Gene

KWMTBOMO15214

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr25(-):6944163-6945093      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.628

CDS

ATGGGGTTAAGCAGAACCACGGTGAAAAGGGTGTTAAATGAAGACTTAGGGCTTCGGGCATATCGAAGAAAAACAGGACATCGTTTGAATGCTCGTCTAATGGACCTGAGACTGAAGAGATGCCGCGCTTTGTTGAAGCGGTACGCGGGAAAAAAATTTCGGCAAATTCTTTTTTCGGATGAAAAAAATTTTACCGTAGAAGAGAGCTACAACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAGGGTGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCGTAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAGGCAACACTTGGAAGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAA

Protein

MGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKFRQILFSDEKNFTVEESYNKQNDKVYAHSSEEASNRIPRVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPARRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQATLGRKGVLKASSQFGVTQDILD

Similarity

Belongs to the TGF-beta family.

Uniprot

Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   B9A8E5   A0A0N0PF55   + More
A0A3S2LTJ6   A0A3S2M6Z0   G3G3K1   A0A3S2LWW4   P90693   A0A3S2P5Q6   A0A3S2LXK8   A0A3S2NF68   A0A3S2M6X4   A0A3S2P4S1   A0A3S2PAI6   A0A226D9B6   A0A1I7RU52   A0A1I7SJQ8   A0A1I7SRX5   W6NUW0   A0A016VJ32   A0A368H7I1   A0A368FVD9   A0A016WN34   H3E1D2   A0A2H1W6Q6   H3ETI8   H3EXA9   H3E4E9   A0A0N4XXA5   H3EE07   A0A1I8CC25   A0A016WY15   H3DS69   A0A016TV39   H3FLR7   A0A0C2DAI6   A0A016SXC9   E3N6E8   A0A016S9F8   H3ESY7   E3NJL6   A0A016TQ99   A0A2G5T9N6   E3MXK7   A0A016WKB6   H3FF09   A0A0K9NHE3   E3M897   H3DZR2   E3NHK7   E3N1H1   E3N9D7   E3M1J2   A0A183G443   A0A3P8B6H1   A0A2G5TN79   A0A183FUJ2   A0A3P8A0U6   A0A1L5BY18   E3N749   H3FES1   A0A2M4DSA6   E3NHD7   E3N4H8   A0A2G5SF52   E3MQK2   A0A2G5SZY0   A0A1I7Z1I3   T1PDL9   A0A016W3L5   A0A1I7XN71   A0A2G5VPS7   A0A0N5BKM5   A0A2G5TC57   A0A2H2I0K4   A0A016WYI6   A0A0N4XTP7  

Pubmed

12653938    26354079    9014339    21909270    25730766    18806794    + More
26829753    26814964    25527032    26392177    23874975   

EMBL

AF461149    AAN06610.1    AB363028    BAG15927.1    AB363006    AB363010    + More
AB363014    BAG15923.1    BAG15924.1    AB363018    BAG15926.1    AB473770    BAH20555.1    KQ459680    KPJ20472.1    RSAL01000012    RVE53510.1    RSAL01000021    RVE52408.1    JF779677    AEO90418.1    RSAL01000140    RVE46091.1    U47917    AAB47739.1    RSAL01000016    RVE53060.1    RSAL01000133    RVE46339.1    RSAL01000063    RVE49524.1    RSAL01000022    RVE52367.1    RSAL01000431    RVE41742.1    RSAL01000144    RVE45972.1    LNIX01000030    OXA41211.1    CAVP010059404    CDL95787.1    JARK01001345    EYC27589.1    JOJR01000015    RCN51257.1    JOJR01000583    RCN36166.1    JARK01000176    EYC41234.1    ODYU01006378    SOQ48174.1    UYSL01019905    VDL71189.1    JARK01000059    EYC44525.1    JARK01001411    EYC06502.1    KN726990    KIH66733.1    JARK01001499    EYB95145.1    DS268539    EFO88027.1    JARK01001601    EYB87313.1    DS268747    EFP00909.1    JARK01001421    EYC04911.1    PDUG01000005    PIC23776.1    DS268492    EFP11689.1    JARK01000255    EYC39473.1    LFYR01002220    KMZ56176.1    DS268428    EFO94379.1    DS268679    EFO98285.1    DS268508    EFO83264.1    DS268565    EFO90304.1    DS268421    EFO88618.1    UZAH01029309    VDP05368.1    PIC28734.1    UZAH01027257    VDO90094.1    KX931010    APL98300.1    DS268545    EFO88382.1    GGFL01016214    MBW80392.1    DS268673    EFO98001.1    DS268525    EFO85497.1    PDUG01000012    PIC13506.1    DS268466    EFP06959.1    PDUG01000006    PIC20538.1    KA646003    AFP60632.1    JARK01001337    EYC34439.1    PDUG01000001    PIC53815.1    PIC24955.1    JARK01000073    EYC44053.1    UYSL01019770    VDL69590.1   

Proteomes

UP000053240    UP000283053    UP000198287    UP000095284    UP000025227    UP000024635    + More
UP000252519    UP000005239    UP000038043    UP000271162    UP000095286    UP000008281    UP000230233    UP000036987    UP000050761    UP000095287    UP000095283    UP000046392    UP000005237   

PRIDE

Q8ITJ9    B1Q3L9    B1Q3L5    B1Q3L8    P90693   

Pfam

PF13358   DDE_3        + More
PF00019   TGF_beta
PF16095   COR
PF00069   Pkinase
PF00078   RVT_1
PF00292   PAX
PF10320   7TM_GPCR_Srsx
PF13936   HTH_38

Interpro

IPR009057   Homeobox-like_sf        + More
IPR038717   Tc1-like_DDE_dom       
IPR001839   TGF-b_C       
IPR029034   Cystine-knot_cytokine       
IPR017948   TGFb_CS       
IPR015615   TGF-beta-rel       
IPR032171   COR       
IPR020859   ROC_dom       
IPR000719   Prot_kinase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR027417   P-loop_NTPase       
IPR000477   RT_dom       
IPR036388   WH-like_DNA-bd_sf       
IPR001523   Paired_dom       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR019424   7TM_GPCR_Srsx       
IPR025246   IS30-like_HTH       
IPR036906   ATPase_V1_fsu_sf       

SUPFAM

SSF46689   SSF46689        + More
SSF57501   SSF57501       
SSF56112   SSF56112       
SSF52540   SSF52540       
SSF50998   SSF50998       

Gene 3D

2.10.90.10     1.10.10.10     3.40.50.10580    

ProteinModelPortal

Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   B9A8E5   A0A0N0PF55   + More
A0A3S2LTJ6   A0A3S2M6Z0   G3G3K1   A0A3S2LWW4   P90693   A0A3S2P5Q6   A0A3S2LXK8   A0A3S2NF68   A0A3S2M6X4   A0A3S2P4S1   A0A3S2PAI6   A0A226D9B6   A0A1I7RU52   A0A1I7SJQ8   A0A1I7SRX5   W6NUW0   A0A016VJ32   A0A368H7I1   A0A368FVD9   A0A016WN34   H3E1D2   A0A2H1W6Q6   H3ETI8   H3EXA9   H3E4E9   A0A0N4XXA5   H3EE07   A0A1I8CC25   A0A016WY15   H3DS69   A0A016TV39   H3FLR7   A0A0C2DAI6   A0A016SXC9   E3N6E8   A0A016S9F8   H3ESY7   E3NJL6   A0A016TQ99   A0A2G5T9N6   E3MXK7   A0A016WKB6   H3FF09   A0A0K9NHE3   E3M897   H3DZR2   E3NHK7   E3N1H1   E3N9D7   E3M1J2   A0A183G443   A0A3P8B6H1   A0A2G5TN79   A0A183FUJ2   A0A3P8A0U6   A0A1L5BY18   E3N749   H3FES1   A0A2M4DSA6   E3NHD7   E3N4H8   A0A2G5SF52   E3MQK2   A0A2G5SZY0   A0A1I7Z1I3   T1PDL9   A0A016W3L5   A0A1I7XN71   A0A2G5VPS7   A0A0N5BKM5   A0A2G5TC57   A0A2H2I0K4   A0A016WYI6   A0A0N4XTP7  

PDB

5CR4     E-value=7.67643e-07,     Score=124

KEGG

102466045    no KO assigned | (RefSeq) Mir2780a-3, bmo-mir-2780a-3; microRNA 2780a-3

GO

GO:0003677   GO:0005576   GO:0008083   GO:0006355   GO:0016021   GO:0004930   GO:0004519   GO:0034220  

PANTHER

PTHR11848  

Subcellular location

Secreted  

Length:

222

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.40101

Exp number, first 60 AAs:

0

Total prob of N-in:

0.20175

outside

1  -  222

 

 

Pi

193.477997

Theta

82.784024

Tajima's D

4.185607

CLR

2.764151

CSRT

0.999200039998

Interpretation

Uncertain