SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15259
Annotation
PREDICTED:_phosphatidylinositol_N-acetylglucosaminyltransferase_subunit_H_isoform_X2_[Bombyx_mori]
Full name
Phosphatidylinositol N-acetylglucosaminyltransferase subunit H      
Alternative Name
Phosphatidylinositol-glycan biosynthesis class H protein
Location in the cell
Nuclear   Reliability : 0.865
 

Sequence

CDS
ATGCTAAAATCAGAAACAGTCTTGATCGTTCCAAATGTTGGTATACGCAGCACTCAGAATTATCCAACCAGAAACTTACACACCTTTGTATCATGGGACAGAATTGAAGATATTATTATAAATGAAGTTATTGTGACGTCTAAAGTTCTTTATTACTTGACTATTTTGGTTAAAGAAGATCCTGAGAACACTGGAAACATTGAACAAAATCAATCAACCCGACTGGTGCCTCTTTTTTTGAGGACAAGACCCAGTTTGGCGGTGTTGGAGAAGATTTATGCAGATGTACAAGACTTACTGACGGAGGCTAAGCAACAAGTGTAA
Protein
MLKSETVLIVPNVGIRSTQNYPTRNLHTFVSWDRIEDIIINEVIVTSKVLYYLTILVKEDPENTGNIEQNQSTRLVPLFLRTRPSLAVLEKIYADVQDLLTEAKQQV

Summary

Description
Part of the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.
Catalytic Activity
a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol) + UDP-N-acetyl-alpha-D-glucosamine = a 6-(N-acetyl-alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol + H(+) + UDP
Subunit
Associates with PIGA, PIGC, PIGP, PIGQ and DPM2. The latter is not essential for activity (By similarity).
Similarity
Belongs to the PIGH family.
Keywords
Complete proteome   Cytoplasm   Glycosyltransferase   Reference proteome   Transferase  
Feature
chain  Phosphatidylinositol N-acetylglucosaminyltransferase subunit H
EC Number
2.4.1.198
EMBL
GDQN01010994    JAT80060.1    KQ459604    KPI92372.1    ODYU01008067    SOQ51349.1    + More
RSAL01000001    RVE55343.1    KZ150046    PZC74495.1    KQ460045    KPJ18128.1    NWSH01002167    PCG69005.1    AGBW02009942    OWR49532.1    HAEF01011798    SBR52957.1    HAEB01009751    HAEC01009037    SBQ77253.1    HADZ01014367    HAEA01007840    SBP78308.1    HAEG01001976    SBR66334.1    HADY01011441    HAEJ01001503    SBS41960.1    HAEE01006937    SBR26957.1    HAEH01010132    HAEI01010994    SBS12174.1    HADW01018477    HADX01008105    SBP30337.1    AAQR03134929    GBYX01158480    JAO91174.1    AYCK01008713    CP026262    AWP19834.1    AWP19835.1    AWP19836.1    AWP19837.1    HAED01012781    SBQ99183.1    NHOQ01001000    PWA27820.1    AERX01005496    AK167892    BC086806    GDRN01075575    JAI63039.1    AHAT01019062    AHAT01019063    JH000107    EGV91866.1    AAKN02025210    AAKN02025211    KB743356    EOA99244.1    LZPO01107950    OBS59826.1    ADON01090394    ACTA01105694    ACTA01113694    GL193220    EFB27438.1    MKHE01000012    OWK09240.1    GCES01018533    JAR67790.1    JH173719    GEBF01003757    EHB17638.1    JAN99875.1    KB017142    EPY79727.1    BT079468    ACO13892.1    HAAF01002065    CCP73891.1    AEYP01004105    AEYP01004106    KB105175    ELK32554.1    AABR07064961    CH473947    EDM03717.1    AEMK02000061    DQIR01245654    DQIR01287508    HDC01132.1    HDC42986.1    GBXM01010457    JAH98120.1    CYRY02002172    VCW66832.1    KN123629    KFO24192.1    GAMT01007528    GAMS01004987    GAMR01002640    GAMQ01003428    JAB04333.1    JAB18149.1    JAB31292.1    JAB38423.1    AMGL01104303    AHZZ02032335    AQIA01065284    JH331132    EHH62329.1    JSUE03039944    JSUE03039945    CM001259    EHH27980.1    RAZU01000203    RLQ65891.1    JH882530    ELR49056.1    BC109701    GDIP01145304    JAJ78098.1   
Pfam
PF10181   PIG-H
Interpro
IPR019328   GPI-GlcNAc_Trfase_PIG-H_dom       

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
107
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.14208
Exp number, first 60 AAs:
0.14208
Total prob of N-in:
0.13588
outside
1  -  107
 
 

Population Genetic Test Statistics

Pi
251.701613
Theta
144.644394
Tajima's D
2.322303
CLR
0.101175
CSRT
0.926803659817009
Interpretation
Uncertain
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