Gene

KWMTBOMO15280  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005159

Annotation

signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]

Location

Bomo_Chr25(-):8372730-8373592      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.61 Nuclear   Reliability : 1.801

CDS

ATGGTTTTATTGAGCAACGATGAGTTTCTAGCAGAGTTAACAAAACTTTTCCAAAAAGCACGATTAGCAGGATCAATCACAATGACTATGAAGAGATATGACGGCCGTAGCAAACCAATGCCTCGAGACGGAACTCCTGCAGTTAAAAATCCCGAATACAAATGCCTATTACGGGCACAATCTAAAAGTAAAAAGATATCAACAGTTGTGGAACAGCGTGATGTTGAAAAGTTCTCAACTGCATATTCTAATCTGCTGAAAACGAGTGTTAATGGCTTGAAACGCTTGAAAAAGCCCAAGAAAAAAGCAATGGCGACTCAGTAG

Protein

MVLLSNDEFLAELTKLFQKARLAGSITMTMKRYDGRSKPMPRDGTPAVKNPEYKCLLRAQSKSKKISTVVEQRDVEKFSTAYSNLLKTSVNGLKRLKKPKKKAMATQ

Uniprot

Q0N2R9   A0A1E1W449   H9J6L7   A0A2A4J2C4   A0A2H1WYW6   S4NJ47   + More
A0A194RLC1   I4DPK1   A0A194PI35   A0A0L7LGF0   A0A212FJA6   A0A2W1BUR2   A0A1Y1LJP3   D6WT83   A0A1W4XPK6   E2A848   A0A2A3EQW8   A0A087ZZQ6   E0W0A2   A0A1Z5KXQ6   A0A158NT37   N6TN85   A0A3L8DDH0   K7J957   A0A2P8YHZ9   A0A067RK01   A0A1A7YDB1   A0A023FW76   A0A1A8HG77   A0A1A8EEY8   A0A1A8PNY3   A0A1A8M3D9   A0A1A8JTH0   A0A1A8V490   A0A1E1XRV9   A0A0N5DNE0   A0A1S3P0A8   A0A224Z8S6   A0A131Z4V4   L7M5Z6   A0A131X8X4   B7QAY0   V5I2G7   A0A060WNH9   W5UMA9   A0A1S3SNS3   A0A087UQB7   A0A2C9KHX1   A0A3B1J581   A0A3Q2E4M4   A0A060WF73   B6RB61   A0A0P7ZA42   A0A0B1PKG4   A0A3P8XEZ2   A0A077Z113   K4G058   A0A232EQP0   A0A210QWI2   A0A3Q2QGL0   A0A0K8RE66   A0A3B3WP10   A0A0S7HSN9   M3ZWP3   A0A087XVF3   A0A3B3VED6   A0A3P9QC74   S4RRY0   A0A3B3RIV1   A0A3B3CFI2   K4GIG1   A0A3B3CH02   A0A1Q3EU74   Q4V9I5   A0A250Y987   A0A085MX62   A0A1B6GLV5   C9W1F3   W5N535   G3SMS7   A0A2Y9DUE0   A0A0B7AW55   A0A3Q3LQD6   A0A3Q3DKY4   E9IBD6   A0A0N0BDG3   A0A0B7AWH3   A0A224XQC8   A0A1S4EY08   T1E3B6   A0A3Q1EW71   A0A3Q1HN29   A0A3Q1BAV6   A0A3P8RK49   A0A3B4EUU4   A0A3Q2VPQ6   A0A3Q4M3M6   I3K2H9   A0A3P8UHT0   I3MQ27  

Pubmed

19121390    23622113    26354079    22651552    26227816    22118469    + More
28756777    28004739    18362917    19820115    20798317    20566863    28528879    21347285    23537049    30249741    20075255    29403074    24845553    29209593    28797301    26830274    25576852    28049606    25765539    24755649    23127152    15562597    25329095    25069045    23056606    28648823    28812685    23542700    29240929    29451363    23594743    28087693    24929829    20650005    24029695    21282665    24330624    25186727    24487278   

EMBL

DQ646412    ABH10802.1    GDQN01009296    JAT81758.1    BABH01019872    NWSH01003726    + More
PCG65886.1    ODYU01012138    SOQ58280.1    GAIX01013824    JAA78736.1    KQ460045    KPJ18115.1    AK403645    BAM19841.1    KQ459604    KPI92389.1    JTDY01001220    KOB74490.1    AGBW02008295    OWR53815.1    KZ149994    PZC75493.1    GEZM01054004    JAV73884.1    KQ971354    EFA07651.2    GL437496    EFN70393.1    KZ288194    PBC33894.1    DS235857    EEB19058.1    GFJQ02007047    JAV99922.1    ADTU01025488    APGK01058388    APGK01058389    KB741288    KB632370    ENN70695.1    ERL93728.1    QOIP01000009    RLU18515.1    AAZX01002219    PYGN01000580    PSN43885.1    KK852425    KDR24161.1    HADW01015555    HADX01006275    SBP28507.1    GBBL01002357    JAC24963.1    HAEB01006455    HAEC01015004    SBQ83221.1    HAEA01015159    SBQ43639.1    HAEH01007759    HAEI01004232    SBR82717.1    HAEF01011052    HAEG01006115    SBR51575.1    HAED01015623    HAEE01003405    SBR23425.1    HADY01005423    HAEJ01015057    SBS55514.1    GFAA01001382    JAU02053.1    GFPF01011756    MAA22902.1    GEDV01002549    JAP86008.1    GACK01006510    JAA58524.1    GEFH01004587    JAP63994.1    ABJB010519555    ABJB010921648    DS897208    EEC16002.1    GANP01000756    GEFM01001760    JAB83712.1    JAP74036.1    FR904635    CDQ68602.1    JT418787    AHH42845.1    KK121016    KFM79556.1    FR904523    CDQ65943.1    EF103407    ABO26665.1    JARO02000699    KPP77690.1    KN538445    KHJ40270.1    HG805861    CDW53629.1    JX052463    AFK10691.1    NNAY01002732    OXU20675.1    NEDP02001506    OWF53129.1    GADI01005039    JAA68769.1    GBYX01437213    JAO44134.1    AYCK01003395    JX208383    AFM86697.1    GFDL01016181    JAV18864.1    LO018432    BC096882    AAH96882.1    GFFW01004664    JAV40124.1    KL363303    KL367610    KFD48118.1    KFD61808.1    GECZ01006344    JAS63425.1    EZ406101    ACX53900.1    AHAT01019028    HACG01037396    CEK84261.1    GL762111    EFZ22053.1    KQ435863    KOX70411.1    HACG01037395    CEK84260.1    GFTR01001719    JAW14707.1    GALA01000515    JAA94337.1    AERX01018670    AGTP01002150   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000007151    + More
UP000007266    UP000192223    UP000000311    UP000242457    UP000005203    UP000009046    UP000005205    UP000019118    UP000030742    UP000279307    UP000002358    UP000245037    UP000027135    UP000046395    UP000087266    UP000001555    UP000193380    UP000221080    UP000054359    UP000076420    UP000018467    UP000265020    UP000034805    UP000192224    UP000265140    UP000030665    UP000215335    UP000242188    UP000265000    UP000261480    UP000002852    UP000028760    UP000261500    UP000242638    UP000245300    UP000261540    UP000261560    UP000000437    UP000018468    UP000007646    UP000248480    UP000261640    UP000264820    UP000053105    UP000257200    UP000265040    UP000257160    UP000265080    UP000261460    UP000264840    UP000261580    UP000005207    UP000265120    UP000005215   

