Silkworm Genome Informatics Database

Gene

KWMTBOMO15304

Pre Gene Modal

BGIBMGA005146

Annotation

PREDICTED:_dol-P-Man:Man(7)GlcNAc(2)-PP-Dol_alpha-1?6-mannosyltransferase_[Amyelois_transitella]

Location

Bomo_Chr25(-):8645952-8652976 View in EpiBrowser

Full name

Mannosyltransferase

Location in the cell

PlasmaMembrane Reliability : 4.364

CDS

ATGATTCAGCTTCTTTACATTGTTGCAAGCCTACATTTATTACTTTGTCCATTCACTAAAGTAGAGGAAAGTTTTAATATTCAGGCTGTGCATGATATTTTATATCACCGACATAACCTTTCAGAGTACGACCACAATGAGTTCCCGGGAGTTGTGCCGCGAACATTTATTGGTCCGCTCATTATTTCGATGCTGTGTTCTCCAGCTGTTGGTGTTTTATTTCTTTCTGGGTTCAATAAATTTTGGGTCCAATACGCGGTTCGCTTGACCCTGGCACTGACAGTAATTGTAACATGGAGTAGACTAAGGAATGTGATACAGAAACAGTTTGGAAACACTTTTGCCTGGTGGTACTCGCTCATCACAATCACTCAATTCCATTTCATGTTTTACATGAGTCGACCATTACCTAACATAATGGTATTACCCTTAGTGTTGCTGGCTTATGAGGGGTGGTTTTCTGGTAGCAACAAACAATTCATAATATCAGCAGGTGCAGCTATTGTAATATTCAGATCTGAGCTAGCAATGCTCTTTGGATTATTCCTCATTATGAATTTGTATACAAGAAAAATAGACATTAAGACGCTATTCAAAATAGTTGTACCTGCCGGAATTGGTCTGATTGCCATAACAGTGATCATAGATTCCATATTCTGGGGTCGGCTGCTGTGGCCCGAAGCGGAAGTTTTATGGTACAACACAATCTTAAACAAAAGCTCAAATTGGGGCACATTACCATTCCTATGGTATTTCTATTCAGCTCTGCCCCGTGGCCTTGGACCAAGCTTTATACTCATTCCAGTCGGCGTTTACCTAGACAGAAGACTTGTACCAGTTATAGCCCTATCTTTTTCTTATATACTTCTATATTCGTTTCTTCCACACAAGGAACTTCGATTTATTATTTACGTGTTTCCTTTGCTCAATTTGGCTCCAGCAAGTGTTATTTCTCATGTATACGTGCGGAGACAAAAAGCGCCTGTTTATGAATTATGTTTTTGGGCATCAATCTTAGTTCTCATCGGCAACTTGATTATGACTTTAGCTTTCGTTTTAGTCGCTATGACCAATTACCCAGGTGGTGCAGCAATTACAAGGTTCCACAAATTGGTGAAAAATGAGCCATACGTGAATGTACACATTTGCAATCTCGCGGCTCAAACTGGAGTTTCTCGTTTCACTCAAATTCACGATAATTGGTTGTATAATAAAACTGAAAATTTAGAACCACATCAGCTCGAAGACTACACTCATCTCTTAATTGAAGCTAAAAGCAAATATTCATCGAGTGTCAAAGCATTATCTGAAAGCCACGAAATCTTAGATAGCATTGAATCGTTTTCACATATCACTATAAATTATAAGTTTATACCACCAATAAAAATAAAGACAAAACCTGCCCTGTTCATTTTAGAGAGAAAGAATTTTAGAGAATATCCATATGGGCTAGTGAAAGATGATGGTAATCTGCCATATAGTATTGAAAATGAAATATTAACAAACGAAGATTCACTGGAACAAAAAGAGTTATTATATGACATAAATGAAGAAAACATTGAAACTCATGCCTTAGATAATTCTCATGAAGTTAATGAGAAAATTGTTACAATAAAAAACGTGGAACAGGTAACTAATGTGTTGATAGTAGATAGTACTGCTCCTGATGTTCCCAAAACATCGGAAGATCTTAAAGAAGATGTCTCAGCAGAAATCAAAGATAGGTTAACGAAAGAAGATTCGTCAAAATTAAAAGCCAAAAAAGCCTTTGATGACTTAAAATTGTTAAGGCAAGCCAGGAAAAAGAAAGCCATTGAAAAAATTAAAACGGAAACTCGCAAAGAAGTCGTTCAATCGGCAAAAGATAAACTAAGAGAAATAATGAAACGCCACCAACATATCGCTGAAGAAATATCAGAAAAAAAAGATATCATATCAGAAGTGTTAGTTTTGGATGACTCTGTAAGTAAACCAGAAGAAGACGGAAGAGGAGATATACCGGAATTAGAAGATGTACGTGGTGAAGAAGAGTTAGAAAATCAAGATCATACAGAACCACCCAAAGAAACATTGGGAAACATAGTTGAACTAAGCGAAGAAAATCCTACGAACGAAAATCTAGATGCTATAGTAGAAGAGGTTATAGTGAGACTTATAGATAGAAAAATATATGATGATAAAACAAAACCAGAAGATATTAAGGCTGAAGATAGAAAGATGATACAAAAAATTGTAGAAGAAGTTATCTCTGAACGAATGAATTATACTAAAAGTGAGACTTGA

Protein

MIQLLYIVASLHLLLCPFTKVEESFNIQAVHDILYHRHNLSEYDHNEFPGVVPRTFIGPLIISMLCSPAVGVLFLSGFNKFWVQYAVRLTLALTVIVTWSRLRNVIQKQFGNTFAWWYSLITITQFHFMFYMSRPLPNIMVLPLVLLAYEGWFSGSNKQFIISAGAAIVIFRSELAMLFGLFLIMNLYTRKIDIKTLFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGTLPFLWYFYSALPRGLGPSFILIPVGVYLDRRLVPVIALSFSYILLYSFLPHKELRFIIYVFPLLNLAPASVISHVYVRRQKAPVYELCFWASILVLIGNLIMTLAFVLVAMTNYPGGAAITRFHKLVKNEPYVNVHICNLAAQTGVSRFTQIHDNWLYNKTENLEPHQLEDYTHLLIEAKSKYSSSVKALSESHEILDSIESFSHITINYKFIPPIKIKTKPALFILERKNFREYPYGLVKDDGNLPYSIENEILTNEDSLEQKELLYDINEENIETHALDNSHEVNEKIVTIKNVEQVTNVLIVDSTAPDVPKTSEDLKEDVSAEIKDRLTKEDSSKLKAKKAFDDLKLLRQARKKKAIEKIKTETRKEVVQSAKDKLREIMKRHQHIAEEISEKKDIISEVLVLDDSVSKPEEDGRGDIPELEDVRGEEELENQDHTEPPKETLGNIVELSEENPTNENLDAIVEEVIVRLIDRKIYDDKTKPEDIKAEDRKMIQKIVEEVISERMNYTKSET

Similarity

Belongs to the glycosyltransferase 22 family.

Feature

chain Mannosyltransferase

Uniprot

A0A2A4JDA9 A0A2H1VNH9 A0A3S2P8X4 A0A194RPZ0 A0A212F8Z4 A0A194PI60 + More
A0A2W1BAT1 A0A1B6HIS6 A0A1B6IWE4 A0A1B6EF35 D6WU17 A0A182J5V6 A0A1B6FUD8 E2CAG0 A0A1Y1M8A9 A0A1B0GIN2 A0A232F1Y1 A0A336LGP7 A0A2P8YS19 A0A1B6JLL3 A0A1B0CQ27

EC Number

2.4.1.-

Pubmed

26354079 22118469 28756777 18362917 19820115 20798317 + More
28004739 28648823 29403074

EMBL

NWSH01001968 PCG69534.1 ODYU01003492 SOQ42358.1 RSAL01000001 RVE55278.1 + More
KQ460045 KPJ18091.1 AGBW02009658 OWR50198.1 KQ459604 KPI92414.1 KZ150398 PZC71024.1 GECU01033148 GECU01032170 GECU01026154 GECU01021582 GECU01015985 JAS74558.1 JAS75536.1 JAS81552.1 JAS86124.1 JAS91721.1 GECU01016503 JAS91203.1 GEDC01000824 JAS36474.1 KQ971352 EFA07360.2 GECZ01016028 JAS53741.1 GL453976 EFN75071.1 GEZM01039726 JAV81258.1 AJWK01015109 NNAY01001210 OXU24724.1 UFQT01000003 SSX17134.1 PYGN01000399 PSN47024.1 GECU01007555 JAT00152.1 AJWK01022945

Proteomes

UP000218220 UP000283053 UP000053240 UP000007151 UP000053268 UP000007266 + More
UP000075880 UP000008237 UP000092461 UP000215335 UP000245037

Pfam

PF03901 Glyco_transf_22

Interpro

IPR005599   GPI_mannosylTrfase        + More
IPR039485   ALG12
IPR020846   MFS_dom

CDD

cd06174 MFS

ProteinModelPortal

A0A2A4JDA9 A0A2H1VNH9 A0A3S2P8X4 A0A194RPZ0 A0A212F8Z4 A0A194PI60 + More
A0A2W1BAT1 A0A1B6HIS6 A0A1B6IWE4 A0A1B6EF35 D6WU17 A0A182J5V6 A0A1B6FUD8 E2CAG0 A0A1Y1M8A9 A0A1B0GIN2 A0A232F1Y1 A0A336LGP7 A0A2P8YS19 A0A1B6JLL3 A0A1B0CQ27

KEGG

101745504 K03847 alpha-1,6-mannosyltransferase [EC:2.4.1.260] | (RefSeq) dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alph

PATHWAY

00510 N-Glycan biosynthesis - Bombyx mori (domestic silkworm)
01100 Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0052824 GO:0016021 GO:0005789 GO:0006488 GO:0005788 GO:0016757 GO:0006487 GO:0005783 GO:0000030 GO:0031625 GO:0030286 GO:0005524 GO:0016887 GO:0003688 GO:0005634 GO:0006270 GO:0042555 GO:0015930

PANTHER

PTHR22760:SF1 PTHR22760

Subcellular location

Endoplasmic reticulum membrane

SignalP

Position: 1 - 23, Likelihood: 0.718769

Length:

760

Number of predicted TMHs:

8

Exp number of AAs in TMHs:

189.67745

Exp number, first 60 AAs:

5.99245

Total prob of N-in:

0.40051

outside

1 - 55

TMhelix

56 - 78

inside

79 - 109

TMhelix

110 - 132

outside

133 - 161

TMhelix

162 - 184

inside

185 - 196

TMhelix

197 - 219

outside

220 - 247

TMhelix

248 - 270

inside

271 - 276

TMhelix

277 - 294

outside

295 - 298

TMhelix

299 - 321

inside

322 - 333

TMhelix

334 - 356

outside

357 - 760

Pi

224.600997

Theta

180.624886

Tajima's D

1.077015

CLR

0.282606

CSRT

0.68031598420079

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics