SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15252
Annotation
PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.897
 

Sequence

CDS
ATGCAAAGGCAAAGGGGGGAGAGTGAAGCGCTCGTAGCAGCACTTTCAGTGGTAGTGTTCTATGTTTCTGCTGTATACCCTTACACCGGCACCGGCCCATTGTGGAACAAAGCAATCGCTGCTGAAACAGAAGCATGCCGTAAGAACTGGTGGCTTAATCTACTCATGATCAGCAATTATGTTGACACCGAAAATATTTGCATCGTAATATCCTGGTACATTCCGTGCGACTTCCACTTTTTCTTGGTCACAATTATTGGATTTTTTTTATACAAGAAGTACCCGAAAATAGGCGTTATCACCGGAGGAGTATTGTTTGTGGTCGCACTATTGATACCGGGCATCATGACGTACATGTACCAGTTGGCTGCAGTACAACTGTTTACTATTGAGTGA
Protein
MQRQRGESEALVAALSVVVFYVSAVYPYTGTGPLWNKAIAAETEACRKNWWLNLLMISNYVDTENICIVISWYIPCDFHFFLVTIIGFFLYKKYPKIGVITGGVLFVVALLIPGIMTYMYQLAAVQLFTIE

Summary

EMBL
BABH01019947    BABH01019948    BABH01019949    BABH01019950    NWSH01004589    PCG64888.1    + More
KZ150046    PZC74500.1    JTDY01000928    KOB75402.1    KQ460045    KPJ18134.1    ODYU01002228    SOQ39435.1    RSAL01000102    RVE47464.1    AGBW02010872    OWR47594.1    KQ459054    KPJ03927.1    NWSH01001289    PCG71838.1    KB632326    ERL92431.1    APGK01035013    APGK01035014    APGK01035015    KB740923    ENN78145.1    GECU01009231    JAS98475.1    GDQN01011399    GDQN01004801    JAT79655.1    JAT86253.1    ODYU01005850    SOQ47141.1    GDQN01001866    JAT89188.1    KQ971354    EFA06959.1    GDQN01006834    JAT84220.1    GDQN01000299    JAT90755.1    KQ460047    KPJ17986.1    GDQN01007466    JAT83588.1    GDQN01004215    JAT86839.1    GEBQ01030520    JAT09457.1    APGK01035017    APGK01035018    APGK01035019    APGK01035020    ENN78147.1    GEBQ01014418    JAT25559.1    GFXV01007717    MBW19522.1    GECU01029990    GECU01001596    JAS77716.1    JAT06111.1    GGMS01000820    MBY70023.1    NEVH01012096    PNF30393.1    PNF30392.1    PCG71839.1    APGK01049501    APGK01049502    KB741155    ENN73651.1    KB630423    KB631761    ERL83595.1    ERL85915.1    GGMS01007461    MBY76664.1    GEDC01021708    JAS15590.1    KPJ17987.1    GFJQ02003514    JAW03456.1    ABLF02032424    ABLF02032427    GGMS01002340    MBY71543.1    GEZM01042633    JAV79751.1    NEVH01017478    PNF24171.1    GGMS01004866    MBY74069.1    ODYU01006284    SOQ47989.1    GGMR01006421    MBY19040.1    ABLF02037491    ABLF02037494    ABLF02037498    ABLF02037500    ABLF02037506    KQ972879    KXZ75738.1    BABH01041997    NWSH01000450    PCG76333.1    GFXV01007317    MBW19122.1    RSAL01000275    RVE43113.1    GGMR01011802    MBY24421.1    ADMH02000427    ETN66544.1    ODYU01006653    SOQ48684.1    ABLF02004907    ABLF02004908    ABLF02004909    ABLF02004910    ABLF02031628    ABLF02031630    PYGN01001466    PSN34669.1    KK107213    EZA55272.1    GGMS01005383    MBY74586.1    GGMS01010891    MBY80094.1    GEDV01006712    JAP81845.1    GGMS01009213    MBY78416.1    NNAY01000028    OXU31810.1    GGMR01009762    MBY22381.1    ATLV01019615    KE525275    KFB44409.1    GGFL01005669    MBW69847.1    NEVH01014836    PNF27544.1    APCN01000146    ABLF02022069    KK112404    KFM57567.1    AXCM01001275    GEBQ01025424    JAT14553.1   
Pfam
PF01757   Acyl_transf_3        + More
PF00497   SBP_bac_3
Interpro
IPR006621   Nose-resist-to-fluoxetine_N        + More
IPR002656   Acyl_transf_3       
IPR001638   Solute-binding_3/MltF_N       

Ontologies

Topology

Length:
131
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
66.47869
Exp number, first 60 AAs:
20.73412
Total prob of N-in:
0.99505
POSSIBLE N-term signal
sequence
inside
1  -  12
TMhelix
13  -  35
outside
36  -  67
TMhelix
68  -  90
inside
91  -  96
TMhelix
97  -  119
outside
120  -  131
 
 

Population Genetic Test Statistics

Pi
152.825807
Theta
157.905593
Tajima's D
-0.333816
CLR
46.564886
CSRT
0.286335683215839
Interpretation
Uncertain
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