Silkworm Genome Informatics Database

Gene

KWMTBOMO15315

Pre Gene Modal

BGIBMGA005059

Annotation

PREDICTED:_synaptotagmin-16_[Bombyx_mori]

Location

Bomo_Chr25(+):8904797-8916844 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.61

CDS

ATGGTGGCTAACATTGGCGTCATCAACCCAACAAATGTTGAGGCGACGGCGTATATAAGTGCGGTGGCAGCGTTCGCGGCTGTGGTGCTCGTGCTACTGCTATTCCTGGGCAGGAGGTGGTGTCATTCGACCGTATTCAATCGCAAGTGCTGCGACGACATCCTCGCTGTAAATCCACGAAACCCGACCCCTTGCCTTCCAATAGAAAATGCGCAGATCGATGCTTTGTCGAAACCGAACAATTTTCCCGACCGTGTATTTGCGTTCGAGACCTCCGACTCGGATGACGACCTGCGCTTGCGCATACAACAGGATAAAGAAGAATGTCACTACGAAGAGAAGAACGAGAATGCTTCAGCTCCTGTGAAGCTCGAAGTGGAGCTGGTGGAGACTGCGCTAAGGGAAACAACGCTAAGGGAGACGAAGATCGACGATGTCGTGCCGCAGAGAACGGAGTACCTTCACACACTCGAAGCACAGAGCAGCGTCGATAGTGATGTCATAGCACATAATGATACTTCCCTACTTTGTGGTGAAAGCTCTCAAGAGCGTGGGTCAATCGAGCTGACACTGTTGTACGACGCGCCAGTTCGTTGCATGACGGTACACGTGCTGCAAGGCCGCTCCCTTCCTCTAAAAACCACCGGACAGATATTGCAGAGTCAGGTTCGAGTTGTTCTGCTGCCGTTGAAGAAACAGAAGTTCAAATCAAAGATCCGAAATGGAGAGAATCCTCAATACATGGAGAGCTTCGTTTTGCATAAAATGAATCCTGAGGATGTACACGGTCTTGGCCTGAGAATCCGTGTGTATGGATGCGAACGCATGCGTCGGCAGCGACTGCTGGGCGAGGCAGCTGTCTCGTTCGCATCTCTTAATCTCGAGCTAGAAAACAATCTGTGGCTTCAGCTCGCACCGAGACAACACCATCAAACTAGCTTACAGCTACCAAAACTCGAGTTGACCAGTACAATAACAGGGGTGCTGGCCAGTCCCTCGTCTATAGCGACGGTGACTACTCCATCAGCAGGAGCCGCGGGCGGTGAAGCCTGCAGCCTCGCTCGGTCGGACTCCGCCTCATCCTGCTGCAGTGCCAGATCAGCACCAGAACTATTACTTGGTCTACAGTACAACTCTACGACGGGCCATTTGTCTGTTGAGATAATTAAAGGGACACATTTCCGAAAGCTGTCTCCGAACAAGGCCCCCGATACATACGTGAAGCTCTGCCTCATCAGCTCTCTCGGTATGGAGATGGGACGCTGTAAGTCTACCACGCGACGGGCACAATCCAATCCGCTGTATAAGGAGCTGTTTATATTTCAGGTGGCTCTTTTCCAACTAAGCGAGGTGACGTTGATGGTGTCCGTCTGGTGGCGTCGCAGTGTCAAACGAAACGAGATGGTCGGCTGGTTCTCTTTAGGACACAGTTCTTCGGGACGTGAAGAAGAACGACACTGGAGGGAGTTGTGTGACCGACAAGGGGAGCAGGTACAACGGTGGCACGTTCTGTTGGATTCCTGA

Protein

MVANIGVINPTNVEATAYISAVAAFAAVVLVLLLFLGRRWCHSTVFNRKCCDDILAVNPRNPTPCLPIENAQIDALSKPNNFPDRVFAFETSDSDDDLRLRIQQDKEECHYEEKNENASAPVKLEVELVETALRETTLRETKIDDVVPQRTEYLHTLEAQSSVDSDVIAHNDTSLLCGESSQERGSIELTLLYDAPVRCMTVHVLQGRSLPLKTTGQILQSQVRVVLLPLKKQKFKSKIRNGENPQYMESFVLHKMNPEDVHGLGLRIRVYGCERMRRQRLLGEAAVSFASLNLELENNLWLQLAPRQHHQTSLQLPKLELTSTITGVLASPSSIATVTTPSAGAAGGEACSLARSDSASSCCSARSAPELLLGLQYNSTTGHLSVEIIKGTHFRKLSPNKAPDTYVKLCLISSLGMEMGRCKSTTRRAQSNPLYKELFIFQVALFQLSEVTLMVSVWWRRSVKRNEMVGWFSLGHSSSGREEERHWRELCDRQGEQVQRWHVLLDS

Uniprot

A0A2W1BL82 A0A2A4JV39 H9J6B7 A0A194PGJ7 A0A194RL85 A0A212F902 + More
D6WSS6 A0A182MZP1 A0A1D2NN05 A0A2P6KHH9 A0A087TT47 E2ASS2 A0A026WIB8 E2BJ73 F4X5S3

Pubmed

28756777 19121390 26354079 22118469 18362917 19820115 + More
27289101 20798317 24508170 30249741 21719571

EMBL

KZ150095 PZC73616.1 NWSH01000562 PCG75636.1 BABH01019830 KQ459604 + More
KPI92427.1 KQ460045 KPJ18080.1 AGBW02009658 OWR50207.1 KQ971352 EFA06360.2 LJIJ01000001 ODN06631.1 MWRG01011786 PRD25782.1 KK116623 KFM68286.1 GL442359 EFN63497.1 KK107238 QOIP01000007 EZA54849.1 RLU20275.1 GL448558 EFN84223.1 GL888742 EGI58163.1

Proteomes

UP000218220 UP000005204 UP000053268 UP000053240 UP000007151 UP000007266 + More
UP000075884 UP000094527 UP000054359 UP000000311 UP000053097 UP000279307 UP000008237 UP000007755

PRIDE

H9J6B7

Pfam

PF00168 C2

Interpro

IPR035892 C2_domain_sf + More
IPR000008 C2_dom

Gene 3D

2.60.40.150

ProteinModelPortal

A0A2W1BL82 A0A2A4JV39 H9J6B7 A0A194PGJ7 A0A194RL85 A0A212F902 + More
D6WSS6 A0A182MZP1 A0A1D2NN05 A0A2P6KHH9 A0A087TT47 E2ASS2 A0A026WIB8 E2BJ73 F4X5S3

PDB

6ANK E-value=3.43505e-16, Score=209

KEGG

101741896 K19328 synaptotagmin-14/16 | (RefSeq) synaptotagmin-16

GO

GO:0016021 GO:0006887 GO:0005515 GO:0046872 GO:0005391 GO:0005524 GO:0006813 GO:0006814 GO:0006270 GO:0042555 GO:0015930

Length:

507

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

36.75153

Exp number, first 60 AAs:

22.64671

Total prob of N-in:

0.20713

POSSIBLE N-term signal

sequence

outside

1 - 14

TMhelix

15 - 37

inside

38 - 507

Pi

259.52872

Theta

188.369377

Tajima's D

0.934468

CLR

0.219496

CSRT

0.63886805659717

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics