J1J2M5   A0A084WQY4   E2A4M1   A0A336M002   A0A195B3V5   A0A3L8DSJ1   W5JM38   A0A3B0IYE0   A0A182GCJ1   A0A336MTW7   A0A139WFX5   A0A0K8VFG4   A0A0P8XQJ1   A0A182GXU6   A0A0P9AG67   B3MDJ9   B4MIU3   A0A1W4UXC8   A0A1I8PG23   A0A1W4XB49   Q17MX5   A0A1I8PAZ4   B4LP99   Q9NJP2   O61370   B4QIE2   A0A336KF41   A0A1I8Q569   A0A182GRG8   B4P5X5   A0A182FM32   A0A1I8N7J9   A0A158Q786   A0A238BZ76   A0A0J7KTG4   A0A183HZK6   A0A182NA42   T1H366   A0A1I8M339   A0A0N4W7B7   B4HT74   A0A1S4EX71   A0A1S4FSE9   A0A182FLG5   Q16RC1   K7IP12   A0A1I8PEH0   A0A1I8Q523   A0A232FIR5   A0A1S4EW59   E2BM03   A0A182KL79   A0A1I8P9G1   A0A1I8P9B5   B4JWN2   B3NPF9   B0WDC2   W2T696   A0A1A9Z9F9   A0A384TM68   O61365   O61365-3   A0A384SX96   A0A0L0BVZ9   A0A194PW83   A0A1W5C9C1   O61365-2   B4NYM0   A0A182E6X6   J9F3I1  

Pubmed

26354079    28648823    20075255    24845553    12364791    15632085    + More
17994087    25244985    26483478    24438588    20798317    30249741    20920257    23761445    18362917    19820115    17510324    22936249    17550304    25315136    20966253    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12571352    26108605    22919073   

EMBL

KQ460045    KPJ18079.1    KQ459604    KPI92428.1    NNAY01000116    OXU30820.1    + More
KK853243    KDR09460.1    AAAB01008849    EAA07138.5    CM000071    EAL26625.3    CH479216    EDW33593.1    AXCM01000168    KQ414612    KOC69152.1    JXUM01054263    KQ561813    KXJ77446.1    JXJN01004965    AXCN02001756    CVRI01000066    CRL06218.1    ATLV01025839    KE525401    KFB52628.1    GL436710    EFN71623.1    UFQT01000343    SSX23390.1    KQ976625    KYM78952.1    QOIP01000005    RLU22829.1    ADMH02000731    ETN65216.1    OUUW01000001    SPP72777.1    KXJ77447.1    UFQT01001968    SSX32233.1    KQ971351    KYB26842.1    GDHF01014716    JAI37598.1    CH902619    KPU76840.1    JXUM01096280    JXUM01096281    JXUM01096282    KQ564253    KXJ72525.1    KPU76839.1    EDV37462.1    CH963719    EDW72032.1    CH477203    EAT48027.1    CH940648    EDW60208.1    AF136603    AAF61426.1    AF024691    CM000362    CM002911    EDX07389.1    KMY94317.1    UFQS01000390    UFQT01000390    SSX03496.1    SSX23861.1    JXUM01082415    KQ563311    KXJ74083.1    CM000158    EDW91891.1    KZ269987    OZC10394.1    LBMM01003440    KMQ93534.1    UZAJ01039976    VDP12491.1    CAQQ02171020    UZAF01016422    VDO27681.1    CH480816    EDW48175.1    CH477717    EAT36963.1    NNAY01000169    OXU30358.1    GL449100    EFN83252.1    CH916375    EDV98370.1    CH954179    EDV55726.1    DS231896    EDS44435.1    KI660223    ETN76502.1    AE013599    API64972.1    AF022713    AY226538    AAO47364.1    API64973.1    JRES01001352    KNC23384.1    KQ459591    KPI97019.1    AAAB01008823    EAU77465.2    CM000157    EDW88684.1    UYRW01000759    VDK70442.1    ADBV01003284    EJW81894.1   

Proteomes

UP000053240    UP000053268    UP000215335    UP000002358    UP000027135    UP000075900    + More
UP000007062    UP000001819    UP000008744    UP000075903    UP000075881    UP000075920    UP000075883    UP000076408    UP000075884    UP000095300    UP000053825    UP000069940    UP000249989    UP000092460    UP000075885    UP000075886    UP000183832    UP000030765    UP000000311    UP000078540    UP000279307    UP000000673    UP000268350    UP000007266    UP000007801    UP000007798    UP000192221    UP000192223    UP000008820    UP000008792    UP000000304    UP000002282    UP000069272    UP000095301    UP000050640    UP000036403    UP000050787    UP000015102    UP000038042    UP000268014    UP000001292    UP000008237    UP000075882    UP000001070    UP000008711    UP000002320    UP000092445    UP000000803    UP000037069    UP000077448    UP000271087    UP000004810   

PRIDE

Q9NJP2    O61370    O61365   

Pfam

PF00858   ASC        + More
PF07679   I-set

Interpro

IPR001873   ENaC        + More
IPR020903   ENaC_CS       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013098   Ig_I-set       
IPR037448   Zig-8       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A194RKY6   A0A194PHA1   A0A232FJV4   K7J1Q6   A0A067QUS0   A0A182RBD3   + More
Q7PRJ3   Q28WP2   B4H760   A0A182UQ91   A0A182K6C4   A0A182W3S6   A0A182LY59   A0A182YS00   A0A182NDK8   A0A1I8P290   A0A0L7RDT9   A0A182GCJ0   A0A1B0AWZ8   A0A182PVF2   A0A182QFT1   A0A1J1J2M5   A0A084WQY4   E2A4M1   A0A336M002   A0A195B3V5   A0A3L8DSJ1   W5JM38   A0A3B0IYE0   A0A182GCJ1   A0A336MTW7   A0A139WFX5   A0A0K8VFG4   A0A0P8XQJ1   A0A182GXU6   A0A0P9AG67   B3MDJ9   B4MIU3   A0A1W4UXC8   A0A1I8PG23   A0A1W4XB49   Q17MX5   A0A1I8PAZ4   B4LP99   Q9NJP2   O61370   B4QIE2   A0A336KF41   A0A1I8Q569   A0A182GRG8   B4P5X5   A0A182FM32   A0A1I8N7J9   A0A158Q786   A0A238BZ76   A0A0J7KTG4   A0A183HZK6   A0A182NA42   T1H366   A0A1I8M339   A0A0N4W7B7   B4HT74   A0A1S4EX71   A0A1S4FSE9   A0A182FLG5   Q16RC1   K7IP12   A0A1I8PEH0   A0A1I8Q523   A0A232FIR5   A0A1S4EW59   E2BM03   A0A182KL79   A0A1I8P9G1   A0A1I8P9B5   B4JWN2   B3NPF9   B0WDC2   W2T696   A0A1A9Z9F9   A0A384TM68   O61365   O61365-3   A0A384SX96   A0A0L0BVZ9   A0A194PW83   A0A1W5C9C1   O61365-2   B4NYM0   A0A182E6X6   J9F3I1  

PDB

4NYK     E-value=0.058138,     Score=78

KEGG

105841467    no KO assigned | (RefSeq) sodium channel protein Nach-like

GO

GO:0016021   GO:0005272   GO:0050808   GO:0032589   GO:0035002   GO:0006814   GO:0060025   GO:0016020   GO:0005524   GO:0006813   GO:0006270   GO:0042555   GO:0015930  

PANTHER

PTHR11690   PTHR23279  

Subcellular location

Membrane  

Length:

115

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.93546

Exp number, first 60 AAs:

0.33704

Total prob of N-in:

0.11100

outside

1  -  77

TMhelix

78  -  100

inside

101  -  115

 

 

Pi

209.815617

Theta

20.968953

Tajima's D

0.297405

CLR

56.671003

CSRT

0.459077046147693

Interpretation

Uncertain