SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15256
Pre Gene Modal
BGIBMGA005166
Annotation
PREDICTED:_uncharacterized_protein_LOC101744487_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.231
 

Sequence

CDS
ATGTCTTATTTGAGTGCTTCAGAAAATGTTGGTTTTAGTGGTATTCCACAAAACATATCAGATGCAAGCTGTGCTACACAATATAAAATGGCTGTTGAAGGTGTATCGGGATGTGGCGATGTCAACATGTTTATACATGACAATTCCGGTGATGAACAAACTTACATAACTCCATTTAATGACAATTTCTTTACTAAATTCAAAATAGATCCAAACGAGTTATACACGTTTCATGATACTGATGTTGTTGCTGGTGAGATCACCGTTAGTCATACAGAAGATGCATATATGCTGGATCATGATAAAATCAAGTTAGAGAATCCGAGTAAAGATTTAGAGGTACCAGTAAAATATACAAATGGTGATGTTAAAAAGGAAAAAGAAGAAATTGTCACAAACGGACATTACACACACATCTCCAAGCAGACTGCTACAGATATTAAGACTACAAATACCAAAGCATTGAAAACTAAACAGGTTAAAGAGCCAATACGTAGAGAGTCGACAACTTCAATTAATCAAGGAAGTGGCCCCTGTCAGATTGAAAATGCAACAGCTACAAATGTCTTCAAAAGAGAACAAGGATTGGTTGATAATAAAGTAGTCATTAATAGGGAATCTGTTGCTTCTGTCATTAAAGTACCTACAACACCACCCAAAAAAGCATCTGCAGGAAAGACACATCAATCAAAACAGCGTAAAGGCCGAGGACCAGCTGTTCATGAAGCTTTGCAACGGATATCTATCCAAAACCGTGCTTTGCCTGTACCTTGTGGTACATGGCATGCTCCAGGAGAAATATTGTTTAGCTGTGGACCGCTGGACAGCAAACGTCCTGGGTTCAGGCAGGTTGACACGAGCAGTAGTGATGATGATAATATTCCTGATTATGAATCAGGCGGAGGTCCGGTCTGCGTTGAAGAAACAGCAGCAGAAAGTCGAAGTGCAAGGCTGGCGCTGCGTCGGGCTGCTTTACGGAGGCACGTTGTGAGAGCACATACAGGACTAAAACTAGCCAGAGACTACAGAGATGATAGAGCACTAGCAACATTAATCAAAAAACAGCTGAACAAGCAAGGTCCTTCATATCACTTACCAACACATACAGTTAACCACCTGCTGGCCATGCGAGGTATGCCTGCAGTTCTAACATCGAATGAAAGAAGACGGCTAAGAGAAAGCGGTTGGTCTGGTGGCGAGAGTGGTTCATGGGATGCCACGAAAGCTAAGTGCCTCGAAGAAAAATGCGAGGCGGAACCCTTGCCGTGCGGACGTTATTGTCTAGCGCACGTTACTTTGGCAGCGGAACAGCGCTTGTACGCGGCTTGTGCTGCGGTGTTCGCTGGAGGGGCCCGCTGCAGGCATCCGCTGCTTCCGCTGCACGAACACACGCCACTCTGCGCCGAACACGCTTGGAAACGGGATAACTACGATAAGTTATGTCGCGATACAAGACCGAAGAAGGTTGTGCGCGGTCGAGTGCTGCCGATGACGTCACGGGCTCCGAGACGAGTGAAACGCCGTCGTCGCGTGCCCCTCAAGAACAAACCCCCCGCACCACCGCCCTCAGCCGAACATTCTCTCTCAGAAATCAACGTTTATTCTAACTCATCAAATTACGATAGCTCCGAAGACACCACTATGGGCGCGCTGAGCGAGAATGAGTACATTGCTACAGCGAACAATTCAAATGAACTAGAAGTCGAAGTCGGCACGGTACCGTCTGACGTGTTGTTAGATCCAGCGGTGCTAAGTCAGATCCCTGACGAAGCATTCACGGAGTTTTTTAATCAAGCGGAAGGGTCGTCCTCGTTCGCGGAAAGTTCGGAGCTAGCAGCGGCGCTGGAAGCTGTACTCGACGAGAGAGTATTAGACGAGAGAGCGTTAGATTCAATCACCGACTGTGTTTTCACGCCCCAAACAGAAACGAAGGACAAAATACAAGTACCGTCTTCGATGCCGTCGAGCGCACCGTCATAA
Protein
MSYLSASENVGFSGIPQNISDASCATQYKMAVEGVSGCGDVNMFIHDNSGDEQTYITPFNDNFFTKFKIDPNELYTFHDTDVVAGEITVSHTEDAYMLDHDKIKLENPSKDLEVPVKYTNGDVKKEKEEIVTNGHYTHISKQTATDIKTTNTKALKTKQVKEPIRRESTTSINQGSGPCQIENATATNVFKREQGLVDNKVVINRESVASVIKVPTTPPKKASAGKTHQSKQRKGRGPAVHEALQRISIQNRALPVPCGTWHAPGEILFSCGPLDSKRPGFRQVDTSSSDDDNIPDYESGGGPVCVEETAAESRSARLALRRAALRRHVVRAHTGLKLARDYRDDRALATLIKKQLNKQGPSYHLPTHTVNHLLAMRGMPAVLTSNERRRLRESGWSGGESGSWDATKAKCLEEKCEAEPLPCGRYCLAHVTLAAEQRLYAACAAVFAGGARCRHPLLPLHEHTPLCAEHAWKRDNYDKLCRDTRPKKVVRGRVLPMTSRAPRRVKRRRRVPLKNKPPAPPPSAEHSLSEINVYSNSSNYDSSEDTTMGALSENEYIATANNSNELEVEVGTVPSDVLLDPAVLSQIPDEAFTEFFNQAEGSSSFAESSELAAALEAVLDERVLDERALDSITDCVFTPQTETKDKIQVPSSMPSSAPS

Summary

Pfam
PF13891   zf-C3Hc3H
Interpro
IPR025927   Potential_DNA-bd       

Ontologies

Topology

Length:
659
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0002
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00021
outside
1  -  659
 
 

Population Genetic Test Statistics

Pi
289.175221
Theta
188.094709
Tajima's D
1.647197
CLR
0.150027
CSRT
0.819009049547523
Interpretation
Uncertain
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