Silkworm Genome Informatics Database

Gene

KWMTBOMO15230 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005171

Annotation

PREDICTED:_protein_FAM161A-like_[Bombyx_mori]

Location

Bomo_Chr25(-):7169732-7170783 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.156

CDS

ATGCCAAAAACTGAATACGAACGAACGGGTAGTTTAACCGAGCAATGTTCGATTGATTCTATGTCGAGTTGTTCTTTAGCTGCCGCTGATTTGGATGCTATTAAATTGAAGGAGTTTTATCGTAATATACCAGACTACAAAGACATCAACCATTTACCTACCGAAGAATTCTACCTGACTTTAAAATCTTTACGTGAAAAAAAGAAAATAATGTTGGATTTGGCAATGGAACACATCGACGATTGCACTAGTAACCGCGTGAGAAATAATAACGTGTTGAATAGAAAATGCTGCTCAAAATCAAAATATGACGACATTACTGGGAGAAAATATTGTAATAGGAATGAAAACATAAAATTTGTCAATCCTTCACCCAAACAATCTAAAAAATCAGTAATACAAAACAATGAAAATATACAACGATCTTGCAAAAAAGCAACAATTATGAATGATGCATCAAAAACAACATTTAGAGATGACTTAAGAAATTCGCAGGCTGATCATAACAAAGAACAACCGAAAAGAAATTATTCTGCATGTTCTATATCTTGGAACGTTGCCGATCTTGAGAAGAAAGACGAAATTGATGAAAAATTCGAACAGTATTTTGATAAAAAGAAGTATAATGTAGCCAAAGTGGATATTGATGATCCAAACGAATTTAAAGCCCAAAGCATGCCTTCTAGTCCGTTGAGAAGCAAAAGAGTTACATCTCCTTTAAGAAAGCGGAAAAGCATTACAGTCCCTAAGCCATTTAAAATGACTGAAAGGTATGTGAAGATAAACTTCCAGGAGAAAATAATTTTAAAGCTAAAAAGGAACCGAAAAAAGCTATTATCTGAGATAGAACTAGTCTTGCCATACGTAGATATTGTTACAAAGAAAAATCGTTTTCTTTTACTCTCACATAAAACATTTATAGTTACTTTGTGTGTACCTATACCTATTTGGATTTAA

Protein

MPKTEYERTGSLTEQCSIDSMSSCSLAAADLDAIKLKEFYRNIPDYKDINHLPTEEFYLTLKSLREKKKIMLDLAMEHIDDCTSNRVRNNNVLNRKCCSKSKYDDITGRKYCNRNENIKFVNPSPKQSKKSVIQNNENIQRSCKKATIMNDASKTTFRDDLRNSQADHNKEQPKRNYSACSISWNVADLEKKDEIDEKFEQYFDKKKYNVAKVDIDDPNEFKAQSMPSSPLRSKRVTSPLRKRKSITVPKPFKMTERYVKINFQEKIILKLKRNRKKLLSEIELVLPYVDIVTKKNRFLLLSHKTFIVTLCVPIPIWI

Uniprot

H9J6M9 A0A2A4J074 A0A2W1BJH2 A0A2H1VL71 A0A212FF08 A0A0L7KR80 + More
A0A194PHZ8 A0A194RKT1 B0W6M2 A0A182T473 A0A1W4WQQ1 A0A182GJW6 A0A182M2X4 Q16JL2 A0A182GIH8

Pubmed

19121390 28756777 22118469 26227816 26354079 26483478 + More
17510324

EMBL

BABH01019985 BABH01019986 NWSH01004460 PCG65078.1 KZ150014 PZC75018.1 + More
ODYU01003165 SOQ41567.1 AGBW02008891 OWR52287.1 JTDY01006890 KOB65610.1 KQ459604 KPI92349.1 KQ460045 KPJ18147.1 DS231848 EDS36696.1 JXUM01013036 JXUM01013037 KQ560367 KXJ82776.1 AXCM01000558 CH478003 EAT34472.1 JXUM01066109 KQ562381 KXJ76037.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000037510 UP000053268 UP000053240 + More
UP000002320 UP000075901 UP000192223 UP000069940 UP000249989 UP000075883 UP000008820

PRIDE

H9J6M9

Pfam

PF10595 UPF0564

Interpro

IPR019579 UPF0564

ProteinModelPortal

H9J6M9 A0A2A4J074 A0A2W1BJH2 A0A2H1VL71 A0A212FF08 A0A0L7KR80 + More
A0A194PHZ8 A0A194RKT1 B0W6M2 A0A182T473 A0A1W4WQQ1 A0A182GJW6 A0A182M2X4 Q16JL2 A0A182GIH8

KEGG

105841401 K16772 protein FAM161A | (RefSeq) protein FAM161A-like

GO

Length:

318

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.40567

Exp number, first 60 AAs:

0.00017

Total prob of N-in:

0.20865

outside

1 - 318

Pi

217.400535

Theta

167.157883

Tajima's D

0.855111

CLR

0

CSRT

0.619019049047548

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics