Silkworm Genome Informatics Database

Gene

KWMTBOMO15249

Pre Gene Modal

BGIBMGA005016

Annotation

PREDICTED:_zinc_finger_protein_774-like_[Bombyx_mori]

Location

Bomo_Chr25(+):7436966-7446322 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.169

CDS

ATGAACATGGAGGCAGCATTACCACATTTCCATCGACTCAACAGCTCCAGATTGTATCAGTATGCTTCTCCTCCTCTCAGAATATCCAACAGTTACCTCCACGATATCATTCCTCCTCAACATCCCAATTTACTCCAGCAATATCTGGCCTACTACAATGAACCAGTTGTGCCTCTCGATCTTTCTCTAAAATCCAGCACACCGATCACCCCACCATGCACCCCTCCACTAGCACAAAAAAGAAAACCTGACGAAATAAAAAACAAATCTCCCAAATTATTGAGACACTTCGAAGACAATGACACCAAAGAGGCGGATAAAAAATCAGAAAAATGGAAGATTGACGATGAAATCTCAAACGATAGTGACAGTCCGGAAGCAAAGAAACTTAAATTCACGAAGAAATTTTTTGATGAACTACAAACCTGTTTACCAAAGGAACCTGAGACACCTTCGAAAAGCGAAAGAGGGTCGCCAGACGTAGTTGAAGTCAAAGATGTGGAAGAAAGACCGAAAAAATCTCCTAAACCACTCCAAGGACCGTTGAAGAAGAGTAAAGTTGTAAGGCGTTTGATGTTCGATGAGGACAAAACTTCACCTGTGTCTGGAACAATAATACGAGATCTAGCCGAAGACGAAACATTAGTGGTTAGAAAGGGCGATATAGATCCGGCCTTTAATGTGGTCGAAGTTACAGATGAAGCCAAAGCTCTGATAGCGAGCATTGAGAATCGACTGGGGCAGTACATCTGTAGATTGTGCCGGCGATTATACGGGGACGCATTTGCTCTGGCACAGCACAGGTGCTCACGCATAGTTCACATCGAATATCGATGCCCTGAATGCGACAAGGTTTTCAACTGTCCAGCTAACCTAGCCTCCCATCGTCGCTGGCACAAGCCACGCGTGCCGGGGACCACTAAGCGACGAGACCCTCCTTCAACCGACGCTGGCCGGTTCTCGTGTCAGCGATGCGGCAAGCTGTTCCGCAGACAGGCTTATCTCAGGAAGCACTTGTTGGCACACGAGCATCCGGAAAATGAAACCGAAAAAGAGCCTTCAGCTTTCCGACAAGTCCATTCGGAATACAACGCATATCAACAAGAGACAATCAGAGATGCGAACTTCAATGCATTCTGGAACAAGATTCCCCCTCCGCAACATGAGTTGAATTGGGAAGGGTTGCGCACGCGCTGTGCGTCGTCCTGCTCGTCTGAAGACTCACGCAGCCTGGACGTGACGGGATCTGAAGACGAAGGCGGCGGGGCTATAGAAGGCTGA

Protein

MNMEAALPHFHRLNSSRLYQYASPPLRISNSYLHDIIPPQHPNLLQQYLAYYNEPVVPLDLSLKSSTPITPPCTPPLAQKRKPDEIKNKSPKLLRHFEDNDTKEADKKSEKWKIDDEISNDSDSPEAKKLKFTKKFFDELQTCLPKEPETPSKSERGSPDVVEVKDVEERPKKSPKPLQGPLKKSKVVRRLMFDEDKTSPVSGTIIRDLAEDETLVVRKGDIDPAFNVVEVTDEAKALIASIENRLGQYICRLCRRLYGDAFALAQHRCSRIVHIEYRCPECDKVFNCPANLASHRRWHKPRVPGTTKRRDPPSTDAGRFSCQRCGKLFRRQAYLRKHLLAHEHPENETEKEPSAFRQVHSEYNAYQQETIRDANFNAFWNKIPPPQHELNWEGLRTRCASSCSSEDSRSLDVTGSEDEGGGAIEG

Uniprot

H9J675 A0A2A4IY51 A0A2H1V4Y0 A0A194RLE1 A0A194PMM0 A0A212F1H8 + More
A0A226DBZ7

Pubmed

19121390 26354079 22118469

EMBL

BABH01019955 NWSH01004589 PCG64887.1 ODYU01000693 SOQ35893.1 KQ460045 + More
KPJ18135.1 KQ459604 KPI92365.1 AGBW02010872 OWR47595.1 LNIX01000025 OXA42703.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000007151 UP000198287 + More

PRIDE

H9J675

Pfam

PF00096 zf-C2H2

Interpro

IPR013087 Znf_C2H2_type + More
IPR036236 Znf_C2H2_sf

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9J675 A0A2A4IY51 A0A2H1V4Y0 A0A194RLE1 A0A194PMM0 A0A212F1H8 + More
A0A226DBZ7

PDB

3ZMS E-value=2.40851e-29, Score=321

KEGG

101744918 no KO assigned | (RefSeq) zinc finger protein 774-like

GO

GO:0003676 GO:0046872 GO:0050660 GO:0050661 GO:0005524 GO:0016020 GO:0003677 GO:0008408 GO:0005112 GO:0015930

Length:

426

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00160

outside

1 - 426

Pi

247.106823

Theta

200.395618

Tajima's D

0.130403

CLR

1.033885

CSRT

0.408879556022199

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics