Gene

KWMTBOMO15307

Pre Gene Modal

BGIBMGA005143

Annotation

PREDICTED:_uncharacterized_protein_LOC106721700_[Papilio_machaon]

Location

Bomo_Chr25(-):8740070-8753236      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.946

CDS

ATGGGGATGATTTCAAGAGTGCGCGGGCGCATTAGAAGTGATTCGTTCACAAAAATTCACACACTCAAATCAGAGGACAAAATTGCGAATATTGTATGGCTTCTTTCACTTGTTTTCCTGTTGCCATTTTGGGCTCCACGAGGATTACTGGTTGCACTTGGAGGCGCATGGCTGATGGCAGCGTACACATGTTTAGTTGTTCCTGTACTAATATCAGCGAACTACCGGTATCCAGCCAGATGGTATCCAGCGGTAGCGAAAATAGTCCGAAGAGTAGCCAGAAAGCTGCGCCCATATTTTGACTGTGCCAAGAATGTTTTAAGGGTGGCGTATGCACCACTAGAACGTACAGAGAAATTATTTTTACAGATGAACAATCTCTCAACTATGATGTGTCAGTTGCTGATGTTCACAGCTTGTGATCGACTATTTCTCTCACAAGCAAAACTAACCAGTCTGTATTCCTTGATGTTCTATAACGTAGTCACCTATTCAGTTAGCTACATTCGTGAGATCTGCACGAAGGAAGACTGGTCGCCGTTTGTAAACGTAACACGACATTCCCAAGTAAAGCACCTCGCGATGTCTGCGACTAAAATCGTCCTCGAATGGACGAAAGCCATCACATTCATAGTGACAATCACTTTTATACTCCTTGCCTTTGGATTAGAACAAGGCTTGGAGCACTATCGGCCGACGGCACTGTACACCGTGACTACCGGCATCTATTACTTGTTATCAGAGAGAACGTTTTTAGAATTGTGGCCGATTGCTATTTCGGCGCTAAAGCTAGAAAGACTAGAAGGCATGGAAACATTGTACTTCGGAGTTTGGGCGCGGGGTGTGACTACAGCGTTGGCCGTGCCTCTAGTGCCAGCTTTGGCCTGGTGTGGCCGTTGGCGATTGGCTATATTGGTGCTGTACCTGTGTGTATTCGTTCACGGCAGACATCGTCTCGGAGAAGCGCTGATAAAGTTGAATGAAGCTAGAGGGTCCCTGGCGAAATTCAGACGTGCAACTTCACAGGAGCTGGCCACTTTGGAAGACGTTTGCGCCGTGTGCCTAGGTGCCATGAGGTCTGCACGAGTCACGCCTTGCGCTCACTATTTCCACGCTGACTGCTTGAGAAGATGCCTTGCCGCTTCGGATAGATGCCCCATTTGTGTCAGACCTTATGTATTTTGCTGA

Protein

MGMISRVRGRIRSDSFTKIHTLKSEDKIANIVWLLSLVFLLPFWAPRGLLVALGGAWLMAAYTCLVVPVLISANYRYPARWYPAVAKIVRRVARKLRPYFDCAKNVLRVAYAPLERTEKLFLQMNNLSTMMCQLLMFTACDRLFLSQAKLTSLYSLMFYNVVTYSVSYIREICTKEDWSPFVNVTRHSQVKHLAMSATKIVLEWTKAITFIVTITFILLAFGLEQGLEHYRPTALYTVTTGIYYLLSERTFLELWPIAISALKLERLEGMETLYFGVWARGVTTALAVPLVPALAWCGRWRLAILVLYLCVFVHGRHRLGEALIKLNEARGSLAKFRRATSQELATLEDVCAVCLGAMRSARVTPCAHYFHADCLRRCLAASDRCPICVRPYVFC

Uniprot

A0A194RKM3   A0A3S2LWK1   A0A194PI66   A0A2W1BPL0   A0A2H1VG60   A0A212F8Y6   + More
A0A0L7LIY3   A0A139WH61   A0A067R401   A0A1B6K443   A0A1B6JAG1   A0A1Y1LUH8   A0A1W4WYG9   A0A2P8XML8   A0A0C9Q6W5   A0A1B6MLX8   A0A195C8B2   E1ZXL5   A0A195BGT8   A0A158P047   E9ISY6   A0A026WPG8   F4X3T8   A0A195F282   A0A195DZX3   A0A151XJK7   E2BLK0   A0A0L7QXS3   A0A0J7L1H1   U4UMW3   N6U0D1   A0A2R7W8F8   A0A232ERB7   A0A0A9XQN7   A0A088A2Z1   T1INZ9   A0A1B6F204   T1HHK5   K7JI91   A0A1B6DMJ4   A0A1B6C7I7   A0A293MXG3   A0A1Z5KWU9   A0A2R5LA60   A0A3Q0J538   A0A1E1XJZ1   A0A1E1XGQ9   A0A226DXE8   L7MD84   A0A1D2MVI3   A0A1W4WYM0   N6TRW2   U4UG75   D6WME6   A0A067QLC0   A0A2P8YBG7   A0A2J7QH93   A0A2J7QHA0   A0A1B6LLC7   A0A1B6DQU8  

Pubmed

26354079    28756777    22118469    26227816    18362917    19820115    + More
24845553    28004739    29403074    20798317    21347285    21282665    24508170    30249741    21719571    23537049    28648823    25401762    26823975    20075255    28528879    29209593    28503490    25576852    27289101   

EMBL

KQ460045    KPJ18087.1    RSAL01000001    RVE55281.1    KQ459604    KPI92419.1    + More
KZ150095    PZC73623.1    ODYU01002367    SOQ39776.1    AGBW02009658    OWR50202.1    JTDY01000926    KOB75407.1    KQ971343    KYB27302.1    KK852718    KDR17789.1    GECU01008508    GECU01001477    JAS99198.1    JAT06230.1    GECU01011485    JAS96221.1    GEZM01047960    JAV76681.1    PYGN01001711    PSN33247.1    GBYB01009848    JAG79615.1    GEBQ01008308    GEBQ01003098    JAT31669.1    JAT36879.1    KQ978081    KYM97072.1    GL435066    EFN74098.1    KQ976490    KYM83367.1    ADTU01005352    ADTU01005353    GL765434    EFZ16299.1    KK107139    QOIP01000003    EZA57868.1    RLU24668.1    GL888624    EGI58885.1    KQ981856    KYN34491.1    KQ979955    KYN18460.1    KQ982074    KYQ60517.1    GL449033    EFN83437.1    KQ414704    KOC63351.1    LBMM01001273    KMQ96607.1    KB632281    ERL91335.1    APGK01054087    KB741247    ENN71997.1    KK854419    PTY15708.1    NNAY01002666    OXU20826.1    GBHO01044024    GBHO01022489    GBHO01022487    GBHO01022486    GBHO01022485    GBRD01015079    GBRD01015077    GBRD01015076    GBRD01015075    GBRD01015074    GBRD01015073    GBRD01015072    GBRD01001090    GDHC01020012    GDHC01015492    GDHC01007018    JAF99579.1    JAG21115.1    JAG21117.1    JAG21118.1    JAG21119.1    JAG50747.1    JAP98616.1    JAQ03137.1    JAQ11611.1    JH431232    GECZ01025565    JAS44204.1    ACPB03011203    GEDC01010420    JAS26878.1    GEDC01028073    JAS09225.1    GFWV01020784    MAA45512.1    GFJQ02007532    JAV99437.1    GGLE01002209    MBY06335.1    GFAA01004008    JAT99426.1    GFAC01000967    JAT98221.1    LNIX01000009    OXA49943.1    GACK01002853    JAA62181.1    LJIJ01000475    ODM97069.1    APGK01054088    ENN72000.1    ERL91338.1    EFA04260.2    KK853186    KDR10081.1    PYGN01000730    PSN41586.1    NEVH01013984    PNF27954.1    PNF27956.1    GEBQ01015432    JAT24545.1    GEDC01009234    JAS28064.1   

Proteomes

UP000053240    UP000283053    UP000053268    UP000007151    UP000037510    UP000007266    + More
UP000027135    UP000192223    UP000245037    UP000078542    UP000000311    UP000078540    UP000005205    UP000053097    UP000279307    UP000007755    UP000078541    UP000078492    UP000075809    UP000008237    UP000053825    UP000036403    UP000030742    UP000019118    UP000215335    UP000005203    UP000015103    UP000002358    UP000079169    UP000198287    UP000094527    UP000235965   

Pfam

PF13639   zf-RING_2        + More
PF00097   zf-C3HC4
PF04218   CENP-B_N

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR001841   Znf_RING       
IPR011016   Znf_RING-CH       
IPR018957   Znf_C3HC4_RING-type       
IPR007889   HTH_Psq       
IPR009057   Homeobox-like_sf       

SUPFAM

SSF46689   SSF46689       

Gene 3D

3.30.40.10    

ProteinModelPortal

A0A194RKM3   A0A3S2LWK1   A0A194PI66   A0A2W1BPL0   A0A2H1VG60   A0A212F8Y6   + More
A0A0L7LIY3   A0A139WH61   A0A067R401   A0A1B6K443   A0A1B6JAG1   A0A1Y1LUH8   A0A1W4WYG9   A0A2P8XML8   A0A0C9Q6W5   A0A1B6MLX8   A0A195C8B2   E1ZXL5   A0A195BGT8   A0A158P047   E9ISY6   A0A026WPG8   F4X3T8   A0A195F282   A0A195DZX3   A0A151XJK7   E2BLK0   A0A0L7QXS3   A0A0J7L1H1   U4UMW3   N6U0D1   A0A2R7W8F8   A0A232ERB7   A0A0A9XQN7   A0A088A2Z1   T1INZ9   A0A1B6F204   T1HHK5   K7JI91   A0A1B6DMJ4   A0A1B6C7I7   A0A293MXG3   A0A1Z5KWU9   A0A2R5LA60   A0A3Q0J538   A0A1E1XJZ1   A0A1E1XGQ9   A0A226DXE8   L7MD84   A0A1D2MVI3   A0A1W4WYM0   N6TRW2   U4UG75   D6WME6   A0A067QLC0   A0A2P8YBG7   A0A2J7QH93   A0A2J7QHA0   A0A1B6LLC7   A0A1B6DQU8  

PDB

4LAD     E-value=6.36927e-09,     Score=145

KEGG

101744968    no KO assigned | (RefSeq) uncharacterized LOC101744968

GO

GO:0016021   GO:0012505   GO:0061630   GO:0008270   GO:0016874   GO:0046872   GO:0003677   GO:0005515   GO:0016579   GO:0005524   GO:0016887   GO:0003688   GO:0005634   GO:0006270   GO:0042555   GO:0015930  

Length:

395

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

101.52745

Exp number, first 60 AAs:

28.60422

Total prob of N-in:

0.99670

POSSIBLE N-term signal

sequence

inside

1  -  27

TMhelix

28  -  45

outside

46  -  48

TMhelix

49  -  71

inside

72  -  199

TMhelix

200  -  222

outside

223  -  275

TMhelix

276  -  298

inside

299  -  395

 

 

Pi

25.722454

Theta

223.453579

Tajima's D

0.30789

CLR

0.528441

CSRT

0.456527173641318

Interpretation

Uncertain