SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15211
Pre Gene Modal
BGIBMGA004953
Annotation
PREDICTED:_zinc_finger_protein_26-like_isoform_X2_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 1.627 Nuclear   Reliability : 2.189
 

Sequence

CDS
ATGATGTTCGATCCACCGGACTATCCCTATAAAGAACTAGCTGAAGTTTATGAGACCCAGAGTCTCTTATTTAGTGGCAATAACGAGACTAAAACCTTAGAAGCGCCATCTATCGATACCACAGATAATCAACTAACTTTAGAATCGAATGTTAGCGGGCAATACTTTAACGTTGAAAGTATATTGGTCCGAGAATCAGAAAATTTAATGGAACAAGCTACAGAATGTTATGTTGTCCAAGATGATAATTTATTTAATTTCGAATCAACTTTACTTGACGAAAACACTGTTAACCAATTTCTTTTACCAGCTAAAGGTTCCACAGAAGCAAATAGAGATGAACAGAATGGACCCGATGTGCTGGCTTTACACTCATGTGTGATTTGTCATGAAATTTTTACAACTGAAAGTGACTTGCTTGATCACACTATTTTGTTACATGCTTCTTCACAGACTGATAGTGGTATTCTCGAACATCCTACTGAAGCCACGAAAAAAGGTACAAACGACTTTGATTTTGAAGCTGAGTGGCTTGTTTGCCGAATCTGTGAACGTGTTTTATCAACAATCTTAGAAAAGGAGCCAAACGGTGAGAAACCACTGAAAGAATCGATAAACTCTATGTCCATCATTTAA
Protein
MMFDPPDYPYKELAEVYETQSLLFSGNNETKTLEAPSIDTTDNQLTLESNVSGQYFNVESILVRESENLMEQATECYVVQDDNLFNFESTLLDENTVNQFLLPAKGSTEANRDEQNGPDVLALHSCVICHEIFTTESDLLDHTILLHASSQTDSGILEHPTEATKKGTNDFDFEAEWLVCRICERVLSTILEKEPNGEKPLKESINSMSII

Summary

Pfam
PF00096   zf-C2H2
Interpro
IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF57667   SSF57667       

Ontologies

Topology

Length:
211
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02141
outside
1  -  211
 
 

Population Genetic Test Statistics

Pi
237.128557
Theta
155.979716
Tajima's D
1.205311
CLR
0
CSRT
0.716264186790661
Interpretation
Uncertain
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