SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15289
Pre Gene Modal
BGIBMGA005153
Annotation
N-alpha-acetyltransferase_40?_NatD_catalytic_subunit_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 1.961
 

Sequence

CDS
ATGGATGGAGCTTATTTCAACAAACTAATAGTTTACATTCGATTAGACAGCGTCCGTTACGAGGTGCAGGTAGAGAAGGGCGGGCGTCGTCGCGGGCTCGGCCAGCGCGTCCTCAGCGTGCTGGAGAAGCTTGCCCGCGCCACCCACATGCGTTGCGTGCGTCTCACTGCGCTCACGCACAATCCCTCCGCCGCCGAATTCTTCAAGGCTTGCGGATACAGTATAGACGAGACGAGTCCTCCAAAAGACGAAGCGGCTCATTACGAGATCTTAAGCAAGGCAACTGTTAAATCAACAGATGAAAGTGCCGTGAAGGTACATAGAACCATGCGATTTGTTAGATCGCTACCTACCACTGGTTGTGTCTAA
Protein
MDGAYFNKLIVYIRLDSVRYEVQVEKGGRRRGLGQRVLSVLEKLARATHMRCVRLTALTHNPSAAEFFKACGYSIDETSPPKDEAAHYEILSKATVKSTDESAVKVHRTMRFVRSLPTTGCV

Summary

Pfam
PF00583   Acetyltransf_1
Interpro
IPR000182   GNAT_dom        + More
IPR016181   Acyl_CoA_acyltransferase       
IPR039949   NAA40       
SUPFAM
SSF55729   SSF55729       
PDB
4U9V     E-value=1.29367e-06,     Score=118

Ontologies

Topology

Length:
122
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00037
Exp number, first 60 AAs:
0.00025
Total prob of N-in:
0.14163
outside
1  -  122
 
 

Population Genetic Test Statistics

Pi
243.011705
Theta
153.072371
Tajima's D
0.994663
CLR
0.003495
CSRT
0.660316984150792
Interpretation
Uncertain
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