Gene

KWMTBOMO15212

Annotation

PREDICTED:_zinc_finger_protein_879-like_[Amyelois_transitella]

Location

Bomo_Chr25(+):6832699-6841703      View in EpiBrowser

Full name

Zinc finger and SCAN domain-containing protein 12       + More
Zinc finger protein      

Alternative Name

Zinc finger protein 305
Zinc finger protein 96

Transcription factor

zf-C2H2

Location in the cell

Extracellular   Reliability : 1.239 Nuclear   Reliability : 1.874

CDS

ATGAGCTCTGGTTATGCCGTTCTTGTTCAGGGCTACCCCTGTCGAGTTTGCGGACGTCGCTTCAATCAGTCCGGTCATCTCGCTATACACATGAGGATGCACACTGGAGAACGACCCTACCCCTGCGATCTTTGCCCGAAAGCTTTCAAAGTAAAGGTGGAGCGCGACGATCACCGTCGGACGCACACCGGGGAGCGTCCCTTCGCGTGCGCCGCCTGCCACAAGACGTTCACCGCCGCGGCACGGTTGCGTGAACACGCACGCATCCACACCGATCAAAGGCCGTACCGTTGCGACATATGCGGAGCAGCGTTCAGAAGACCTTATGCAAGAACTGTGCACACTCTGATACACACAGGAGAAAAGCCACATGAATGCGATGTCTGCGGAACCGCTTTCAGGTAA

Protein

MSSGYAVLVQGYPCRVCGRRFNQSGHLAIHMRMHTGERPYPCDLCPKAFKVKVERDDHRRTHTGERPFACAACHKTFTAAARLREHARIHTDQRPYRCDICGAAFRRPYARTVHTLIHTGEKPHECDVCGTAFR

Similarity

Belongs to the krueppel C2H2-type zinc-finger protein family.

Keywords

Complete proteome   DNA-binding   Isopeptide bond   Metal-binding   Nucleus   Reference proteome   Repeat   Transcription   Transcription regulation   Ubl conjugation   Zinc   Zinc-finger  

Feature

chain  Zinc finger and SCAN domain-containing protein 12

Uniprot

A0A2H1VF20   A0A2A4K3G3   A0A194RL66   A0A194PH05   A0A212FIM1   A0A0L8FH52   + More
A0A3Q3WE31   A0A0L8G9N0   A0A0L8HN13   K1PPH7   A0A0L8H367   A0A0L8GR84   A0A0L8FGG8   A0A0L8FGD4   H2YRM7   X1XP18   A0A0L8G597   A0A0L8FGG5   A0A0L8I2I5   J9JRV9   A0A0L8I4F9   A0A0L8H1D1   A0A024RCI2   O43309   A0A1S3GSY6   A8K187   A0A2J8NWS9   A1YEP8   A0A0L8HC12   A1YFW2   A0A2R9BGT1   A2T6V8   A0A2I2YPJ7   A0A0L8I4T4   A0A0L8FGL4   K7A5W6   A0A2R9BE62   J9K1Q2   J9M6Z4   A0A2R9BCV9   A0A0L8HST0   A0A1S3R1I8   A0A3Q3W5N6   A0A0L8I358   A0A0L8H334   A0A0L8GGW1   A0A0L8I550   A0A0L8FUX0   A0A0L8GC27   A0A0L8G8M6   A0A2Y9FHH7   A0A2Y9MA18   A0A2Y9M7Y2   A0A1U7U9M6   A0A2U3V1H9   A0A0L8H353   H0XW48   F1S1R6   A0A0L8I982   A0A0L8I9F2   A0A0L8FUW8   J9K4V2   A0A3P9D5R2   A0A0L8FS27   A0A1S3QGN7   L8I2L8   A0A067QQP6   A0A2K5PAF2   A0A1S3QF73   A0A2K5CZV2   A0A1A8RBF6   A0A0L8H890   A0A0L8HFR9   A0A0L8HUF1   A0A2K5CZY2   A0A0L8HCT6   A0A1S3NAM6   A0A0L8G9I1   A2T7F4   A0A0L8I5S5   F7HGS0   A0A0L8I9I5   A0A0L8H224   G1QX74   A0A2K6M0R4   A0A2K6RW34   A0A0L8HF83   A0A0D9R6R0   A0A2K5YHV6   H9G2E9   A0A2K6M0R2   G7P3T1   A0A2K6RW41   A0A0L8H2K6   A0A2K6EBN5   A0A2K5N265   G7MRB3   A0A2I3HKR0   H2PIA8  

EC Number

2.1.1.-

Pubmed

26354079    22118469    22992520    11181995    9455477    14574404    + More
15489334    28112733    16136131    22722832    25186727    22751099    24845553    17431167    25362486    25319552    22002653   

EMBL

ODYU01002195    SOQ39371.1    NWSH01000170    PCG78795.1    KQ460045    KPJ18164.1    + More
KQ459604    KPI92328.1    AGBW02008360    OWR53578.1    KQ432511    KOF62736.1    KQ423101    KOF73579.1    KQ417725    KOF90597.1    JH816467    EKC18365.1    KQ419549    KOF83205.1    KQ420787    KOF79339.1    KOF62737.1    KOF62735.1    ABLF02024899    KQ423998    KOF71750.1    KOF62732.1    KQ416694    KOF95702.1    ABLF02009506    KQ416583    KOF96367.1    KQ419593    KOF82997.1    CH471081    EAX03162.1    AB007886    Z98745    BC041661    AK289802    BAF82491.1    AACZ04022771    NBAG03000221    PNI76229.1    PNI76230.1    DQ976435    KQ418552    KOF86858.1    DQ977163    AJFE02104323    DQ977314    CABD030043963    KQ416547    KOF96492.1    KQ433045    KOF62551.1    GABC01008280    JAA03058.1    ABLF02021752    ABLF02055611    ABLF02025458    KQ417370    KOF92264.1    KQ416656    KOF95953.1    KQ419395    KOF83678.1    KQ421858    KOF76183.1    KOF96489.1    KQ426253    KOF68496.1    KQ422600    KOF74581.1    KQ423235    KOF73223.1    KOF83721.1    AAQR03175424    AAQR03175425    AAQR03175426    AAQR03175427    AEMK02000052    KQ416225    KOF98046.1    KOF98049.1    KOF68497.1    ABLF02014787    KQ427054    KOF67463.1    JH882415    ELR49527.1    KK853519    KDR07021.1    HAEH01015736    SBS03405.1    KQ418900    KOF85422.1    KQ418295    KOF87969.1    KQ417280    KOF92817.1    KQ418493    KOF87113.1    KQ423122    KOF73534.1    DQ977463    KQ416504    KOF96709.1    JSUE03030489    KQ416209    KOF98141.1    KQ419523    KOF83316.1    ADFV01069097    ADFV01069098    KQ418303    KOF87857.1    AQIB01159633    AQIB01159634    JU337307    JU470742    AFE81058.1    AFH27546.1    CM001279    EHH52845.1    KOF83000.1    CM001256    EHH18086.1    ABGA01095014    ABGA01095015   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000053454    UP000261620    + More
UP000005408    UP000007875    UP000007819    UP000005640    UP000081671    UP000002277    UP000001519    UP000240080    UP000087266    UP000248484    UP000248483    UP000189704    UP000245320    UP000005225    UP000008227    UP000265160    UP000027135    UP000233040    UP000233020    UP000006718    UP000001073    UP000233180    UP000233200    UP000029965    UP000233140    UP000009130    UP000233120    UP000233060    UP000001595   

PRIDE

O43309    A8K187    F1S1R6   

Pfam

PF00096   zf-C2H2        + More
PF00856   SET
PF02023   SCAN
PF01352   KRAB
PF00240   ubiquitin
PF07776   zf-AD

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR001214   SET_dom       
IPR017114   YY-1-like       
IPR003656   Znf_BED       
IPR017921   Znf_CTCHY       
IPR039705   REPIN1       
IPR038269   SCAN_sf       
IPR003309   SCAN_dom       
IPR017125   Znf_PRDM5-like       
IPR001909   KRAB       
IPR036051   KRAB_dom_sf       
IPR038441   THAP_Znf_sf       
IPR000626   Ubiquitin_dom       
IPR012934   Znf_AD       
IPR029071   Ubiquitin-like_domsf       
IPR006612   THAP_Znf       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       
SSF54236   SSF54236       

Gene 3D

1.10.4020.10     3.30.40.180    

CDD

cd07936  SCAN
cd07765  KRAB_A-box

ProteinModelPortal

A0A2H1VF20   A0A2A4K3G3   A0A194RL66   A0A194PH05   A0A212FIM1   A0A0L8FH52   + More
A0A3Q3WE31   A0A0L8G9N0   A0A0L8HN13   K1PPH7   A0A0L8H367   A0A0L8GR84   A0A0L8FGG8   A0A0L8FGD4   H2YRM7   X1XP18   A0A0L8G597   A0A0L8FGG5   A0A0L8I2I5   J9JRV9   A0A0L8I4F9   A0A0L8H1D1   A0A024RCI2   O43309   A0A1S3GSY6   A8K187   A0A2J8NWS9   A1YEP8   A0A0L8HC12   A1YFW2   A0A2R9BGT1   A2T6V8   A0A2I2YPJ7   A0A0L8I4T4   A0A0L8FGL4   K7A5W6   A0A2R9BE62   J9K1Q2   J9M6Z4   A0A2R9BCV9   A0A0L8HST0   A0A1S3R1I8   A0A3Q3W5N6   A0A0L8I358   A0A0L8H334   A0A0L8GGW1   A0A0L8I550   A0A0L8FUX0   A0A0L8GC27   A0A0L8G8M6   A0A2Y9FHH7   A0A2Y9MA18   A0A2Y9M7Y2   A0A1U7U9M6   A0A2U3V1H9   A0A0L8H353   H0XW48   F1S1R6   A0A0L8I982   A0A0L8I9F2   A0A0L8FUW8   J9K4V2   A0A3P9D5R2   A0A0L8FS27   A0A1S3QGN7   L8I2L8   A0A067QQP6   A0A2K5PAF2   A0A1S3QF73   A0A2K5CZV2   A0A1A8RBF6   A0A0L8H890   A0A0L8HFR9   A0A0L8HUF1   A0A2K5CZY2   A0A0L8HCT6   A0A1S3NAM6   A0A0L8G9I1   A2T7F4   A0A0L8I5S5   F7HGS0   A0A0L8I9I5   A0A0L8H224   G1QX74   A0A2K6M0R4   A0A2K6RW34   A0A0L8HF83   A0A0D9R6R0   A0A2K5YHV6   H9G2E9   A0A2K6M0R2   G7P3T1   A0A2K6RW41   A0A0L8H2K6   A0A2K6EBN5   A0A2K5N265   G7MRB3   A0A2I3HKR0   H2PIA8  

PDB

2I13     E-value=8.11082e-25,     Score=275

KEGG

101743215    no KO assigned | (RefSeq) zinc finger protein 28-like

GO

GO:0003676   GO:0008168   GO:0003677   GO:0003700   GO:0046872   GO:0005634   GO:0000981   GO:0000976   GO:0006355   GO:0008270   GO:0016020   GO:0004888   GO:0007166   GO:0008408   GO:0005112   GO:0015930  

PANTHER

PTHR24406:SF10  

Subcellular location

Nucleus  

Length:

134

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00078

Exp number, first 60 AAs:

0.00063

Total prob of N-in:

0.11877

outside

1  -  134

 

 

Pi

22.869867

Theta

17.357528

Tajima's D

1.813179

CLR

0.817741

CSRT

0.855157242137893

Interpretation

Uncertain