SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15275  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005037
Annotation
PREDICTED:_N-terminal_kinase-like_protein_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.357
 

Sequence

CDS
ATGTGGTCATTTTTCTCTCGAGATCCTACAAAGGATTTTCCGTACGATGTTGGTGAACCCGTACCAGAACTGGAAGACAGAAGTGTTTGGACATTACACAAGGGGAAAAAAAGAGGTACTCAGGATGAAGTATCAATATTTTTGTTCGACGTTCAAAAGAATTCGGAGACATTGTTTGACATAGCAAAAGCTTCTCTGAAAAGATTGAAGACTACGAGACACCCTAGCCTTTTACATTATTTAGATAGCTGTGAAACTGAGAAATTTTTGTATATAGCTACTGAATATGTAGAGCCTTTATCAACTCATTTAGAATGTATGAGGCTTGAGGGTCAGCAAAAAGACCTATTTCTTGCCTGGGGCGTATTCCAAATAACTAGAGCTTTATCATTTTTAAATAATGATGGAAATATGAGACATAACAATGTATGCCTCTATTCTGTATTTGTAACATTGGCTGGTGAATGGAAACTAGGGGGATTTGAATTTCTAACAACCCAAGGACATGAAACTACGAATCCCATACCAATAAAGATATTACCTGCCCTTGAAATATATGATCCACCAGAGAAGAATGACTCTGTAAAACTTAAAAGTGCAACTAAATGTTCATCAGACATGTGGGGACTAGGATGTCTCATATGGGAGGCATTTAATGGACCGCTCAAAAACCAACCGGCTCTTAAAACAGTAGATAATATACCAAAACAGCTATGTACGCTGTACTGTGAGCTGGTCAGTGCTAACCCTGCTTCAAGACCTAACCCGGCTGATATTATTACCAGATGTCGTAAACTTGGTGGATATTTTAAAAACGATCTGATAGATACAATGTTATTCTTAGAAGAAATTCAAATTAAAGACAAAGCTGAGAAGGGAAAATTTTTCTCAAGTCTTAGTTCACATTTAGATAACTTCCCAGAAAATGTATGTGTTCATAAGATCCTGCCGCAGTTATTGACTGCCTTTCATTATGGAGACGCTGGTTCTGCTGTGTTGGCACCTATGTTTAAGCTAGGCAAATTATTAGAAGATCCCGATTACCAAAAACAAATAGTGCCCTGTGTTGTTAAACTATTCGCCTCTAATGACAGAACGACAAGATCAAGGCTTCTGCAACAACTAGACCAGTTCATTATGCATCTGCAGAATTCGACAGTTAATGACCAAATTTTCCCGCAAGTTGTAAATGGCTTCTTGGACACAAATGCTATTATTAGGGAACAAACTGTGAAATCGATTGTTCATCTCGCTTCTAAACTAAATTACAACAATCTGAACGTTGAAGTATTGCGGCACTTTGCCAGATTACAGTCTAAAGATGATCAAGGAGGAATAAGAACGAACACAACAGTCTGCCTCGGTAAGATAGCGGCGCACCTGCATCCGCAGATACGGCAGAAGGTGCTTGTGTCTGCGTTCGTTCGCTCCACGAGGGATCCCTTCCCACCGGCGCGACAAGCCGGAGTCCTGGCGCTGGCCGCCACGCAACAGTACTTCTTGCTATCAGAAGTGGCCAACAGAGTCTTGCCGGCTCTATGTCCGCTGACAATCGATCCAGAGAAACAGGTTCGCGATGCTGCCTTTAGGACGATTAGAGGCTTTCTCGGTAAACTAGAGAAAGTTTCTGAAGACCCGAGCTTAAAAGAAGGAATGGAGGCGGACGTCCACACGGCCACTCCGTCGCTAAGCAACGCGGCGGCCACGTGGGCGGGCTGGGCCGTGACCGCCGTCACCGCCAAGTTCTACCGCTCGCACTCGGACACCACGCGGGTGCAACACTCCACTAAATCTGCACTCTCTAAACCCGGATCCTTGGAGCAACCTTCGTCGAGTAGTATGTCGACGACGACGTCATCGGTGACCTCCATGACGTCACTGGAGCACAGCGAGTCGGCCTCCGACTATGATCCGGAGCACTGGGACATGGCGGCTTGGGGAGAAATCGATTCTAGTGGAGGCACGGGCGGTAGTGCGGGCAGCAGCAGTGCGCAAGCGGCGCCCGGGCTCGCGGCCCTCGACGAGGACGACTGGGACAACGAGGAGTGGGGCACGCTGCAGGAACAACCGTCCGCCAAAGCCGATCTGGTCAGTCCCTCGGAGACGTGGAATAACTCACAATGGACGGATCCGATCGTGAACAGCGCGAACGCGACGTTCGTCCGCAGCACGGCCGGCTCGAGGCTGGAGCACCGCCCCGCCGCGCACCAGAACAGCAACGACTCGCTCGGAGGCTGGGAAGACGGAGAATTCGAACCGATAGAAGAAAACGCTGATGAAAACAATGCTTCAAAGATGGACGAGTTACGAAGGAAACGAGAAGAGAGGAAATTACAAAGACAGAGAGAGATGGAAGCGCGTCGTTCCGCTCGAGCCCAGGGACCTATGAAACTGGGCACCAAGATCGCGACAGCACCGCCGCCCTTCTAG
Protein
MWSFFSRDPTKDFPYDVGEPVPELEDRSVWTLHKGKKRGTQDEVSIFLFDVQKNSETLFDIAKASLKRLKTTRHPSLLHYLDSCETEKFLYIATEYVEPLSTHLECMRLEGQQKDLFLAWGVFQITRALSFLNNDGNMRHNNVCLYSVFVTLAGEWKLGGFEFLTTQGHETTNPIPIKILPALEIYDPPEKNDSVKLKSATKCSSDMWGLGCLIWEAFNGPLKNQPALKTVDNIPKQLCTLYCELVSANPASRPNPADIITRCRKLGGYFKNDLIDTMLFLEEIQIKDKAEKGKFFSSLSSHLDNFPENVCVHKILPQLLTAFHYGDAGSAVLAPMFKLGKLLEDPDYQKQIVPCVVKLFASNDRTTRSRLLQQLDQFIMHLQNSTVNDQIFPQVVNGFLDTNAIIREQTVKSIVHLASKLNYNNLNVEVLRHFARLQSKDDQGGIRTNTTVCLGKIAAHLHPQIRQKVLVSAFVRSTRDPFPPARQAGVLALAATQQYFLLSEVANRVLPALCPLTIDPEKQVRDAAFRTIRGFLGKLEKVSEDPSLKEGMEADVHTATPSLSNAAATWAGWAVTAVTAKFYRSHSDTTRVQHSTKSALSKPGSLEQPSSSSMSTTTSSVTSMTSLEHSESASDYDPEHWDMAAWGEIDSSGGTGGSAGSSSAQAAPGLAALDEDDWDNEEWGTLQEQPSAKADLVSPSETWNNSQWTDPIVNSANATFVRSTAGSRLEHRPAAHQNSNDSLGGWEDGEFEPIEENADENNASKMDELRRKREERKLQRQREMEARRSARAQGPMKLGTKIATAPPPF

Summary

EMBL
BABH01019876    BABH01019877    ODYU01006819    SOQ49017.1    KQ460045    KPJ18120.1    + More
KQ459604    KPI92383.1    RSAL01000001    RVE55334.1    NWSH01002747    PCG67583.1    KK853153    KDR10579.1    KZ149994    PZC75500.1    NEVH01006756    PNF36417.1    GBXI01008207    JAD06085.1    PNF36420.1    GBXI01016637    JAC97654.1    PNF36419.1    GDHF01032467    JAI19847.1    CP012526    ALC48061.1    KQ971354    EFA06008.2    GDHF01021282    JAI31032.1    GAKP01002524    JAC56428.1    GEZM01055791    JAV72934.1    JRES01001623    KNC21367.1    KA648695    AFP63324.1    CH477545    EAT39222.1    CH964232    EDW81177.2    GGFM01002321    MBW23072.1    GGFJ01001636    MBW50777.1    GGFJ01001635    MBW50776.1    AXCN02002602    ADMH02001048    ETN64322.1    GGFK01002212    MBW35533.1    GAMC01005889    JAC00667.1    GFDL01003176    JAV31869.1    GFDL01003174    JAV31871.1    JXJN01017678    GFDF01006224    JAV07860.1    GFDF01006223    JAV07861.1    ATLV01015123    KE525003    KFB40085.1    CM000070    EAL27310.3    CH479179    EDW23815.1    CH940652    EDW59009.2    KRF78641.1    GEDC01007856    JAS29442.1    CH933806    EDW16251.2    KRG02027.1    JXUM01059614    JXUM01059615    JXUM01059616    KQ562062    KXJ76769.1    OUUW01000007    SPP82915.1    CH954182    EDV53186.1    CM000160    EDW98256.1    CH902623    EDV30575.2    AE014297    BT032863    AAF56933.1    ACD81877.1    AGB96462.1    CM000364    EDX14891.1    GFDL01001462    JAV33583.1    CH916377    EDV90790.1    CVRI01000069    CRL07001.1    AAAB01008976    EGK97330.1    EAA13516.5    CH480819    EDW53400.1    GANO01000123    JAB59748.1    GEDC01022454    JAS14844.1    DS235751    EEB16369.1    UFQT01000020    SSX17897.1    GEBQ01011187    JAT28790.1    GECZ01031489    JAS38280.1    KK107072    QOIP01000007    EZA60654.1    RLU20871.1    KQ977085    KYN05891.1    KQ981281    KYN43293.1    KQ979701    KYN19660.1    GL767232    EFZ14003.1    KQ434809    KZC06182.1    KQ976551    KYM80873.1    ADTU01018978    KQ982937    KYQ49106.1    GL888048    EGI68827.1    NNAY01001403    OXU24089.1    GL448037    EFN85540.1    LBMM01001164    KMQ96800.1    JR037246    AEY57662.1    KZ288194    PBC33924.1    KQ414667    KOC64723.1    KQ435863    KOX70378.1    PNF36416.1    GL440609    EFN65623.1    GDIQ01159669    JAK92056.1    GDIQ01106529    JAL45197.1   
Pfam
PF00069   Pkinase        + More
PF07714   Pkinase_Tyr
PF10607   CLTH
Interpro
IPR011009   Kinase-like_dom_sf        + More
IPR011989   ARM-like       
IPR016024   ARM-type_fold       
IPR000719   Prot_kinase_dom       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR037683   Rmd5_dRing       
IPR006594   LisH       
IPR013144   CRA_dom       
IPR006595   CTLH_C       
IPR024964   CTLH/CRA       
IPR034085   TOG       
SUPFAM
SSF48371   SSF48371        + More
SSF56112   SSF56112       
Gene 3D
PDB
3VWA     E-value=3.46116e-20,     Score=245

Ontologies

Topology

Length:
809
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0457900000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00171
outside
1  -  809
 
 

Population Genetic Test Statistics

Pi
203.865907
Theta
179.010084
Tajima's D
0.394242
CLR
0.636677
CSRT
0.486175691215439
Interpretation
Possibly Positive selection
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