Gene

KWMTBOMO15278  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005040

Annotation

Transforming_acidic_coiled-coil-containing_protein_1_[Operophtera_brumata]

Location

Bomo_Chr25(+):8341473-8343178      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.415

CDS

ATGCAACAATTATCCGTAACACAGACTAGCAGTGGTTCTACTGAAAAGCCTACACAAGTGGTTACTCCTGCAGTTAACCGAAGTCAACCCTCCGCGAAAGTAACACCAGTAAAAGCTAGTACAGTTTCACCTGCTATAGCTACCATTGATAGATTGCTTAGTCTGGGTGCTAACATTCCTCCACCTCCACCTGTTATTACTCGTACTTCAGATATGGATCCCCATACAGTAGAACAATTGCGAGCCGTCAAAGAACTTCTTACTACTCAAGAAGAAGAAGCTCAAAGCTTGAGAGATCTTAATCATGAATTACGAGAGAGGCTTGAAGAATGTGAAAACAAAATAAAGAAATTGACTGAACAAAATGAAGAATATGCAGAGAAAGAAAAAGCCTTATCACAGAGAGTTGCAGAAAAAGTAAGAAACAATAAACAGATGAGTGTAGTTATGGAAGAATATGAGCGCACAATCTCTTCACTCATTGGTGAGCGTGAGATAGAGGGTAAAAGATGGACTGAGGAAAGAACTACACTTGTAAGAGAGAGAGATGAAGCGGCAGCACATCTTGCATCTATGGAGCATGCATTCAATGATGTTCATACCAAATATGAAAGATGTAAAGTTATCATTCAAGGCTATAAAAGCAATGAAGAGACACTCAAACATACCGTTGAGGAGAATAATGATGCCATACAAAAACTAGAAGCGAGGTATGAAACATTGAGGCAACATGCTATGCAGCAACTCAACAAAGCAAATGCTGAATTGGATGCCGTTAAAAAGACTCATCAGGCAGAAATTCTGAAATTAAATGCAATGCTCAAGAAAAGTGAGGTACATGCTTCATCACTGCAGGAGTCATTGGCACAGAAAATAAAAGACAATGAGGAACTCACAGCCATCTGTGATGAGCTCATTAATAAAGTAGGATAA

Protein

MQQLSVTQTSSGSTEKPTQVVTPAVNRSQPSAKVTPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTSDMDPHTVEQLRAVKELLTTQEEEAQSLRDLNHELRERLEECENKIKKLTEQNEEYAEKEKALSQRVAEKVRNNKQMSVVMEEYERTISSLIGEREIEGKRWTEERTTLVRERDEAAAHLASMEHAFNDVHTKYERCKVIIQGYKSNEETLKHTVEENNDAIQKLEARYETLRQHAMQQLNKANAELDAVKKTHQAEILKLNAMLKKSEVHASSLQESLAQKIKDNEELTAICDELINKVG

Uniprot

H9J699   A0A2H1W7H1   A0A2A4J804   A0A2W1BQU3   A0A0L7L3B5   A0A1E1WSL9   + More
A0A194PG72   A0A194RJW1   H9J5J7   A0A2W1BDY9   A0A2H1WST3   H9J697   A0A2A4JUQ1   A0A0L7KYT3   A0A194PGB5   A0A194RI24   A0A2P8YJD7   A0A1B6FB38   A0A212EV10   A0A1B6H2F4   A0A1B6GRL9   A0A2J7QA73   A0A1B6DLP1   A0A212FJD1   A0A2J7QA98   A0A1B6CGN1   A0A2J7QA67   S4P856   A0A1B6KP51   A0A2H1W7F0   A0A1B6E5C2   A0A1B6E6Y4   A0A1B6M8S8   A0A0L7QP40   A0A0N0BGA9   E2BM16   V9ID51   A0A026WRH9   A0A3L8DMJ0   K7J9K7   A0A2A3EQS5   E9IMI6   A0A154PKC5   E0VVR0   A0A087ZVJ2   A0A0V0G5Q5   A0A0K2UQ23   A0A0P4VJX4   A0A224XI21   A0A0K8SMS4   A0A232FBH8   A0A0A9YXA7   A0A0K8SXK2   A0A146LXJ0   A0A0A9ZGD0   A0A0K8SXY1   T1I0Y2   A0A0A9YZ01   A0A0K8SXL1   A0A0K8SXL4   A0A146LXB7   A0A210QVL7   A0A1I8MLY8   A0A1I8MLY5   A0A0L0C1C2   A0A3M6U6T7  

Pubmed

19121390    28756777    26227816    26354079    29403074    22118469    + More
23622113    20798317    24508170    30249741    20075255    21282665    20566863    27129103    28648823    25401762    26823975    28812685    25315136    26108605    30382153   

EMBL

BABH01019874    ODYU01006819    SOQ49020.1    NWSH01002747    PCG67580.1    KZ149994    + More
PZC75497.1    JTDY01003190    KOB69993.1    GDQN01001127    JAT89927.1    KQ459604    KPI92386.1    KQ460045    KPJ18118.1    BABH01025215    BABH01025216    BABH01025217    KZ150226    PZC72055.1    ODYU01010736    SOQ56036.1    NWSH01000636    PCG75122.1    JTDY01004414    KOB68189.1    KPI92068.1    KQ460205    KPJ16980.1    PYGN01000554    PSN44346.1    GECZ01022428    JAS47341.1    AGBW02012265    OWR45319.1    GECZ01000969    JAS68800.1    GECZ01004687    JAS65082.1    NEVH01016332    PNF25491.1    GEDC01025466    GEDC01010713    JAS11832.1    JAS26585.1    AGBW02008295    OWR53819.1    PNF25489.1    GEDC01024803    GEDC01023006    JAS12495.1    JAS14292.1    PNF25490.1    GAIX01004299    JAA88261.1    GEBQ01026770    JAT13207.1    SOQ49019.1    GEDC01010228    GEDC01004204    JAS27070.1    JAS33094.1    GEDC01016680    GEDC01003607    JAS20618.1    JAS33691.1    GEBQ01007642    JAT32335.1    KQ414832    KOC60393.1    KQ435792    KOX74298.1    GL449100    EFN83265.1    JR039152    JR039153    AEY58557.1    AEY58558.1    KK107128    EZA58296.1    QOIP01000006    RLU21627.1    AAZX01006880    KZ288193    PBC34143.1    GL764165    EFZ18217.1    KQ434924    KZC11680.1    DS235813    EEB17466.1    GECL01002744    JAP03380.1    HACA01022834    CDW40195.1    GDKW01003849    JAI52746.1    GFTR01008643    JAW07783.1    GBRD01011187    JAG54637.1    NNAY01000537    OXU27808.1    GBHO01006750    GBHO01006749    JAG36854.1    JAG36855.1    GBRD01007819    JAG58002.1    GDHC01006265    JAQ12364.1    GBRD01007813    JAG58008.1    GBRD01007810    JAG58011.1    ACPB03015536    GBHO01006753    JAG36851.1    GBRD01007809    JAG58012.1    GBRD01007808    JAG58013.1    GDHC01007332    JAQ11297.1    NEDP02001654    OWF52774.1    JRES01001032    KNC26057.1    RCHS01002149    RMX49337.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000053240    UP000245037    + More
UP000007151    UP000235965    UP000053825    UP000053105    UP000008237    UP000053097    UP000279307    UP000002358    UP000242457    UP000076502    UP000009046    UP000005203    UP000215335    UP000015103    UP000242188    UP000095301    UP000037069    UP000275408   

PRIDE

H9J699    H9J5J7    H9J697   

Pfam

PF05010   TACC_C        + More
PF08547   CIA30
PF12317   IFT46_B_C

Interpro

IPR039915   TACC        + More
IPR007707   TACC_C       
IPR013857   NADH-UbQ_OxRdtase-assoc_prot30       
IPR039131   NDUFAF1       
IPR008979   Galactose-bd-like_sf       
IPR022088   Intraflagellar_transp_cmplxB       

SUPFAM

SSF49785   SSF49785       

ProteinModelPortal

H9J699   A0A2H1W7H1   A0A2A4J804   A0A2W1BQU3   A0A0L7L3B5   A0A1E1WSL9   + More
A0A194PG72   A0A194RJW1   H9J5J7   A0A2W1BDY9   A0A2H1WST3   H9J697   A0A2A4JUQ1   A0A0L7KYT3   A0A194PGB5   A0A194RI24   A0A2P8YJD7   A0A1B6FB38   A0A212EV10   A0A1B6H2F4   A0A1B6GRL9   A0A2J7QA73   A0A1B6DLP1   A0A212FJD1   A0A2J7QA98   A0A1B6CGN1   A0A2J7QA67   S4P856   A0A1B6KP51   A0A2H1W7F0   A0A1B6E5C2   A0A1B6E6Y4   A0A1B6M8S8   A0A0L7QP40   A0A0N0BGA9   E2BM16   V9ID51   A0A026WRH9   A0A3L8DMJ0   K7J9K7   A0A2A3EQS5   E9IMI6   A0A154PKC5   E0VVR0   A0A087ZVJ2   A0A0V0G5Q5   A0A0K2UQ23   A0A0P4VJX4   A0A224XI21   A0A0K8SMS4   A0A232FBH8   A0A0A9YXA7   A0A0K8SXK2   A0A146LXJ0   A0A0A9ZGD0   A0A0K8SXY1   T1I0Y2   A0A0A9YZ01   A0A0K8SXL1   A0A0K8SXL4   A0A146LXB7   A0A210QVL7   A0A1I8MLY8   A0A1I8MLY5   A0A0L0C1C2   A0A3M6U6T7  

PDB

5NUG     E-value=0.000164296,     Score=106

KEGG

101736118    K14283 transforming acidic coiled-coil-containing protein 3 | (RefSeq) transforming acidic coiled-co

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)

GO

GO:0007052   GO:0032981   GO:0005929   GO:0042073  

PANTHER

PTHR13924   PTHR13194   PTHR13376  

Length:

310

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0006

Exp number, first 60 AAs:

0.00059

Total prob of N-in:

0.04342

outside

1  -  310

 

 

Pi

169.720086

Theta

179.48487

Tajima's D

-0.15671

CLR

0.016193

CSRT

0.327883605819709

Interpretation

Uncertain