SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15299
Pre Gene Modal
BGIBMGA005149
Annotation
PREDICTED:_uncharacterized_protein_LOC106136193_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 4.637
 

Sequence

CDS
ATGTGTTATTTGAATATTATATTTCTAACATGTGCATTGTTAGCAACATCAATAGCACAAAACAGCTCAAAAGATGCTATCGGATTCCCGGAAATGGAAGAAAATCCCGATTTGAGAAATAAAGAGAATCGCCAACCAGTGTTCATTCCGGCAAGATGTCCGGACAACGAATTGTTCTATCCGGGAGACCAAAAAGACGACTGGATTTGTGATTGCAGACCAGCGCACCTATATCACCCAGGAACAGACAAATGCTGGCCAGCTTTTCGACAAGGTCCATGTGAAGTCGGACAGTATCTAGTTCTTCCACAAAATTCAGTAATTCCGGTTTGCGAGCAAAACCCTTGCAACACGGATACATTAGTTCAATTGAATGGGAATTGTGAAAAATTGGGATCTATAGCTCCTTGTAATCATTTATACCCGGTATCTTCATCATTAGGAGTTAATTCTACAACATTAGTAGTTAGCTGCGTGACGCTTTCTCTTGAGACAAGGTTTACAGAAGTAATAGGAGTGCTATGTCCTCCTGGGAGTAGACGAAGTGTTAATGGTAAATGTGTTCCTACTCTTTTATAA
Protein
MCYLNIIFLTCALLATSIAQNSSKDAIGFPEMEENPDLRNKENRQPVFIPARCPDNELFYPGDQKDDWICDCRPAHLYHPGTDKCWPAFRQGPCEVGQYLVLPQNSVIPVCEQNPCNTDTLVQLNGNCEKLGSIAPCNHLYPVSSSLGVNSTTLVVSCVTLSLETRFTEVIGVLCPPGSRRSVNGKCVPTLL

Summary

EMBL
BABH01019864    KZ149994    PZC75474.1    KQ460045    KPJ18097.1    KQ459604    + More
KPI92407.1    ODYU01000559    SOQ35518.1    AGBW02009658    OWR50191.1    KQ459717    KPJ20280.1    CCAG010006669    JXJN01015848    GFDF01005936    JAV08148.1    GAKP01022068    GAKP01022066    JAC36886.1    JRES01001712    KNC20596.1    GDHF01026795    GDHF01024371    GDHF01013978    GDHF01009092    GDHF01006235    JAI25519.1    JAI27943.1    JAI38336.1    JAI43222.1    JAI46079.1    AJWK01011187    CP012526    ALC46463.1    CH954181    EDV49678.1    GL767232    EFZ13925.1    OUUW01000005    SPP80428.1    AE014297    BT025825    AAF54483.1    ABF85725.1    CH479198    EDW28026.1    CH964251    EDW83084.2    CH480815    EDW42780.1    CM000070    EAL27127.2    CM000160    EDW96759.1    CH902617    EDV42178.1    GEZM01047961    JAV76680.1    CH916373    EDV94751.1    AJVK01017930    CH940652    EDW59163.1    JTDY01000547    KOB76716.1    GAMC01017705    GAMC01017702    GAMC01017699    GAMC01017695    JAB88860.1    ADTU01005767    CM000364    EDX13534.1    KQ971371    EFA09992.1    KQ982691    KYQ52042.1    CH933806    EDW14781.2    GL888378    EGI61985.1    GL447336    EFN86542.1    KQ981200    KYN45024.1    ADTU01017112    KQ980832    KYN12398.1    KQ976394    KYM93246.1    GGFK01007900    MBW41221.1    DS231863    EDS39979.1    CH478516    EAT32848.1    GGFJ01008874    MBW58015.1    CH477898    EAT35246.1    ADMH02000156    ETN67551.1    KQ978068    KYM97610.1    GGFM01004793    MBW25544.1    GGFJ01008876    MBW58017.1    GFDL01009575    JAV25470.1    LBMM01002400    KMQ94874.1    GGFM01004807    MBW25558.1    ATLV01014443    KE524972    KFB38763.1    KQ414667    KOC64739.1    GL888087    EGI67717.1    KK107364    QOIP01000007    EZA51933.1    RLU20369.1    KY563633    ARK20042.1    KQ435863    KOX70357.1    GAPW01003598    JAC10000.1    JXUM01023189    KQ560654    KXJ81421.1    CR954257    CAJ14156.1    APCN01000909    AAAB01008987    EAA01331.4    GL442637    EFN63195.1    NNAY01000193    OXU30121.1    AXCN02001148    LJIG01022446    KRT80567.1    GGFM01006149    MBW26900.1    GGFM01006147    MBW26898.1    KQ434809    KZC06216.1    CVRI01000010    CRK88842.1    ETN67552.1    GGFJ01009188    MBW58329.1    GGFJ01009190    MBW58331.1   
Pfam
PF16033   DUF4789        + More
PF11894   Nup192
PF00018   SH3_1
PF02218   HS1_rep
Interpro
IPR031993   DUF4789        + More
IPR021827   Nup186/Nup192/Nup205       
IPR035716   Cortactin_SH3       
IPR003134   Hs1_Cortactin       
IPR001452   SH3_domain       
IPR029063   SAM-dependent_MTases       
IPR036028   SH3-like_dom_sf       
SUPFAM
SSF53335   SSF53335        + More
SSF50044   SSF50044       

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.985972
 
 
Length:
192
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.68259
Exp number, first 60 AAs:
1.64664
Total prob of N-in:
0.12722
outside
1  -  192
 
 

Population Genetic Test Statistics

Pi
197.588919
Theta
166.992125
Tajima's D
0.501058
CLR
0.511347
CSRT
0.511174441277936
Interpretation
Uncertain
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