Gene

KWMTBOMO15301

Pre Gene Modal

BGIBMGA005147

Annotation

PREDICTED:_anaphase-promoting_complex_subunit_2_[Plutella_xylostella]

Location

Bomo_Chr25(-):8599946-8601946      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.67 Nuclear   Reliability : 1.812

CDS

ATGGGCGAGGACATAATGTGTTCTGGTTGTGGAAACGAGTATTCCGATTGTAACTGTGCATACATTGTGAAAGTATTTCATGAAACAAATAGGAAGTTGGTGGAGTTACAATTGTTAGAAAGACTCACAGGTCAAGTTCTAACTAATTTCATCCAGTTGAGAATTCAGTCTCATATACAGAAAGTATGTACTGGCACTTTTGATGTGTCCCACATTGAAGCATTAGAAAGTTGGCTTAATACGACAGTAATGTCTTGGTTGATCAGAATTTATTGTGCTGGCTCCTCCAAACCTCCACCTGATGATAAAAATATACAAAATGCAATCTCAAGATTCAAACAGAAACTCACTTACTATCTCTATCATAGCTACACAAAAACAAGAATTGATCAGCTCTTCAACATCATTATAGAATATCCTGATTCCCAGCCTGCTGTTGATGACATCAAAATTTGTTTAGCAAAAACAGATTTGAGACCAACTCTATGTAAAAAGTTACAGAATGCATTAGAAACAAGGCTTCTTCACCCAGGCGTGAACACTCCTGACATACTCACTGCTTACATATCTACTATTAGAGCTTTGAGACACCTAGATCCTTCTGGTGTTATACTGGAAACAGTGACAAAACCTGTTCGTAATTATTTAAGAAGTAGAGAAGATACAGTGAGGAGTGTTGTGAGCAGTTTGACAGAAGAAGGTGCTGGTAGTGAGTTAGCTGAAGAGCTAGCTAAATTTGCAGCAGAAGGAGATGGCGATGCCGATAAAGATGAGGCTTGGGATGAATGGAATCCTGATCCAGTTGATGCTGATCCCAAAGTTGATTCAAATGACAGAAGAACTAATGATATTATATCTATGCTTGTTAATGTTTATGGTAGCAAGGAATTGTTTGTTAATGAATATAGAACTTTACTAGCTGATAGATTACTGGCTCAAAGTGTTATCAATACAGAAAAAGAAATTAGGTACCTGGAGCTATTAAAAATAAGATTTGGTGAATCACAATTACACTTCTGTGAAGTCATGCTTAAAGATATATCAGATTCAAAGAGAATTAATTCCTTAATACATCAGGACAAAACCATTGAGGAGCTGAATAAGAAATTTACTTCTAATGCAATGATTTTATCTGCACAGTTTTGGCCACCATTTAAAGATGAAAGTCTGGAATTACCAGAAGAAATCAAGGAACATTTTGAAGCATACACTAAATCTTATGAAGCTTTAAAAGGTAATCGAACATTAAGCTGGAAACCACACCTTGGAAATGTAAACTTAGAGATAGAAATAGGCGAAAAGAAGTTAGATCTGACAGTTTCACCTTTTAATGCGACATTGATAATGCATTTCCAAAATAAATCTGAATGGACGTTAGATGAACTCCATCAGGTGATGAAAGTTCCTATTACTATTCTGAGAAGGAAAATAACATACTGGCAATCGATGGGTTTAATAGCAGAAAAAAGTACAGATCACTTTGTTTTAGTTGAAGCTGATAATAAAGCCAGTGTACCTTCACATCAAGTACAGGAAATGATTTGTGAAGATGAAGAAACGGAGAGTGCCATGGCATCAGCACATGATCAGCGGGAAGGTGAACTGCAAGTTTTTTGGTCTTATATTGTAGGCATGTTAACAAACTTGGACTGTTTGCCTTTGGACAGAATACATCAAATGTTGAAGATGTTTGCTTCCCAAGCTCCAGGCACTGAATGCAGTCTTATGGAGCTGAGACAATTTTTAGACACAAAAGTAAGAACACATCAACTGGTACTTCAAGGAGGCATGTACAAATTGCCTAAGACATAG

Protein

MGEDIMCSGCGNEYSDCNCAYIVKVFHETNRKLVELQLLERLTGQVLTNFIQLRIQSHIQKVCTGTFDVSHIEALESWLNTTVMSWLIRIYCAGSSKPPPDDKNIQNAISRFKQKLTYYLYHSYTKTRIDQLFNIIIEYPDSQPAVDDIKICLAKTDLRPTLCKKLQNALETRLLHPGVNTPDILTAYISTIRALRHLDPSGVILETVTKPVRNYLRSREDTVRSVVSSLTEEGAGSELAEELAKFAAEGDGDADKDEAWDEWNPDPVDADPKVDSNDRRTNDIISMLVNVYGSKELFVNEYRTLLADRLLAQSVINTEKEIRYLELLKIRFGESQLHFCEVMLKDISDSKRINSLIHQDKTIEELNKKFTSNAMILSAQFWPPFKDESLELPEEIKEHFEAYTKSYEALKGNRTLSWKPHLGNVNLEIEIGEKKLDLTVSPFNATLIMHFQNKSEWTLDELHQVMKVPITILRRKITYWQSMGLIAEKSTDHFVLVEADNKASVPSHQVQEMICEDEETESAMASAHDQREGELQVFWSYIVGMLTNLDCLPLDRIHQMLKMFASQAPGTECSLMELRQFLDTKVRTHQLVLQGGMYKLPKT

Similarity

Belongs to the cullin family.

Uniprot

A0A2W1BDL6   A0A2H1VNG1   A0A2A4JCQ6   A0A0L7LM05   A0A212F8W4   A0A194RL01   + More
H9J6K5   A0A2J7PN50   A0A067R8L3   A0A1B6GKW8   A0A1B6FIH1   A0A1B6GF83   A0A194PMR1   E2ACD3   A0A023F112   A0A0A9Y699   T1HNQ8   A0A232EZD5   K7J566   A0A0J7L0T9   F4WZV1   A0A195FED4   A0A158NGM3   A0A151I8P4   A0A195B7Z7   A0A2A3EPT4   A0A0P4VWJ7   A0A088ADT4   A0A195DXK2   A0A151XAG8   A0A026WZF5   A0A0C9R8F9   E9IA33   A0A0L7QJW7   A0A1W4XK67   E0VT63   E2C9F0   A0A1B6HAS7   D6WHQ9   A0A1Y1LLF6   A0A154PHW4   A0A1W4XL28   A0A210Q1Q3   K1Q363   A0A1S3KB87   A0A1S3HPQ2   A0A1W4UZQ9   A0A1J1IRR5   Q9W1E5   B4QBF9   Q290C0   B3NQ41   B4GCG5   A0A3B0IZ35   B3MCP3   A0A3B0JIX6   A0A3B0IYV1   B4PAB8   B4J680   B4I8Y3   A0A336M6D5   A0A336KH44   A0A146L3R1   A0A3R7MSA7   A0A0L8I8M4   A0A1I8NG42   B4MRL5   B4KLY2   A0A1I8P1Z1   B4LP09   V4CRB5   A0A2H8TG57   A0A0M4EIL6   A0A0L0BQL8   T1IXP7   A0A0P4VYU1   A0A0P4W136   A0A0A1X7P6   A0A1B0CUP5   A0A0K8U519   A0A0K8UK47   A0A087TDE9   W8C8Q2   A0A2C9KE64   V9KFN7   W4YRS9   A0A2L2YGV9   A0A1A9ZZH8   A0A1A9V697   A0A1B0BW34   A0A2B4T1Z3   A0A0K2TV75   A0A1A9X9L8   A0A1A9X5T1   A0A293LQV3   A0A0T6BCR5   A0A099YR40   A0A2R5LDU8   M7ATY9   A0A091NHU4  

Pubmed

28756777    26227816    22118469    26354079    19121390    24845553    + More
20798317    25474469    25401762    28648823    20075255    21719571    21347285    27129103    24508170    30249741    21282665    20566863    18362917    19820115    28004739    28812685    22992520    10731132    12537568    12537572    12537573    12537574    12169670    16110336    17569856    17569867    26109357    26109356    17994087    22936249    15632085    17550304    26823975    25315136    23254933    26108605    25830018    24495485    15562597    24402279    26561354    23624526   

EMBL

KZ150398    PZC71026.1    ODYU01003492    SOQ42360.1    NWSH01001968    PCG69536.1    + More
JTDY01000685    KOB76226.1    AGBW02009658    OWR50195.1    KQ460045    KPJ18094.1    BABH01019861    BABH01019862    NEVH01023957    PNF17762.1    KK852811    KDR15929.1    GECZ01006738    JAS63031.1    GECZ01019825    JAS49944.1    GECZ01008654    JAS61115.1    KQ459604    KPI92410.1    GL438491    EFN68923.1    GBBI01003510    JAC15202.1    GBHO01040684    GBHO01040683    GBHO01040681    GBHO01040680    GBHO01040679    GBHO01040671    GBHO01016454    GBHO01016448    JAG02920.1    JAG02921.1    JAG02923.1    JAG02924.1    JAG02925.1    JAG02933.1    JAG27150.1    JAG27156.1    ACPB03010549    NNAY01001588    OXU23508.1    AAZX01005033    LBMM01001479    KMQ96246.1    GL888480    EGI60241.1    KQ981625    KYN39040.1    ADTU01015145    KQ978346    KYM94765.1    KQ976574    KYM80319.1    KZ288206    PBC33051.1    GDKW01001522    JAI55073.1    KQ980107    KYN17608.1    KQ982339    KYQ57362.1    KK107063    QOIP01000005    EZA61203.1    RLU23081.1    GBYB01004340    JAG74107.1    GL761961    EFZ22570.1    KQ415041    KOC58879.1    DS235759    EEB16569.1    GL453837    EFN75428.1    GECU01035901    JAS71805.1    KQ971321    EFA00073.1    GEZM01055087    JAV73160.1    KQ434916    KZC11445.1    NEDP02005240    OWF42674.1    JH817484    EKC30892.1    CVRI01000058    CRL02911.1    AE013599    AY129297    BT031326    AAF47123.1    AAM97765.1    ABY21739.1    CM000362    CM002911    EDX08477.1    KMY96196.1    CM000071    EAL25442.1    CH954179    EDV56914.1    CH479181    EDW32442.1    OUUW01000001    SPP73197.1    CH902619    EDV36277.1    SPP73196.1    SPP73195.1    CM000158    EDW92444.1    CH916367    EDW01938.1    CH480824    EDW57058.1    UFQT01000521    SSX24921.1    UFQS01000465    UFQT01000465    SSX04236.1    SSX24601.1    GDHC01017219    GDHC01007839    JAQ01410.1    JAQ10790.1    QCYY01000517    ROT84629.1    KQ416263    KOF97749.1    CH963850    EDW74754.2    CH933808    EDW09792.1    CH940648    EDW61178.1    KB199651    ESP05035.1    GFXV01001292    MBW13097.1    CP012524    ALC42647.1    JRES01001518    KNC22283.1    JH431659    GDRN01097233    JAI59164.1    GDRN01097234    JAI59163.1    GBXI01007376    JAD06916.1    AJWK01029484    AJWK01029485    AJWK01029486    GDHF01030648    JAI21666.1    GDHF01025255    JAI27059.1    KK114715    KFM63138.1    GAMC01002834    JAC03722.1    JW864170    AFO96687.1    AAGJ04157311    IAAA01029192    IAAA01029193    LAA07384.1    JXJN01021585    LSMT01000002    PFX34802.1    HACA01012231    CDW29592.1    GFWV01005468    MAA30198.1    LJIG01002245    KRT84695.1    KL885225    KGL72774.1    GGLE01003530    MBY07656.1    KB579997    EMP26420.1    KK847204    KFP88582.1   

Proteomes

UP000218220    UP000037510    UP000007151    UP000053240    UP000005204    UP000235965    + More
UP000027135    UP000053268    UP000000311    UP000015103    UP000215335    UP000002358    UP000036403    UP000007755    UP000078541    UP000005205    UP000078542    UP000078540    UP000242457    UP000005203    UP000078492    UP000075809    UP000053097    UP000279307    UP000053825    UP000192223    UP000009046    UP000008237    UP000007266    UP000076502    UP000242188    UP000005408    UP000085678    UP000192221    UP000183832    UP000000803    UP000000304    UP000001819    UP000008711    UP000008744    UP000268350    UP000007801    UP000002282    UP000001070    UP000001292    UP000283509    UP000053454    UP000095301    UP000007798    UP000009192    UP000095300    UP000008792    UP000030746    UP000092553    UP000037069    UP000092461    UP000054359    UP000076420    UP000007110    UP000092445    UP000078200    UP000092460    UP000225706    UP000092443    UP000091820    UP000053641    UP000031443   

PRIDE

H9J6K5    Q9W1E5   

Pfam

PF00888   Cullin        + More
PF08672   ANAPC2

Interpro

IPR036388   WH-like_DNA-bd_sf        + More
IPR001373   Cullin_N       
IPR036390   WH_DNA-bd_sf       
IPR014786   APC_su2_C       
IPR016158   Cullin_homology       
IPR036317   Cullin_homology_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       

SUPFAM

SSF75632   SSF75632        + More
SSF46785   SSF46785       
SSF50978   SSF50978       

Gene 3D

1.10.10.10     2.130.10.10    

ProteinModelPortal

A0A2W1BDL6   A0A2H1VNG1   A0A2A4JCQ6   A0A0L7LM05   A0A212F8W4   A0A194RL01   + More
H9J6K5   A0A2J7PN50   A0A067R8L3   A0A1B6GKW8   A0A1B6FIH1   A0A1B6GF83   A0A194PMR1   E2ACD3   A0A023F112   A0A0A9Y699   T1HNQ8   A0A232EZD5   K7J566   A0A0J7L0T9   F4WZV1   A0A195FED4   A0A158NGM3   A0A151I8P4   A0A195B7Z7   A0A2A3EPT4   A0A0P4VWJ7   A0A088ADT4   A0A195DXK2   A0A151XAG8   A0A026WZF5   A0A0C9R8F9   E9IA33   A0A0L7QJW7   A0A1W4XK67   E0VT63   E2C9F0   A0A1B6HAS7   D6WHQ9   A0A1Y1LLF6   A0A154PHW4   A0A1W4XL28   A0A210Q1Q3   K1Q363   A0A1S3KB87   A0A1S3HPQ2   A0A1W4UZQ9   A0A1J1IRR5   Q9W1E5   B4QBF9   Q290C0   B3NQ41   B4GCG5   A0A3B0IZ35   B3MCP3   A0A3B0JIX6   A0A3B0IYV1   B4PAB8   B4J680   B4I8Y3   A0A336M6D5   A0A336KH44   A0A146L3R1   A0A3R7MSA7   A0A0L8I8M4   A0A1I8NG42   B4MRL5   B4KLY2   A0A1I8P1Z1   B4LP09   V4CRB5   A0A2H8TG57   A0A0M4EIL6   A0A0L0BQL8   T1IXP7   A0A0P4VYU1   A0A0P4W136   A0A0A1X7P6   A0A1B0CUP5   A0A0K8U519   A0A0K8UK47   A0A087TDE9   W8C8Q2   A0A2C9KE64   V9KFN7   W4YRS9   A0A2L2YGV9   A0A1A9ZZH8   A0A1A9V697   A0A1B0BW34   A0A2B4T1Z3   A0A0K2TV75   A0A1A9X9L8   A0A1A9X5T1   A0A293LQV3   A0A0T6BCR5   A0A099YR40   A0A2R5LDU8   M7ATY9   A0A091NHU4  

PDB

5KHR     E-value=2.29587e-140,     Score=1280

KEGG

101745791    K03349 anaphase-promoting complex subunit 2 | (RefSeq) anaphase-promoting complex subunit 2

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0031625   GO:0006511   GO:0005680   GO:0031145   GO:0000151   GO:0061630   GO:0050804   GO:0051726   GO:0045886   GO:0030286   GO:0005524   GO:0016887   GO:0003688   GO:0005634   GO:0006270   GO:0042555   GO:0015930  

Length:

603

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06189

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00064

outside

1  -  603

 

 

Pi

226.499648

Theta

212.181554

Tajima's D

0.282449

CLR

25.942932

CSRT

0.447827608619569

Interpretation

Uncertain