Gene

KWMTBOMO15272  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005035

Annotation

PREDICTED:_neurochondrin_homolog_[Amyelois_transitella]

Location

Bomo_Chr25(+):8282843-8285548      View in EpiBrowser

Full name

Neurochondrin homolog      

Alternative Name

dNeurochondrin

Location in the cell

Cytoplasmic   Reliability : 1.875

CDS

ATGGGTGATGTATCAGAACCAATCAAGAAATGCATACTCATCTTAAAAAATGCAAGAAGCGACACCGAAAAATTTGCTGCCCTGTTTATGGTGACGAAACTGGTAAAAAGCAAGGACTGCAATTCTACAGCGAAGAAAGCACTTTTTGAAGCCATCGGATTTCAATTCCTCAAGAAGTTGTTGACAAGCAACAGTGTAGAAGATGATTGCCCTCCGTCTGTATATAAATCGGTGGCATTATCTGTACTCACCAACTTCTGTAATGAACCTGAACTTGCAACCCATCCAGAAATGCTGGCAAACATACCAGTATTCCTTGATATAGTACAAACATCAGATAATGATGACTACGATGATAACCTTATCATTATTAGTGAAGCATACACCTGCCTACAATGCATAGCTGAACATGAAGCTGGCCAAAGAGCTCTTATTGATGTTGGTGCTATAAAGAAAATGTCTGAAATCTACTCTCACCAAAGTTTCCAGACAGATGAAGCACTAAATATCCTTGTGAAATTGGTTAGTCGCTATGGCCCTGCTGCGTGGGGAAGCGATCCTAAACCATTCCATGCATTGGTAAACAAAATTGCTTTAGATTTTGCAACAGATCAGTCAGAGAGGAAATTTGAATTAGCCACAGTACTTAGTGCACTCTTGTACAGTTGCAACAAATCTACCGTTTTGCCTGGATCATCAGATGAAACATGGCCTCAAAGTATCTACAAAGCTCTTCATGATATTCTCACAAGTAAAATAGGTAAAAATCAGAGAGATCCTGCTTTGAAGTTAGCTGCCAACATTGTTGATCTGCTTGGTATAGAATGGACTTTTAATGATGAAGAAAATCCTAAGAAATTCTTCCTACTTCTTTTACAACTTTGTGCCATTGAAGTAAGAATGCAATTGGAAGATAGAAGCTTCAAGCAAGCATTTGCTAATGGAGAGTTAGTAACTGCCTGTTTCATTGTCCTGGAATTGTCTATCAACTACATGGCTACTGATCAATTGGACTTGGAGCAAAAAGAAAAACAATCTGTTTACACTAGCTTAAAAGGAGCATTCAATGCTGTAGTTTCATTACTGACAAAAGTGTCGAATGATAAAAACAAGGATAAACTTCCAGAAGCTGAAAAAATATTTGTTGGAGCAATGGTTAGAGTGCTGTTTGCCTGGATAGCTCAAGAGACAACAGCGATGAGAGAACAAATCTACGCTTTACTGCCTTTTATGTTTTCCCTTGCCAATGATTCGTTTCATGCATACAGATCGAGAAAACTCGCTGAGAAAAATAAATCTGAAGGTGAACCATTAGATGATAACTCCGGACTCATGGGCCAAATAGATTTACTTCGTCTGATGTTACCAGCACTTTGTCACTTAGCTGTTGAAGATAAAGCCCGAGATATCATGTTTAACCTAAAACAGGAAGACATCTTATATGAAGCTATGAATTTCCACTGGTCTATTGTGCATTATAAGAAACCTCCTATTCCTAAGTCAGAAAGAGGCAAAGCTAGGACTCAACCAGAGCCAGAACTGGATCCCAAGTTATTGGAAGATATGAAGGATTCAAGAGCTGCCATGGTTAGCCTGTGCAACATTTTCATGAACCTGACAGTGTTGGCACCTAAAATTGTTGACAATAGCATGCTGTTTAACACTCTACTCAAATTCATTTTCAACAATTTACCAGAATTGAAGGACATCCCTGAAAATCTTGTCTTACATGGACACTTGGCAGTACTGGGATTACTTTTGTTCAAACAACAAGCAAACAAAGTGAAAAAGAATGATTTTTCAATTTGTAGATATATTCAATCAACTATCAGGTTTCTTTGGGATGCATACAATGTAGATGAATCAAATGATCCGACTGCTTTAGTTGTGTCCATGAGCTATAAGGAACACTGGAATGAAATTGCAGATTTATGGTTCCTAGGAATGCAGACAATGAGTGGAGTATTAACTATAGTTCCTTGGATATCAGAATTTGCTATTGAAAGTGGTTGGGCCGGTGGAATAATTGAAATGCTTGTGAAAGTTAAGATTGGTACACTGGCTCCAAACGTTAAGTCAGCCTTTGAAGATTTTCTTTGTAGATTAGTTGACTCAAACGAAAGTGTTATACCTGTCCTCAAAAAAGCAGGTGCCCTAAAAATGTGTCGGAATCATCGACTAATGGATCTTGGCAAGAAATTATTTGGTGACTAG

Protein

MGDVSEPIKKCILILKNARSDTEKFAALFMVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNEPELATHPEMLANIPVFLDIVQTSDNDDYDDNLIIISEAYTCLQCIAEHEAGQRALIDVGAIKKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGSDPKPFHALVNKIALDFATDQSERKFELATVLSALLYSCNKSTVLPGSSDETWPQSIYKALHDILTSKIGKNQRDPALKLAANIVDLLGIEWTFNDEENPKKFFLLLLQLCAIEVRMQLEDRSFKQAFANGELVTACFIVLELSINYMATDQLDLEQKEKQSVYTSLKGAFNAVVSLLTKVSNDKNKDKLPEAEKIFVGAMVRVLFAWIAQETTAMREQIYALLPFMFSLANDSFHAYRSRKLAEKNKSEGEPLDDNSGLMGQIDLLRLMLPALCHLAVEDKARDIMFNLKQEDILYEAMNFHWSIVHYKKPPIPKSERGKARTQPEPELDPKLLEDMKDSRAAMVSLCNIFMNLTVLAPKIVDNSMLFNTLLKFIFNNLPELKDIPENLVLHGHLAVLGLLLFKQQANKVKKNDFSICRYIQSTIRFLWDAYNVDESNDPTALVVSMSYKEHWNEIADLWFLGMQTMSGVLTIVPWISEFAIESGWAGGIIEMLVKVKIGTLAPNVKSAFEDFLCRLVDSNESVIPVLKKAGALKMCRNHRLMDLGKKLFGD

Similarity

Belongs to the neurochondrin family.

Keywords

Complete proteome   Reference proteome  

Feature

chain  Neurochondrin homolog

Uniprot

H9J694   A0A1E1WQZ6   A0A212FJ80   A0A2A4J775   S4PBZ7   A0A2W1BUS2   + More
A0A2H1V7M8   A0A194PMN2   A0A194RJW6   A0A0L7LCM7   A0A0T6BDV0   A0A2J7R6U3   A0A1B6ITL1   A0A067QPS7   A0A1W4XDC0   A0A1B6FY84   A0A1B6ET46   A0A182W364   A0A2M3ZGV8   A0A182QVF9   A0A2C9GQ53   A0A182KZW0   F5HLM5   A0A1Y1MPK7   A0A2M4BFF8   W5JAA3   A0A336MNV8   A0A336KV58   A0A182NCT0   A0A1J1HQ41   A0A1B6EF11   A0A084W3F4   A0A158NHS8   A0A195AX43   K7IR46   A0A182JLQ9   B0WNH7   A0A1L8DAR4   A0A151WQW5   A0A0P6ITZ8   A0A023EUZ2   A0A182PLF2   A0A182LU05   A0A154P540   A0A182FAD4   A0A182RI44   A0A1Q3FHQ8   A0A026WT97   A0A182TIF6   A0A2R7VZY0   A0A0L7R762   N6UGI8   A0A182XF49   A0A182VL51   A0A0A1X333   E2B7Q0   A0A182YQF6   A0A0K8URA3   A0A182JTL0   A0A034VYC8   A0A232F3E7   A0A139WEF0   A0A0C9RU18   A0A1S3DFP5   A0A195CB98   A0A195EGL3   A0A023F252   A0A195FEQ9   A0A3L8DG08   A0A310SG43   A0A0J7P5L4   T1PCZ6   A0A1A9WJS0   A0A1L8DAX8   A0A2A3E5Q8   E9JB80   A0A0L0CLA5   B4JUK6   B3M0V6   A0A0M9A7K3   A0A1I8NTL2   A0A1A9VCZ6   B3DNM6   A0A1B0BCQ6   A0A1A9ZE79   A0A1A9XPW8   B4PKS8   A0A1W4V411   B3P2L9   Q9VI25   A0A1B0G134   B4QYC1   B4I4G6   B4N908   A0A3B0KEV0   B4M589   E2AZQ6   B4KDG4   B4GER6   Q296S7  

Pubmed

19121390    22118469    23622113    28756777    26354079    26227816    + More
24845553    20966253    12364791    14747013    17210077    28004739    20920257    23761445    24438588    21347285    20075255    26999592    24945155    24508170    23537049    25830018    20798317    25244985    25348373    28648823    18362917    19820115    25474469    30249741    25315136    21282665    26108605    17994087    17550304    10731132    12537572    16415344    15632085   

EMBL

BABH01019878    GDQN01001707    JAT89347.1    AGBW02008296    OWR53798.1    NWSH01002747    + More
PCG67586.1    GAIX01004376    JAA88184.1    KZ149994    PZC75503.1    ODYU01000856    SOQ36254.1    KQ459604    KPI92380.1    KQ460045    KPJ18123.1    JTDY01001650    KOB73248.1    LJIG01001515    KRT85425.1    NEVH01006756    PNF36549.1    GECU01028332    GECU01017440    GECU01014839    GECU01006425    JAS79374.1    JAS90266.1    JAS92867.1    JAT01282.1    KK853153    KDR10564.1    GECZ01014614    JAS55155.1    GECZ01028640    GECZ01026310    GECZ01024691    GECZ01005985    JAS41129.1    JAS43459.1    JAS45078.1    JAS63784.1    GGFM01007045    MBW27796.1    AXCN02001583    APCN01005802    AAAB01008898    EGK97158.1    GEZM01029910    JAV85886.1    GGFJ01002550    MBW51691.1    ADMH02001950    ETN60348.1    UFQT01001426    SSX30513.1    UFQS01000550    UFQT01000550    SSX04810.1    SSX25173.1    CVRI01000017    CRK90157.1    GEDC01000776    JAS36522.1    ATLV01019967    KE525286    KFB44748.1    ADTU01016037    KQ976725    KYM76615.1    AXCP01008660    DS232010    EDS31631.1    GFDF01010535    JAV03549.1    KQ982813    KYQ50256.1    GDUN01000621    JAN95298.1    GAPW01000333    JAC13265.1    AXCM01000898    KQ434809    KZC06444.1    GFDL01007970    JAV27075.1    KK107109    EZA59168.1    KK854192    PTY12889.1    KQ414643    KOC66678.1    APGK01036250    KB740937    KB631668    ENN77767.1    ERL85158.1    GBXI01009031    JAD05261.1    GL446201    EFN88263.1    GDHF01023198    JAI29116.1    GAKP01010651    JAC48301.1    NNAY01001128    OXU25039.1    KQ971354    KYB26358.1    GBYB01011091    JAG80858.1    KQ978023    KYM98077.1    KQ978957    KYN27286.1    GBBI01003289    JAC15423.1    KQ981636    KYN38856.1    QOIP01000008    RLU19241.1    KQ764717    OAD54430.1    LBMM01000040    KMR05199.1    KA645975    AFP60604.1    GFDF01010567    JAV03517.1    KZ288379    PBC26586.1    GL770938    EFZ09910.1    JRES01000241    KNC33026.1    CH916374    EDV91176.1    CH902617    EDV43185.1    KQ435719    KOX78860.1    BT033014    ACD99578.1    JXJN01012082    CM000160    EDW97877.1    CH954181    EDV48041.1    AE014297    AY118571    CCAG010022929    CM000364    EDX11878.1    CH480821    EDW55109.1    CH964232    EDW80513.1    OUUW01000008    SPP84236.1    CH940652    EDW59800.1    GL444277    EFN61035.1    CH933806    EDW15973.1    CH479182    EDW34101.1    CM000070    EAL28380.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053240    UP000037510    + More
UP000235965    UP000027135    UP000192223    UP000075920    UP000075886    UP000075840    UP000075882    UP000007062    UP000000673    UP000075884    UP000183832    UP000030765    UP000005205    UP000078540    UP000002358    UP000075880    UP000002320    UP000075809    UP000075885    UP000075883    UP000076502    UP000069272    UP000075900    UP000053097    UP000075902    UP000053825    UP000019118    UP000030742    UP000076407    UP000075903    UP000008237    UP000076408    UP000075881    UP000215335    UP000007266    UP000079169    UP000078542    UP000078492    UP000078541    UP000279307    UP000036403    UP000095301    UP000091820    UP000242457    UP000037069    UP000001070    UP000007801    UP000053105    UP000095300    UP000078200    UP000092460    UP000092445    UP000092443    UP000002282    UP000192221    UP000008711    UP000000803    UP000092444    UP000000304    UP000001292    UP000007798    UP000268350    UP000008792    UP000000311    UP000009192    UP000008744    UP000001819   

PRIDE

H9J694    B3DNM6    Q9VI25   

Pfam

PF05536   Neurochondrin        + More
PF13419   HAD_2

Interpro

IPR016024   ARM-type_fold        + More
IPR008709   Neurochondrin       
IPR023214   HAD_sf       
IPR041492   HAD_2       
IPR036412   HAD-like_sf       
IPR006439   HAD-SF_hydro_IA       
IPR011989   ARM-like       
IPR023198   PGP-like_dom2       
IPR011950   HAD-SF_hydro_IA_CTE7       

SUPFAM

SSF48371   SSF48371        + More
SSF56784   SSF56784       

Gene 3D

3.40.50.1000     1.25.10.10     1.10.150.240    

ProteinModelPortal

H9J694   A0A1E1WQZ6   A0A212FJ80   A0A2A4J775   S4PBZ7   A0A2W1BUS2   + More
A0A2H1V7M8   A0A194PMN2   A0A194RJW6   A0A0L7LCM7   A0A0T6BDV0   A0A2J7R6U3   A0A1B6ITL1   A0A067QPS7   A0A1W4XDC0   A0A1B6FY84   A0A1B6ET46   A0A182W364   A0A2M3ZGV8   A0A182QVF9   A0A2C9GQ53   A0A182KZW0   F5HLM5   A0A1Y1MPK7   A0A2M4BFF8   W5JAA3   A0A336MNV8   A0A336KV58   A0A182NCT0   A0A1J1HQ41   A0A1B6EF11   A0A084W3F4   A0A158NHS8   A0A195AX43   K7IR46   A0A182JLQ9   B0WNH7   A0A1L8DAR4   A0A151WQW5   A0A0P6ITZ8   A0A023EUZ2   A0A182PLF2   A0A182LU05   A0A154P540   A0A182FAD4   A0A182RI44   A0A1Q3FHQ8   A0A026WT97   A0A182TIF6   A0A2R7VZY0   A0A0L7R762   N6UGI8   A0A182XF49   A0A182VL51   A0A0A1X333   E2B7Q0   A0A182YQF6   A0A0K8URA3   A0A182JTL0   A0A034VYC8   A0A232F3E7   A0A139WEF0   A0A0C9RU18   A0A1S3DFP5   A0A195CB98   A0A195EGL3   A0A023F252   A0A195FEQ9   A0A3L8DG08   A0A310SG43   A0A0J7P5L4   T1PCZ6   A0A1A9WJS0   A0A1L8DAX8   A0A2A3E5Q8   E9JB80   A0A0L0CLA5   B4JUK6   B3M0V6   A0A0M9A7K3   A0A1I8NTL2   A0A1A9VCZ6   B3DNM6   A0A1B0BCQ6   A0A1A9ZE79   A0A1A9XPW8   B4PKS8   A0A1W4V411   B3P2L9   Q9VI25   A0A1B0G134   B4QYC1   B4I4G6   B4N908   A0A3B0KEV0   B4M589   E2AZQ6   B4KDG4   B4GER6   Q296S7  

KEGG

101736830    no KO assigned | (RefSeq) neurochondrin homolog

GO

GO:0016787   GO:0016021   GO:0003012   GO:0030425   GO:0043025   GO:0005488   GO:0008270   GO:0050660   GO:0050661   GO:0005524   GO:0016020   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

PANTHER

PTHR13109  

Length:

737

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.72651

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00219

outside

1  -  737

 

 

Pi

302.159446

Theta

236.279897

Tajima's D

0.822372

CLR

0.079166

CSRT

0.609469526523674

Interpretation

Possibly Positive selection