SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15312  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005142
Annotation
PREDICTED:_alpha-mannosidase_2_[Papilio_xuthus]
Full name
Alpha-mannosidase      
Location in the cell
Extracellular   Reliability : 1.005 Nuclear   Reliability : 1.054
 

Sequence

CDS
ATGAACGGGCTCGTCAAAACCATTGTGTCGAGGGACGGAGTGGCCACACCCGTGCACATGGACTTCGTGCAGTACGACACGCAGAAGGGGCGGGACAACAACAGCGGAGCCTACCTGTTCATACCGAGCGGGCCCGCCAAGGACTTCAAGTCGGATCCGTACCCCGAGATCGTGGTCACCGAAGGCATACACAAGTCCACGCTCTACGCCGCCCTCGTCGGACCCAAAACCGCAGAAATTATACTCTCTGTGACGGTGTACAACAACCCGTCGCTTCCGCACGCCGAGCTGGAGGTCAGCAGCGCGCTGCTCATCGACCCGCAGGTGGACGACCTGGAGCTGGCGCTGCGGCTATCCACTAGCGTCCGGAACGGAGACGTCTTCTACACAGACTTAAATGGGATGCAGATGATAAAACGTCGTTACTTCGAGAAGATTCCGCTGCAGGCGAACTTTTATCCGCTGCCCGCCGCCGCCTACATCGAGGACGAGAACATCAGGTTCACGGTGCTCACTTCCACTCCGTTAGGAATGGCTGCCTTACAGCCGGGACAAATTGAGGTGATGCAAGACAGGCGCCTGAGCAGAGACGACAACCGAGGCATGAACCAAGGCGTGTTGGACAACGTGAGGACGCGCCACACATTCAGGCTCATAGCGGAGCCGGCCCTCGGGCACTGCGCCAAGCCGCCGTCTGATCACCCAAGCGGGTGGCTGACGCTGGGTAGTCACGTGTCGCAGCAGATGCTCCTGCAGCCGCCGCTCGTGCTGCACTACACGCCGCGCGGAGACGAGCCCCGCCCCAACTACCAGAGGGCCTCCGTCAACGCCGCCGACATCGTGCTGGCCTCCTACAGAACCCACACCACCACTAAGAAGGAAGGCACGAATTTACACGGGATGGGGCTGACGTTCCAAAGGGTAGCCCTCGACACGTGCTACGGTCACAAGGACACCGTCGAAGCGTATCCGCTAAGTGACGGACAGTTCCGTCTGTCAGATTTGATAGACGTGAAATCAGATCGTGTTTACGAAAGCACGTTGACTTTCAATCAGATAGACAAGCAAGTGTTAGACGGAATCATCACGCTGTGCCCCATGGAGATCCGATCCGTGTTCGTCAATCAAACTATAAGGAACGGATGA
Protein
MNGLVKTIVSRDGVATPVHMDFVQYDTQKGRDNNSGAYLFIPSGPAKDFKSDPYPEIVVTEGIHKSTLYAALVGPKTAEIILSVTVYNNPSLPHAELEVSSALLIDPQVDDLELALRLSTSVRNGDVFYTDLNGMQMIKRRYFEKIPLQANFYPLPAAAYIEDENIRFTVLTSTPLGMAALQPGQIEVMQDRRLSRDDNRGMNQGVLDNVRTRHTFRLIAEPALGHCAKPPSDHPSGWLTLGSHVSQQMLLQPPLVLHYTPRGDEPRPNYQRASVNAADIVLASYRTHTTTKKEGTNLHGMGLTFQRVALDTCYGHKDTVEAYPLSDGQFRLSDLIDVKSDRVYESTLTFNQIDKQVLDGIITLCPMEIRSVFVNQTIRNG

Summary

Cofactor
Zn(2+)
Similarity
Belongs to the glycosyl hydrolase 38 family.
EC Number
3.2.1.-
EMBL
BABH01019831    ODYU01000395    SOQ35107.1    KZ150095    PZC73618.1    KQ459604    + More
KPI92422.1    NWSH01000562    PCG75640.1    KQ460045    KPJ18082.1    AGBW02009658    OWR50206.1    JTDY01000470    KOB77029.1    ODYU01006317    SOQ48060.1    KB632233    ERL90403.1    APGK01057855    APGK01057856    APGK01057857    KB741282    ENN70826.1    NEVH01015858    PNF26420.1    GALX01002173    JAB66293.1    KK852934    KDR13614.1    KK854722    PTY18168.1    NNAY01000155    OXU30485.1    GEZM01071358    JAV65870.1    KQ971352    EFA06316.1    KQ414667    KOC64685.1    GL453506    EFN75938.1    GECL01002524    JAP03600.1    GL765999    EFZ15726.1    KQ435863    KOX70418.1    CCAG010012590    KQ980322    KYN16606.1    GBBI01003636    JAC15076.1    GL887898    EGI69601.1    KQ983043    KYQ47914.1    KQ434905    KZC11228.1    KQ978023    KYM97981.1    ADTU01025073    ADTU01025074    ADTU01025075    KQ976400    KYM92668.1    GBYB01005913    GBYB01011354    GBYB01013488    GBYB01013723    JAG75680.1    JAG81121.1    JAG83255.1    JAG83490.1    KZ288194    PBC33888.1    LJIG01009178    KRT83600.1    KQ981948    KYN32614.1    JXJN01004205    KK107078    QOIP01000011    EZA60501.1    RLU16846.1    CH940650    KRF82740.1    KRF82741.1    GFTR01008561    JAW07865.1    GL440425    EFN65904.1    EDW66525.1    GDKW01003685    JAI52910.1    GEDC01026500    JAS10798.1    CH479186    EDW38944.1    GBHO01019052    JAG24552.1    CM000070    EAL26975.2    OUUW01000005    SPP81179.1    GDHC01004722    JAQ13907.1    CH916369    EDV93140.1    GAKP01014437    JAC44515.1    GAPW01000123    JAC13475.1    CH933806    EDW13969.1    ACPB03005842    DS232064    EDS33653.1    UYYG01000123    VDN53345.1    GDHF01019517    JAI32797.1    GEBQ01013209    JAT26768.1    CH954181    EDV49784.1    JXUM01095509    JXUM01095510    KQ564200    KXJ72595.1    GDHF01027895    JAI24419.1    GANO01000532    JAB59339.1    GECU01021213    JAS86493.1    GGMS01003497    MBY72700.1    GBXI01007913    JAD06379.1    JRES01000835    KNC27938.1    GFDL01009486    JAV25559.1    GFDF01001436    JAV12648.1    CH477824    EAT35901.1    GFDF01005259    JAV08825.1    ABLF02034554    GGMR01010298    MBY22917.1    GAMC01003919    JAC02637.1    GAMC01003920    JAC02636.1    DS235804    EEB17288.1    GGMR01018214    MBY30833.1    GECZ01017062    JAS52707.1   
Pfam
PF01074   Glyco_hydro_38N        + More
PF09261   Alpha-mann_mid
PF07748   Glyco_hydro_38C
PF18230   Glyc_hyd_38C_2
Interpro
IPR027291   Glyco_hydro_38_N_sf        + More
IPR037094   Glyco_hydro_38_cen_sf       
IPR011682   Glyco_hydro_38_C       
IPR013780   Glyco_hydro_b       
IPR028995   Glyco_hydro_57/38_cen_sf       
IPR000602   Glyco_hydro_38_N       
IPR011330   Glyco_hydro/deAcase_b/a-brl       
IPR011013   Gal_mutarotase_sf_dom       
IPR015341   Glyco_hydro_38_cen       
IPR041566   AManII_C       
SUPFAM
SSF88713   SSF88713        + More
SSF88688   SSF88688       
SSF74650   SSF74650       
PDB
1HXK     E-value=3.56768e-50,     Score=500

Ontologies

Topology

Length:
381
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01961
Exp number, first 60 AAs:
0.00015
Total prob of N-in:
0.01092
outside
1  -  381
 
 

Population Genetic Test Statistics

Pi
202.042086
Theta
146.612386
Tajima's D
1.229923
CLR
0.021955
CSRT
0.71936403179841
Interpretation
Uncertain
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