Gene

KWMTBOMO15274  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005162

Annotation

mitochondrial_ribosomal_protein_L11_[Antheraea_yamamai]

Location

Bomo_Chr25(-):8293394-8295992      View in EpiBrowser

Full name

39S ribosomal protein L11, mitochondrial      

Location in the cell

Cytoplasmic   Reliability : 1.078 Mitochondrial   Reliability : 1.626 Nuclear   Reliability : 1.137

CDS

ATGAGGACCAATATTCCAGCTGGTATGGCTGCAGCTGGTCCGCCTCTAGGCCCTATGCTGGGTCAAAGGAATATCAATATAGCCGCTTTCTGTAAAGATTTTAATGAGAAGACTGCTAACATTAAGCAAGGAATACCTTTACCAACAAGAGTGAAAGTTAATTCGGATCGTTCTTATCATCTTGTAATACATCAACCACCGGCTTCATATTTTTTAAAACAAGCTGCTGGAATAAGTAAAGGAGCCATGGAACCTGTTAGAGAAACCAGTGGGAAAATAACTTTGAAGCATTTGTATGAAATAGCAAAAATAAAACAGCAGGATCCTCCTTTAGAGTGGAAATCGCTGCAAGAAATTTGTACAATGTTGATAGCCACTGCAAGAACATGTGGTATTGAAATAGTCAAAGAATTAGATCCCAAGGAATATGGTGAATTCCTTGAAGAAAGAAAGAAGATTGTCGAAGAACAAAAGAAAATGTTACAAGAGAAGCGTGAAGCTAAAATGTTGAGAACTGCATAG

Protein

MRTNIPAGMAAAGPPLGPMLGQRNINIAAFCKDFNEKTANIKQGIPLPTRVKVNSDRSYHLVIHQPPASYFLKQAAGISKGAMEPVRETSGKITLKHLYEIAKIKQQDPPLEWKSLQEICTMLIATARTCGIEIVKELDPKEYGEFLEERKKIVEEQKKMLQEKREAKMLRTA

Subunit

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.

Similarity

Belongs to the universal ribosomal protein uL11 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   RNA-mediated gene silencing   Transit peptide   Translation regulation  

Feature

chain  39S ribosomal protein L11, mitochondrial

Uniprot

H9J6M0   A0A2A4J7T6   E3UUV5   A0A194RQ17   A0A194PGF1   A0A212FJ87   + More
A0A2W1BMI4   A0A1W4V5F1   W8C6V5   B3LVG8   A0A0M4EGU4   D6WSF4   B4K8N8   B4PSS9   B4HEM7   A0A1B6CE75   D3TRM5   A0A1B0GPQ7   B3P3K0   B4LYJ4   A0A1A9VR03   A0A034WNJ0   A0A1B0EY13   Q9VFJ2   A0A0K8UGB3   A0A240SX75   Q29AH6   B4G5Z0   U5EVG4   A0A3B0JKL8   B4N936   B0X294   A0A1Y1NJY9   A0A1Q3F8D4   B4JTM0   A0A1J1I704   A0A182NGD2   A0A2M4AVW1   A0A240SXG4   A0A2M3Z8T3   A0A2M4C0B7   A0A1Y9HA95   W5JUE0   A0A1A9XI23   A0A1L8DS73   A0A182K619   A0A182F6J9   A0A0P4VRI9   R4G413   A0A182UPS0   A0A182P864   A0A182TQS5   A0A182XEJ2   A0A182LFJ1   Q7QBV9   A0A182HTD8   A0A1A9X1B2   A0A182W2Q7   A0A182LXL4   A0A0V0GBI9   A0A224XQ82   A0A1L8DS21   A0A1I8M3I2   A0A3R7MHN1   A0A182XVH9   A0A182SHQ9   Q56FC7   A0A182RY99   A0A084WA24   A0A182GUQ2   A0A1W4XKW5   A0A023F875   A0A0P4W2T6   A0A232EJ79   K7J8K5   B4QZU5   A0A1I8NMH1   Q17AX3   A0A0T6B6W8   A0A336LYI7   R4V1G6   A0A1D2NIA7   A0A0N8CWU1   A0A0A9YGR9   J3JYV3   A0A0P4Y0Y4   A0A1S3D101   J9JU73   A0A2S2PKX1   A0A2P8Y8K5   A0A336KEX6   A0A0L7LCX5   A0A2H8TFF1   A0A0K8TMF1   A0A0J7KXC0   E9G7U8   E2C8K6   A0A1B6K9S3   E2APB5   A0A2S2R1U4  

Pubmed

19121390    26354079    22118469    28756777    24495485    17994087    + More
18362917    19820115    17550304    20353571    25348373    10731132    12537572    12537569    15632085    28004739    20920257    23761445    27129103    20966253    12364791    14747013    17210077    25315136    25244985    24438588    26483478    25474469    28648823    20075255    17510324    27289101    25401762    26823975    22516182    23537049    29403074    26227816    26369729    21292972    20798317   

EMBL

BABH01019877    NWSH01002747    PCG67584.1    HM590395    ADP21464.1    KQ460045    + More
KPJ18121.1    KQ459604    KPI92382.1    AGBW02008296    OWR53796.1    KZ149994    PZC75501.1    GAMC01000907    JAC05649.1    CH902617    EDV41496.1    CP012526    ALC47654.1    KQ971352    EFA06635.1    CH933806    EDW15457.1    CM000160    EDW97575.1    CH480815    EDW42184.1    GEDC01025542    JAS11756.1    CCAG010000199    EZ424077    ADD20353.1    AJVK01059970    CH954181    EDV48888.1    CH940650    EDW68014.1    GAKP01003227    JAC55725.1    AJWK01015117    AE014297    AY094892    GDHF01026969    JAI25345.1    CM000070    EAL27374.1    CH479179    EDW23922.1    GANO01001041    JAB58830.1    OUUW01000005    SPP81353.1    CH964232    EDW81583.1    DS232283    EDS39117.1    GEZM01003091    JAV96925.1    GFDL01011239    JAV23806.1    CH916374    EDV91449.1    CVRI01000040    CRK94734.1    GGFK01011606    MBW44927.1    JXJN01015477    GGFM01004160    MBW24911.1    GGFJ01009602    MBW58743.1    AXCN02001613    ADMH02000060    ETN67957.1    GFDF01004909    JAV09175.1    GDKW01000914    JAI55681.1    ACPB03009294    GAHY01001191    JAA76319.1    AAAB01008859    EAA07476.2    APCN01000477    AXCM01000024    GECL01000792    JAP05332.1    GFTR01003192    JAW13234.1    GFDF01004910    JAV09174.1    QCYY01003877    ROT62002.1    AY961573    AAX62475.1    ATLV01022010    KE525327    KFB47068.1    JXUM01052864    JXUM01089614    KQ563783    KQ561752    KXJ73316.1    KXJ77636.1    GBBI01001274    JAC17438.1    GDRN01092256    JAI60139.1    NNAY01004077    OXU18404.1    AAZX01005531    CM000364    EDX12943.1    CH477329    EAT43398.1    LJIG01009430    KRT83096.1    UFQT01000316    SSX23146.1    KC740668    AGM32492.1    LJIJ01000032    ODN04942.1    GDIP01091119    LRGB01002076    JAM12596.1    KZS09302.1    GBHO01011347    GBRD01009940    GDHC01002657    JAG32257.1    JAG55884.1    JAQ15972.1    APGK01008500    APGK01058242    BT128434    KB741288    KB737708    KB631818    AEE63391.1    ENN70634.1    ENN82953.1    ERL86535.1    GDIP01243562    JAI79839.1    ABLF02024017    GGMR01017470    MBY30089.1    PYGN01000804    PSN40596.1    UFQS01000289    UFQT01000289    SSX02462.1    SSX22836.1    JTDY01001650    KOB73250.1    GFXV01000637    MBW12442.1    GDAI01002270    JAI15333.1    LBMM01002197    KMQ95157.1    GL732534    EFX84543.1    GL453666    EFN75736.1    GEBQ01031787    JAT08190.1    GL441504    EFN64714.1    GGMS01014119    MBY83322.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000192221    + More
UP000007801    UP000092553    UP000007266    UP000009192    UP000002282    UP000001292    UP000092444    UP000092462    UP000008711    UP000008792    UP000078200    UP000092461    UP000000803    UP000092445    UP000001819    UP000008744    UP000268350    UP000007798    UP000002320    UP000001070    UP000183832    UP000075884    UP000092460    UP000075886    UP000000673    UP000092443    UP000075881    UP000069272    UP000015103    UP000075903    UP000075885    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000091820    UP000075920    UP000075883    UP000095301    UP000283509    UP000076408    UP000075901    UP000075900    UP000030765    UP000069940    UP000249989    UP000192223    UP000215335    UP000002358    UP000000304    UP000095300    UP000008820    UP000094527    UP000076858    UP000019118    UP000030742    UP000079169    UP000007819    UP000245037    UP000037510    UP000036403    UP000000305    UP000008237    UP000000311   

PRIDE

H9J6M0    Q9VFJ2   

Pfam

PF03946   Ribosomal_L11_N        + More
PF00298   Ribosomal_L11

Interpro

IPR006519   Ribosomal_L11_bac-typ        + More
IPR036769   Ribosomal_L11_C_sf       
IPR036796   Ribosomal_L11/L12_N_sf       
IPR000911   Ribosomal_L11/L12       
IPR020783   Ribosomal_L11_C       
IPR020784   Ribosomal_L11_N       

SUPFAM

SSF46906   SSF46906        + More
SSF54747   SSF54747       

Gene 3D

1.10.10.250     3.30.1550.10    

CDD

cd00349  Ribosomal_L11

ProteinModelPortal

H9J6M0   A0A2A4J7T6   E3UUV5   A0A194RQ17   A0A194PGF1   A0A212FJ87   + More
A0A2W1BMI4   A0A1W4V5F1   W8C6V5   B3LVG8   A0A0M4EGU4   D6WSF4   B4K8N8   B4PSS9   B4HEM7   A0A1B6CE75   D3TRM5   A0A1B0GPQ7   B3P3K0   B4LYJ4   A0A1A9VR03   A0A034WNJ0   A0A1B0EY13   Q9VFJ2   A0A0K8UGB3   A0A240SX75   Q29AH6   B4G5Z0   U5EVG4   A0A3B0JKL8   B4N936   B0X294   A0A1Y1NJY9   A0A1Q3F8D4   B4JTM0   A0A1J1I704   A0A182NGD2   A0A2M4AVW1   A0A240SXG4   A0A2M3Z8T3   A0A2M4C0B7   A0A1Y9HA95   W5JUE0   A0A1A9XI23   A0A1L8DS73   A0A182K619   A0A182F6J9   A0A0P4VRI9   R4G413   A0A182UPS0   A0A182P864   A0A182TQS5   A0A182XEJ2   A0A182LFJ1   Q7QBV9   A0A182HTD8   A0A1A9X1B2   A0A182W2Q7   A0A182LXL4   A0A0V0GBI9   A0A224XQ82   A0A1L8DS21   A0A1I8M3I2   A0A3R7MHN1   A0A182XVH9   A0A182SHQ9   Q56FC7   A0A182RY99   A0A084WA24   A0A182GUQ2   A0A1W4XKW5   A0A023F875   A0A0P4W2T6   A0A232EJ79   K7J8K5   B4QZU5   A0A1I8NMH1   Q17AX3   A0A0T6B6W8   A0A336LYI7   R4V1G6   A0A1D2NIA7   A0A0N8CWU1   A0A0A9YGR9   J3JYV3   A0A0P4Y0Y4   A0A1S3D101   J9JU73   A0A2S2PKX1   A0A2P8Y8K5   A0A336KEX6   A0A0L7LCX5   A0A2H8TFF1   A0A0K8TMF1   A0A0J7KXC0   E9G7U8   E2C8K6   A0A1B6K9S3   E2APB5   A0A2S2R1U4  

PDB

6NU3     E-value=5.99879e-29,     Score=313

KEGG

101736605    K02867 large subunit ribosomal protein L11 | (RefSeq) 39S ribosomal protein L11, mitochondrial

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0003735   GO:0006412   GO:0015934   GO:0019843   GO:0005762   GO:0000027   GO:0070180   GO:0032543   GO:0031047   GO:0006417   GO:0050661   GO:0005524   GO:0016020   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

PANTHER

PTHR11661  

Subcellular location

Mitochondrion  

Length:

173

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02339

Exp number, first 60 AAs:

0.02283

Total prob of N-in:

0.24380

outside

1  -  173

 

 

Pi

132.065926

Theta

147.201676

Tajima's D

-0.564045

CLR

728.143091

CSRT

0.228038598070096

Interpretation

Uncertain