SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15284
Pre Gene Modal
BGIBMGA005043
Annotation
PREDICTED:_protein_gar2_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.837
 

Sequence

CDS
ATGGACGCGGATAATCTTATCATAGAAGATGGCGAACCGACGCAATCACCAGTGGTCGGGGCGCCATCCATCGTTGAAAAACAGAAACCGGCTAGCGTTGACGGAAACGTCAAAAAGAAAAGGAGACGCGCGAATACCAAACGTAAAGTTATGACGCCTTTTGTAAAAGCTCCTTGGCGTGATAGGAGGAGAAACGAAAAACCTAAAAGAAATAATCGCTTTCGTAAAATTGTTTTGACGAAAACTCATGCCCCGTTCAACAATAATCAATTTTTGATGGAAATTCACAAACCTGAACCCGAAAATGCGTTCAATATACTTCAGACGCCTTCAGCACGCACTCGTGATTCCAGTTTTAGTGTAGATTCAGATGATAACTATTTTTATGCTCTGCCTGAAGACGAAGAAGAATATTTGACAAAAGAATTTTCAAGCGTGTATGAGGATGCGCAATGTGAGCGTCTATCAAATATGACAAAAAACGAACTTATACAAGAATATCTTCTGTTAGAGGCAAAGTTTGAAAACCTTGTAAAAAGGACTGAGCGCTCGAAGATGAAACGAATGGAGGAAGATAAAGACAATAGCACTGACAGAGATGCGTCGATTGCAGATAAAGATAGTATGGTGACTGACAGAGATACATCTGAGACTTCTGTTGAAACATTTACCGCAGAGGATCCGCCTTCAAACGAAATCTGGCAACGCCTTAAAGACCAAGAAGATCAAATAAGAGAGTTGCAAATCTCAAATGAAAAGCTTTTATTGGAAAATGAACATTTAAGACAAAGGCAACATAACTCTAGTGAGGATTCTGAAAGTGACAGTTCATCTACAAGTGATAGTAATAGTTCAAGTGGAAGTGAAAAAGTTGTGGATGAACCAGTGGTCCAAAATGAACCTGTCAATGATATCGCTCAACCAAATGGATGCCAAGAATTTGAAATCCTAGAAAATCCAATTCCCCTTGTGAATGGGTTCCATACTAAGGATTAG
Protein
MDADNLIIEDGEPTQSPVVGAPSIVEKQKPASVDGNVKKKRRRANTKRKVMTPFVKAPWRDRRRNEKPKRNNRFRKIVLTKTHAPFNNNQFLMEIHKPEPENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLKDQEDQIRELQISNEKLLLENEHLRQRQHNSSEDSESDSSSTSDSNSSSGSEKVVDEPVVQNEPVNDIAQPNGCQEFEILENPIPLVNGFHTKD

Summary

Pfam
PF15313   HEXIM
Interpro
IPR024872   HEXIM       
PDB
2GD7     E-value=0.00303389,     Score=95

Ontologies

Topology

Length:
331
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01459
outside
1  -  331
 
 

Population Genetic Test Statistics

Pi
215.93105
Theta
205.648124
Tajima's D
0.157408
CLR
0.02877
CSRT
0.408629568521574
Interpretation
Uncertain
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