SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15297
Pre Gene Modal
BGIBMGA005150
Annotation
PREDICTED:_ankyrin_repeat_domain-containing_protein_12_[Bombyx_mori]
Location
Bomo_Chr25(-):8528705-8539362      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.128
 

Sequence

CDS
ATGGACAAGCGCGCGACCAGCGGCAGGGGCGAACCCATTCCGAGCATCTTAAAGAAACCAAAGAGCCGACACAAGGGCGACCTCCTGGACAAGAGTACCAAGATCAAGCTCGAGAAAGTGGAGGGATCTAAGAAAGGCGGGGAGGTGAGCGCACCGTTGCCGCACGGCTGCACCCCGCTCATGTACGCCTGCCAACAGGCCGACTACAAGACTGTCGTTGAGATACTGAACAAGGATCCATCGTCTGTGCGTGTTCGTGACCGCGGCCTGCGTTGCGCGTTGCACTACTGCGCGTCTAGCGGGGCGGGCGCGAGTCAAGCGGCGAGGGCGGCTTGTGCGGACCGCGTGCTCATGGCAGCGCCAGCGCTTGCCAAAGCCCGCGACGCCGACGGACTCACACCGCTCCACCTCGCCGTTGTTCACGGAAACGTTCCGCTCGTGCAGACGCTGCTTGCCGCCGGCGCTGACGTCAACGCGACGGACGACGAGCAACATACCGTTGTTCACTGGGCGACCGTTTGTGGTGAAGTCGGTGCATTACGAGCTGTACTAGCGTCGGGGGCTGACGCGGCTACACCGGACCAGCACGGCGGATACCCATTGCACTACGCCGCACAAATGTGCGGGGCTCCAGCAGCTACTGATCACCAGAGTAGAGGGGCTGCATTAGAAATTTTGCGAGCTTTAATCAGAGAAGGAGGAGCTAAAGTAGATGTTAGAGATGCTGATGGACGTACGCCCTTATTATGGGCGGCTTCCGCAGGATCAGCAGCAGCTGTTCTCGCCTTACATCAAGCTGGAGCCAAGGTTGATGACTCTGACAGAGATGGTTTGACTGCTTTGCACTGTGCAGCAGCACGCGGACACACCGAAGCTCTAGAAACTCTGATAGGTCTGTGTGGAGCACGTGTCGATGTTTCTGATTCACACGGCTGTACGCCACTCCATTATGCTGCGGCGCTCGGACACGCTGACGCCACGGCAGCGTTGTTGCAGCATGGCGCTGACGCTCATCGACAAGACAGAAAAGGCCGCAGTCCAGCTCATACTGCTGCTGCTAAAGGTCAAATAGAAACTGTCCGTATACTTGGAGCACGGGGTGCAAACTTGTGGCTTAGAAATTCTAAAGGTGATCTACCTTTACACGAAGCTGTCGCATCTGGAAGAAGGGAACTGGTCAAATGGCTGTTAGATGGCAGACCTTCCCAAGTAAATGCAACTAATCACGAAGGTCGAACACCACTGCACATAGCCGCTGCCACTGACAACGCAGACCTTTGTCGTCTGTTATTAGATCGAGGTGTGGATGTTAATTTAGTTGCAAGATCATCTAAGAATGAACCGATCACGGCTCTCGATTGCGCCACGTCTCGTGGGCATCGTTCAACTGCAAAATATTTACAGATGCATGGAGGTTTGCCTGCCTCTAAGTTATCTAATACTCAAATTATGATTGATGGTGCGCCTATAACAGGATTACCTACACGAAAAGTCACGAGTACTAAAATAGACGTTCGTGATAGAATAAGAATAGAGAAAAGAGAAGTTGTCGAACTTTCCAGTCCTGTAGTTGAGCGCAGGCGAATAAAGGATAACAGTGACAGTGATTCTATGAGCACTATTTCATCTGATGATAGAAAAGTCACAAAAAAAAAACGTGAACACAGATATGCTGATAAATATTGTGAAAGGAGAAAGAGGTTAATGTACTGTCAAAAAAGTTTTAGCGATGGCTATGATAGTGATTTAGATGGCAAAAGTAAAAGAACGCATTACGAACGAAGTTACAGGCGCCCCAAAAAAAGCAGATCGAGGAGTGAACCCTCGAGAAAACACAAGAATAACGCAAAACATCACCGTAGATATTATAGATCAGATTCAGAAAGCTCTTCAGACACAACAACGAGCTCTTTGCATAGAAAAAAAACTAAGCGACACCGTAAGAGAAACAAGAAAAGAAAAAGTTCTTCGTCGGATAGTAGTAGTTCTGAATCTACCGAAAGAAGGAACACGAAACGTAAAGGCAAAAAAACTTCAATCCACATAGAAAACGATGAAGAGAAGCAAAGTATTAACATAATCAAATACAATCAAACGAAAGCTCAAATTCACATGGAACGTGAATCTAGTCAACAAGGCAATTCAGAAATAACTGTAACAGTAGATTCTTCAAATAATGTATCAATTGAAACGGCTAACATACCTGTGGTATCAGCAGAAGCTAAAACTGAAAACAGCTTGCAGAAAGAAACTGAATCTTTAGACATAGTAAAAGCTGCCGAAGATTCGCAAGCTGTAAACAACGAGTCGGAGTTATTAGTTGATACTCAAAAAGAAGAAATTAAACTTGATAATTCTACAACAAGTATCACAGAGAATCGATCATCCACTAATATTGAAAGTCAAGGAACATTGAGCGAAAACAATACAATGCCAGAATTGGAACAGAACCAATCTGATGATAAAGAACTTGAAGAAAAACTAAGCAAGGATTCACAAGATTCTAGCAAAGGTGATATAAGTGCTGCCACAAATTTAAAAACGGGTGAATCTGAATGCATTTCTACTATAGAAGCTACACAACATACACCACAGCGTTCATTTCAAATACTCTCTACTCCTGATGAGGCTTATAATAAAAGTCAAGAAACATTCGATGATTTAAAAAATATCTCAAATGAGTCTAGTGTCGATAAATCAGCATCTCACGATAGAGGTAGCTCACCTGTTGCGGGTCACAATCTCATGGGAGAAGAAGTTGATCATACAGTTGAACAACAGAAAACAGATGTTTCAAAAAGTGAACAAAAAGAAAATGGTGCTGAAGCTATGAAAGCCACTGATGAAAAACGAAAAGAGTTTAGCTCCACGACTGGAAGCAGTACAGAAAATTATTCCACCACAGAGAAAGGTCTTGTATCGATTCTTAAAGATAGCTCTAATAGTGAACGTGCGTTGCAACAGGTTATTATGGATACTGTCTCAGAAGAATACGATGTGAATTTACCTTTAACGCCTAAGCAAAGTAGAAAAGCATCTAGAGATAGTCAAGTAATCAGCAGATCAAATAGTATTTATGAAACAGAAAGCTACAAAGTACTTGCTGAAATAGGTGTAGAGGACACCTCTGACATTATGAAATCATTAGACATGCAAAATGACATTGAAGATGAAAAGGATATGTGTTTTGGAAGCAAATTATCAAAAGATGCAAGTATAAATGGAAGAGTTGCTAGTATAAGCGACAATGAAATTTATAGTCAAACTGAAGCAAACGGTCGAAGGAAAAAATTTAGGAAAAAGGGTCGGGCAAAAAGTAGGACAACCATTCGTTCAAAAAGCGAGGTTTCGGAGCGAGGTTATGAATCAAGCGGAATGATGGACTCTGGGTTTGAACCTAGTCCAAGAGCATTGCAACGTCGTATTGTTAGTCCCCGACTCGCAGCTTATTATCGTCAACGAAATGCAAGCGGTAAATATTCTGGGAAATCCGATAGTAGAATCCCTATTCGTAAGCCCGGAGATAAATGTGCCGTCGATATGAAATCCGTTACGCAACGAATTCAAACAAATATGAGAAGATATTATTGTGAAAGAAAAATATTTCAACATCTATTAGAGTTAAAACGTTTACAAATAAGAACAAGTAAAACAAACGAAGCAGTTTTGGTCAAAAGGGCAATAGACGAGTATAACAAATCAAGCCTAGCAAGCGTTGGACTGGGGTCTTACAACAATCCTGATTATTCCTTTAGCAGTTTTGAAAAATTTCTTTATGAAAGCCTCAGAAAGTTACAAAAAAGTGGTAAAAAACATTTAGATAATTTGCCCGAGAAACCTTTTGATTTCGACTATGGCGAGAGCGAACTGTATAAGATGACTGCAATTCCTGACAATCCATGTTTATGCACCAGCAAAACGCATAGATGCTTTCATGCGATTCATGCGTACACTGGAATACCGTGTGCTTCTTATTTACCATATAAATGGGATCACCACACTATGCCAAAACCCTCAACTACTGGTGTGACAACAAAATCTAAAGGGTTTCTTCCTAAAATCAACTCGAAGCCTCCTACTGCAACGAGTAGAGCTCACGTTACTTTAGAAGTTTCTAATGGGACAGAAAAACAATTAATTGCTTTACCAGCAGAAAAACTAGACAAAAATAAAAGATATTACGTAACATTTACCGTGAAAGGCTCCGAAACTCCTTCTGATAATGATCAAAGTTCACCGAAAGGAAAAATTAAGAATAAAAGTGGCTAA
Protein
MDKRATSGRGEPIPSILKKPKSRHKGDLLDKSTKIKLEKVEGSKKGGEVSAPLPHGCTPLMYACQQADYKTVVEILNKDPSSVRVRDRGLRCALHYCASSGAGASQAARAACADRVLMAAPALAKARDADGLTPLHLAVVHGNVPLVQTLLAAGADVNATDDEQHTVVHWATVCGEVGALRAVLASGADAATPDQHGGYPLHYAAQMCGAPAATDHQSRGAALEILRALIREGGAKVDVRDADGRTPLLWAASAGSAAAVLALHQAGAKVDDSDRDGLTALHCAAARGHTEALETLIGLCGARVDVSDSHGCTPLHYAAALGHADATAALLQHGADAHRQDRKGRSPAHTAAAKGQIETVRILGARGANLWLRNSKGDLPLHEAVASGRRELVKWLLDGRPSQVNATNHEGRTPLHIAAATDNADLCRLLLDRGVDVNLVARSSKNEPITALDCATSRGHRSTAKYLQMHGGLPASKLSNTQIMIDGAPITGLPTRKVTSTKIDVRDRIRIEKREVVELSSPVVERRRIKDNSDSDSMSTISSDDRKVTKKKREHRYADKYCERRKRLMYCQKSFSDGYDSDLDGKSKRTHYERSYRRPKKSRSRSEPSRKHKNNAKHHRRYYRSDSESSSDTTTSSLHRKKTKRHRKRNKKRKSSSSDSSSSESTERRNTKRKGKKTSIHIENDEEKQSINIIKYNQTKAQIHMERESSQQGNSEITVTVDSSNNVSIETANIPVVSAEAKTENSLQKETESLDIVKAAEDSQAVNNESELLVDTQKEEIKLDNSTTSITENRSSTNIESQGTLSENNTMPELEQNQSDDKELEEKLSKDSQDSSKGDISAATNLKTGESECISTIEATQHTPQRSFQILSTPDEAYNKSQETFDDLKNISNESSVDKSASHDRGSSPVAGHNLMGEEVDHTVEQQKTDVSKSEQKENGAEAMKATDEKRKEFSSTTGSSTENYSTTEKGLVSILKDSSNSERALQQVIMDTVSEEYDVNLPLTPKQSRKASRDSQVISRSNSIYETESYKVLAEIGVEDTSDIMKSLDMQNDIEDEKDMCFGSKLSKDASINGRVASISDNEIYSQTEANGRRKKFRKKGRAKSRTTIRSKSEVSERGYESSGMMDSGFEPSPRALQRRIVSPRLAAYYRQRNASGKYSGKSDSRIPIRKPGDKCAVDMKSVTQRIQTNMRRYYCERKIFQHLLELKRLQIRTSKTNEAVLVKRAIDEYNKSSLASVGLGSYNNPDYSFSSFEKFLYESLRKLQKSGKKHLDNLPEKPFDFDYGESELYKMTAIPDNPCLCTSKTHRCFHAIHAYTGIPCASYLPYKWDHHTMPKPSTTGVTTKSKGFLPKINSKPPTATSRAHVTLEVSNGTEKQLIALPAEKLDKNKRYYVTFTVKGSETPSDNDQSSPKGKIKNKSG

Summary

Uniprot
H9J6K8   A0A2H1V3Z1   A0A2W1BPH8   A0A3S2TU59   A0A194RJU3   A0A194PG92   + More
A0A2A4IXC4  
Pubmed
19121390    28756777    26354079   
EMBL
BABH01019865    ODYU01000559    SOQ35519.1    KZ149994    PZC75475.1    RSAL01000001    + More
RVE55310.1    KQ460045    KPJ18098.1    KQ459604    KPI92406.1    NWSH01004890    PCG64607.1   
Proteomes
UP000005204    UP000283053    UP000053240    UP000053268    UP000218220   
PRIDE
H9J6K8   
Pfam
PF12796   Ank_2
Interpro
IPR002110   Ankyrin_rpt        + More
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
SUPFAM
SSF48403   SSF48403       
Gene 3D
1.25.40.20    
CDD
cd00204  ANK
ProteinModelPortal
H9J6K8   A0A2H1V3Z1   A0A2W1BPH8   A0A3S2TU59   A0A194RJU3   A0A194PG92   + More
A0A2A4IXC4  
PDB
6MOL     E-value=7.73751e-36,     Score=382

Ontologies

KEGG
101742761    no KO assigned | (RefSeq) ankyrin repeat domain-containing protein 12
GO
GO:0005515   GO:0007018   GO:0030286   GO:0005524   GO:0016887   GO:0003688   GO:0005634   GO:0006270   GO:0042555   GO:0015930  

Topology

Length:
1422
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1676
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00768
outside
1  -  1422
 
 

Population Genetic Test Statistics

Pi
212.4
Theta
177.264079
Tajima's D
0.706859
CLR
0.359127
CSRT
0.572121393930303
Interpretation
Uncertain
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