PRIDE

Q0N2R9    H9J6L7   

Pfam

PF02290   SRP14        + More
PF02602   HEM4

Interpro

IPR003210   Signal_recog_particle_SRP14        + More
IPR009018   Signal_recog_particle_SRP9/14       
IPR039793   UROS/Hem4       
IPR003754   4pyrrol_synth_uPrphyn_synth       
IPR036108   4pyrrol_syn_uPrphyn_synt_sf       
IPR034804   SQR/QFR_C/D       

SUPFAM

SSF54762   SSF54762        + More
SSF69618   SSF69618       

Gene 3D

3.30.720.10     1.20.1300.10    

CDD

cd06578  HemD

ProteinModelPortal

Q0N2R9   A0A1E1W449   H9J6L7   A0A2A4J2C4   A0A2H1WYW6   S4NJ47   + More
A0A194RLC1   I4DPK1   A0A194PI35   A0A0L7LGF0   A0A212FJA6   A0A2W1BUR2   A0A1Y1LJP3   D6WT83   A0A1W4XPK6   E2A848   A0A2A3EQW8   A0A087ZZQ6   E0W0A2   A0A1Z5KXQ6   A0A158NT37   N6TN85   A0A3L8DDH0   K7J957   A0A2P8YHZ9   A0A067RK01   A0A1A7YDB1   A0A023FW76   A0A1A8HG77   A0A1A8EEY8   A0A1A8PNY3   A0A1A8M3D9   A0A1A8JTH0   A0A1A8V490   A0A1E1XRV9   A0A0N5DNE0   A0A1S3P0A8   A0A224Z8S6   A0A131Z4V4   L7M5Z6   A0A131X8X4   B7QAY0   V5I2G7   A0A060WNH9   W5UMA9   A0A1S3SNS3   A0A087UQB7   A0A2C9KHX1   A0A3B1J581   A0A3Q2E4M4   A0A060WF73   B6RB61   A0A0P7ZA42   A0A0B1PKG4   A0A3P8XEZ2   A0A077Z113   K4G058   A0A232EQP0   A0A210QWI2   A0A3Q2QGL0   A0A0K8RE66   A0A3B3WP10   A0A0S7HSN9   M3ZWP3   A0A087XVF3   A0A3B3VED6   A0A3P9QC74   S4RRY0   A0A3B3RIV1   A0A3B3CFI2   K4GIG1   A0A3B3CH02   A0A1Q3EU74   Q4V9I5   A0A250Y987   A0A085MX62   A0A1B6GLV5   C9W1F3   W5N535   G3SMS7   A0A2Y9DUE0   A0A0B7AW55   A0A3Q3LQD6   A0A3Q3DKY4   E9IBD6   A0A0N0BDG3   A0A0B7AWH3   A0A224XQC8   A0A1S4EY08   T1E3B6   A0A3Q1EW71   A0A3Q1HN29   A0A3Q1BAV6   A0A3P8RK49   A0A3B4EUU4   A0A3Q2VPQ6   A0A3Q4M3M6   I3K2H9   A0A3P8UHT0   I3MQ27  

PDB

6FRK     E-value=5.20483e-21,     Score=242

KEGG

778480    K03104 signal recognition particle subunit SRP14 | (RefSeq) signal recognition particle 14 kDa prote

PATHWAY

03060    Protein export - Bombyx mori (domestic silkworm)

GO

GO:0008312   GO:0030942   GO:0006614   GO:0005786   GO:0045047   GO:0004852   GO:0006780   GO:0016021   GO:0042493   GO:0005634   GO:0048500   GO:0016020   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

PANTHER

PTHR12013   PTHR12390  

Length:

107

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000740000000000001

Exp number, first 60 AAs:

0.0004

Total prob of N-in:

0.06221

outside

1  -  107

 

 

Pi

266.78265

Theta

206.790889

Tajima's D

0.913282

CLR

3.812116

CSRT

0.63916804159792

Interpretation

Uncertain