Silkworm Genome Informatics Database

Gene

KWMTBOMO15295 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005048

Annotation

PREDICTED:_dynein_beta_chain?_ciliary-like_[Bombyx_mori]

Location

Bomo_Chr25(+):8490653-8502167 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 3.062

CDS

ATGTCGAGTCAGGTCATGCTACCCATGCCGGCTGGCGTCGAGAATATTTATCACGCGGAAGCTAGACTAAAAGAAAGTGACGGTGAAGATGTCGATTTATACCTAAAGACCAACATCGAAGGCGCTGTCATAAAATGGGCACAACAAGTTCATGATTTGCTCAAGGAAGACTCTTATATGGCCTTTAAGAGAACAAGATTCCCATTACCAACCGCCGATATAGAGTTCTATAGTACCAGACTCCGCAACCTTGAGGGCATATATTCTCAACTAAGGGATCCTCGCGTCAAGAGAATGGCCAATTATCTGGAGGAGACCCAAAGCGTTTATCTCAATTGCTTCAAGTCTATGCTAACTAATGTGGTAGCCGCCATCGTCGAGTGCCGTGACATTTACGTGTACCAAAAACCATTGATAATGCACTTTGAGACATTTGAAGGAACAGATTTTGCTGACGCGAAGAGTCTCATCCGACCCATGTTTCACTGCATCTGTCTCTTGTGGGGCAATTCAAGATATTACTGTAATATCGAAAAGCTAATTCCTTTACTTCGTGAAGTGTGTAACTTAGTTATCCAGCAGTGTACAAACTCCATAGACCCTACGGCCATATTTCAGGGAGACGCTGAAGAACAGCTTCTTAAAATAAGAAAAGCAATGAGCATTTTAAATCATTTCATTGAGACTTATGAGGTAAATCGTGACAAAGTGCATACGTTCTTTCCCGGCGGCGTGATGCCGGTCCGTTGGTCTTTCGATTTTGACCGCGTGTTCATGCGGTTCAACGTGTACATGAAGCGTTTGAAAATGATCGAGAACATTCTAGAGTCGACCGTTGAAATACTGAAGTTGGAGAAAGTTGAATTTTGCGGTCTCAGAGGCAAGATCCTGAGTACTGAATGCATGAAGGTTCTAGAAGAGTACACAATAATTTATCAAAATCTGGGTAATATGACGTACGATCCAGCCGATCCTGAAGATGAGAAGTTTCTTGCTGATTACGAAAAGCACATGGCCGTGCTAGAAGATGTTGATAGACGTCTTGCGTCTTTGTTCTCCCAAGGCTTAGACGAATGTCATAATTTAGAACATTTCTTCAAGTTCTTTCAAATCATCGGAGATTTGTTTCATCGTCCCATAATAAAAAAAGAACTGAAACCGAAACTAACGAAGTTACTGGACTTTATGCACAGTAATTTGGATGCCGTCAAAGAAATATTTGACGAAGAAATGGCTAAAATGACGAAAGGTCCGGAAAGACCGATGGTAGACGCGTATCTACCGCCAATCGGTGGTATGCTTTGGTGGATTCACAAATTGCGAAGGAGAATCCAAGCGCCCATGGAAGATTTTATTTTGTTTGAAGATCCAATAATCGAAACAGAATCCGCCTTGTACATGAAACAAAAGCACAATGAGATGCTAGGATACTTGAACGTTTTAGAGGATAGACAGTTCAAGCAATGGTGCGCCACTGTGCCGCCTATTTGCAAAACACATTTAGCAAAGAACCTTATATACAGAGATCCACCATTCGTAAGGAATAACTTTAGTCCAGAGTTGGTAATGCTTTTGAGAGAAATAAAATACATGAAGTATTTGGACAAACAAGGGATTCCGCCTGATGGCCTGGAATTGTATGGTCGTAATGAGAAGTTACAGTACGATATGAATCGCTTAAACCGTGCGATAGCCTGGTATAACGCTATTAGAGAGGGAAGCCATGAAACAGAGGTGGCGCTTATTGAGAAGGAGATTTCGGCTATTGATGAACTGCTGGGTCGCGGCGTTGAAGAACTCACCTGGAACGATGACTTCGCCGATTGGATAGCCGAAGTGTACGCGGCCATCAATACATTGCAAGAGCGTGTACTAACAGCTCAAAACAATGTCAAGCGTGGACTGGCAAACATCGCCGAATGGGGCGACAAGCCGCTACATAATCGTAAAGTAAATCCCGACAAATTAGAACTTTTGGCTGTAAACGAACGTCATCATAGATTCAGCAAGAGACGTAGCCAGATTATAGCAAGTCATGACGAGTTTCAGACTATCTTGAAAGATAATTATAAGCTATTTTTCAATATTCAAGAAGAGGAGGAGTCTGAAGATGAAGAAGAAGAATTGGAAGAAGTTGATGAAAGTACAATAGATGAAGATGAGAAAGCAGCTCGAGCTGCCAAATTAGCTGAGATCATGCAGCGGCGAGAGGAAAAAAGACTCGTCCGGGAAGAACGGGAGATGGAAAAAGCGGAGGCAGCTAGAATTAAGTTTGAAAGAAGAGAAGCGCGCAGGCTAAAAGCTGAGGAAAAAGCAGCTGAAAAAGCAGACAGACAATCAAGAAGAGATGCAGGTGAAGAGGTAGAATCTCCTGCAGAGGAAGAGGAAGAAATTGTAGACCCTGAAGAATTGGCAGATATCGAAGCGGAACGCATAGAAATGGAGGAAGAGGCTTTCAGAGCAGAACGATGGCCTGCCTATGTAGAGTATGTTGATTCATTGGTTTCTAAACAAATAATGAAAGCCATACAATCGAGTCTTGATTTATTCGAAAAACAAACAGATTTGGAGAAAGGTCCCCGAGTTGCGTTTTTGGAAATCATTGCTGAACTCAGAGATCCAGATATATTTTTCTCACCATCGCTTGATATAGACGACGAGGATGGTTTATATGATACACTCAGAGAAATGATGAAGGACATGTTCCTGCAGGCCACACTCTTTGAGAGAATCGATCCAATCGTTCCATTGGCGACTTATGAAGATGATATAGCCAGAGAGGAGGCCATGATAGATCTCTATCATGAAATATTAAAAAGAGTTGAAAACAGTATTAATGATATCGTTCAGTATGCAACGAGGTATGAAAAGTACACTCCTCTGTGGATGGAGGACAGGCAAGAAACGCTGGCTGCTTTCATGAAATACGGCCGCGTCATACCGCCGGAGGAATTTGATAAGTACAGATTTGAGAATTGCTGCGATCCCCCCGAGAGTAAACCAAGTTTAGAGCAATACCAGAAAGAGATTGACAAATATAACCTCATGTACGATGAAGTCGCGGCCCTTCCAGGCGACTATCTCTGCAACGGTTGGCTAAAACTTAACTTGAAACGATTGAACCAAGCCATTATGAATATTATATGCAAATGGAGTAATCTCTACAAACAGAATCTCAAAGACCACGTGCAGACTAGTTTGGATGATCTCGAGAAATTTATTAACTATGCATCAAAAGAATTATCAGTGGAACTGGGAGATGATGACTATGAAGGTCTTCTGAAGGTGATGCGCGTTCTTAATGAAGTCCGAGCGAAGGTAGATGCGGGCACGGAGCAGATGTTTGACCCTTTAAGGGATATTATTGATGTATTAAAGGAATACGGCGTTGATTTCCCTGAAGAGACATATGAACAGTTGGACGTCTTACCGGAGAGATGGCGTAACTTAGTTAAACTGGCAACAGTAATGAAGAACAACGTAGCACCCTTGCAAGCCGCACAAGCTGCTCTCATCGCCAAGCGAGTAGCCCTTATCAATCTACGGCTAACTATGTACAGGGAGCAGTTTAAATTGAAAGAGATGTTCTTAGAGGCTTGTAAGGAACCGTACAGGCAAATCGATAAGGTTCACCAAGAATTGCTGAATTTCGAAGAAATTGTTGACGGTCTGAAGAGATCTTGTACGCTATTTGACATACAACCTCCCGATGAGAAGAACTTGAAACAATGTAGGCGAGAAATTAAGCTTATTAAGGTAAAGGATTTTGCTAAGGATTGCCAAAATTAA

Protein

MSSQVMLPMPAGVENIYHAEARLKESDGEDVDLYLKTNIEGAVIKWAQQVHDLLKEDSYMAFKRTRFPLPTADIEFYSTRLRNLEGIYSQLRDPRVKRMANYLEETQSVYLNCFKSMLTNVVAAIVECRDIYVYQKPLIMHFETFEGTDFADAKSLIRPMFHCICLLWGNSRYYCNIEKLIPLLREVCNLVIQQCTNSIDPTAIFQGDAEEQLLKIRKAMSILNHFIETYEVNRDKVHTFFPGGVMPVRWSFDFDRVFMRFNVYMKRLKMIENILESTVEILKLEKVEFCGLRGKILSTECMKVLEEYTIIYQNLGNMTYDPADPEDEKFLADYEKHMAVLEDVDRRLASLFSQGLDECHNLEHFFKFFQIIGDLFHRPIIKKELKPKLTKLLDFMHSNLDAVKEIFDEEMAKMTKGPERPMVDAYLPPIGGMLWWIHKLRRRIQAPMEDFILFEDPIIETESALYMKQKHNEMLGYLNVLEDRQFKQWCATVPPICKTHLAKNLIYRDPPFVRNNFSPELVMLLREIKYMKYLDKQGIPPDGLELYGRNEKLQYDMNRLNRAIAWYNAIREGSHETEVALIEKEISAIDELLGRGVEELTWNDDFADWIAEVYAAINTLQERVLTAQNNVKRGLANIAEWGDKPLHNRKVNPDKLELLAVNERHHRFSKRRSQIIASHDEFQTILKDNYKLFFNIQEEEESEDEEEELEEVDESTIDEDEKAARAAKLAEIMQRREEKRLVREEREMEKAEAARIKFERREARRLKAEEKAAEKADRQSRRDAGEEVESPAEEEEEIVDPEELADIEAERIEMEEEAFRAERWPAYVEYVDSLVSKQIMKAIQSSLDLFEKQTDLEKGPRVAFLEIIAELRDPDIFFSPSLDIDDEDGLYDTLREMMKDMFLQATLFERIDPIVPLATYEDDIAREEAMIDLYHEILKRVENSINDIVQYATRYEKYTPLWMEDRQETLAAFMKYGRVIPPEEFDKYRFENCCDPPESKPSLEQYQKEIDKYNLMYDEVAALPGDYLCNGWLKLNLKRLNQAIMNIICKWSNLYKQNLKDHVQTSLDDLEKFINYASKELSVELGDDDYEGLLKVMRVLNEVRAKVDAGTEQMFDPLRDIIDVLKEYGVDFPEETYEQLDVLPERWRNLVKLATVMKNNVAPLQAAQAALIAKRVALINLRLTMYREQFKLKEMFLEACKEPYRQIDKVHQELLNFEEIVDGLKRSCTLFDIQPPDEKNLKQCRREIKLIKVKDFAKDCQN

Uniprot

A0A2W1BQS9 A0A194RL06 A0A212F8Y5 H9J6A7 A0A0L7LVC6

Pubmed

28756777 26354079 22118469 19121390 26227816

EMBL

KZ149994 PZC75477.1 KQ460045 KPJ18099.1 AGBW02009658 OWR50188.1 + More
BABH01019865 JTDY01000014 KOB79417.1

Proteomes

UP000053240 UP000007151 UP000005204 UP000037510

PRIDE

H9J6A7

Pfam

PF17852   Dynein_AAA_lid        + More
PF17857   AAA_lid_1
PF12777   MT
PF08385   DHC_N1
PF12780   AAA_8
PF08393   DHC_N2
PF12774   AAA_6
PF18198   AAA_lid_11
PF03028   Dynein_heavy
PF18199   Dynein_C
PF12781   AAA_9

Interpro

IPR035699   AAA_6        + More
IPR013594   Dynein_heavy_dom-1
IPR013602   Dynein_heavy_dom-2
IPR041466   Dynein_AAA5_ext
IPR027417   P-loop_NTPase
IPR024317   Dynein_heavy_chain_D4_dom
IPR024743   Dynein_HC_stalk
IPR041589   DNAH3_AAA_lid_1
IPR042222   Dynein_2_N
IPR041658   AAA_lid_11
IPR041228   Dynein_C
IPR042228   Dynein_2_C
IPR004273   Dynein_heavy_D6_P-loop
IPR042219   AAA_lid_11_sf
IPR035706   AAA_9

SUPFAM

SSF52540 SSF52540

Gene 3D

1.20.140.100 1.10.8.720 3.20.180.20

ProteinModelPortal

A0A2W1BQS9 A0A194RL06 A0A212F8Y5 H9J6A7 A0A0L7LVC6

KEGG

101742915 K10408 dynein heavy chain, axonemal | (RefSeq) dynein beta chain, ciliary-like

GO

GO:0003777 GO:0005524 GO:0007018 GO:0030286

Length:

1262

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04753

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00039

outside

1 - 1262

Pi

250.390972

Theta

21.248703

Tajima's D

1.079041

CLR

0.019872

CSRT

0.692515374231288

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics