Gene

KWMTBOMO15200

Annotation

Yokozuna_[Bombyx_mori]

Location

Bomo_Chr25(-):6621253-6625228      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.966

CDS

ATGGCGGACGACGCTTCAAGAAAATTACTTCCAGAGTTTACTGGAACTAATTTCAGCACGTGGATATTTCGAATATCATGCATCCTAGAGGAAAAGGAATGCAAAGAAGCAATTGAAGATGGCATAACAGAGGAAATATTGAAGTCAGAAAAATTCAAAAAGAAAGACGCAAAAGCTAGAAGTTTGATAGTCAACTGCCTCTCAGACAAACACTTGGAATACGTCAGAAGCGCTACGAGTGCAAAAGAGATGATCGAAAACTTACGAAAAATATTCAAAAGAAAAAGTACGTTATCTGCGTTATACGTCAGGAAGAAATTATTAACCTTAAAATGTGACCCCAGTGTCGAACTGAGCGACCACTTCAACAATTTTGATATGTTAATAAGACAATTAGAAGAAACTGGAAGCACTGTAAATGAACAAGACAAGGTGTGCCACTTACTACTGACTATGCCTGACAGCTACAATACTACAATTGCCGCCTTAGAAACTACTAATGTGGAACTCACAACAGAGTATGTCAAAAGCAAATTGTTAGATGCAGAACTAAAAAACCAAAATAATTCAATGGAATCACAGGATGCACACAGCTTCCTCAGTTGCTTTAAATGTGGTAAAACTGGTCACAAAGCTATACAGTGCAGAACTGGACACTTAATGAGAGGACAGCATCGAGGCAAAATGGGCAACGTCGGATATTTCAACGGAAGTTACACTAGAGACTTCTATCGAGGCAACGGCAGAGACTTCAATCCAGGTAACGGCAGAGGCTTTAACCGAAGCAATCCCAGAGGCAACGTGAGAGGACAATCGAGGGGATCATCAAGGGACACCATACTCCAACAAGGAAAAAGTGCTTTAAGTGAGAGAAATCCATTTTCTTTTGTTGCCAGTGAAAAGGTACTATCTGTTGATGTGTATAATGAGGACATTAAGTTTATTATTGATTCAGGAGCATCTCAAAATTTAGTCATTGATAGTTATGAAAAGTACATGTCAAACATTGAATATTTAGAAACTAAAACTAAGATTTATGTTGCTAATGGTCAATATTTGTTTTCAAGTAAAAAAGGGATTTTAAATGTAAAATATAATAACTTACCTATTAAAATAGAAGCACTACTTGTCAAGGGGCTATCCCACAACTTATTATCTGTTAAAAAATTATTAGAGAAAGGAAATTCTGTCAGATTTCATAAAAATTCTGTATCAATTGCTAAAGGAAATAACATAATTTATGGTACCATGCTTAATAGTCTGTATGCAATCAATCTAACATTAAACTTAGAAAAATGTTATTCGATAAATAATGATAAAGATCTATGGCACAAAAGGTTAGGACATGCTAATAGAAAACACTTAAAATTATTGAAATTACCTATCTCAGAAAAACCATGTGGAATATGTGTAGAAGGAAAATCAACAAGATTACCATTCTCTACAACACCCAAGCCGAGATCAAAGTATATAGGAGAACTCATACACACAGATATATCAGGACCAATAAATATTCCTACACTTACAAATGAGGTATATTTTCATACAATTATAGATGATTACACACATTTCTGTGAGGTATACTTATTACAAAGAAAAAGTGAGGCAACCGATAGGCTCATAGAATATGTTAATAGAATGGAAAGACAAATAGAATGTAAAGTCAAGAAAATCAGAAGTGATAATGGTGGTGAGTTTAAAAATGAAAAACTAAATAAATTTTGCAAAGATAAGGGAATTGTTCAACAGTTTACTTTGCCTTATAGCCCACAATCAAACGGAGTTTCAGAACGCATGAACAGAAATATTTATAACAGAGCTCGGACTTTATTAATTGAATCTGGTTTACCAAAAACCTTATGGGGTGAAGCGGTGCGATGTGCTGTCTATCAAACCAACAGATGTCCATCGTCTGCTATCAACTTTCAAACTCCAGCAGAGAAAATGTTTGGAAACAAAGACTTAACAAGACTTAGGATATTTGGATCAAAATCATGGGTTCATATCATACCAAAACAAGATAAACTTTTACAAAGAGCTAAAGAAATGAGACTCGTAGGATATAGCCCAAATGGATATCGTCTATGGGACCCTACAAGTAATAAAGTGATAGTGTCAAGAGATGTCAGAATTGATGAAACTCAATTAAACTACAAGGAAACTGAAGAAAAGCATAACATAAAAGGAGAAACATACTATGAAGATGAATTAATACAAAATGAAGATACTGAGAAGGACACAAAAGATGACCAAGAGATAAGAATACTTAATGAGAATGATGAAAACATGCAACATGATAGAATACCTGATAAAACAAATAAAGAAGTATCAAAGAATAATCAAGATGATGAAGAAGAAAATGAAAAATTGAATAAAAAAGGTAGAATAAATATACAGAAATATATAACAAGATCAGGAAGAGAAATTCGCAAACCAAAAAACTTAGAAGAATATGATCTAAATATAGCATACTGTCTTTTATCGGGAGATCCACAAGAATTTGAAGATGCAATTCATGACAAAGACTGGGAAAAAGCAATAAAGACAGAATTAAATTCACAAGTGAAATTAGAGACATGGGAAGAAGCTACATTACCAATGGGAAGTAAAGCAATAGACACAAAATGGGTATTCAGAACTAAACAAAATGGAACCAAGAGAGCTCGATTAGTAGCGAAAGGTTTTCAGCAACAGAACAATGATAATCATTATGCTCCGGTAGCCAAATTGTCAACTATCAGATTAATGATGAGTTTAGCAGTTCAACTGGATTTGTCATTAAAGCAATTGGACGTACCAACAGCCTTCTTAAATGGAAAATTAAATGACAATGTCTATATAAAATGTCCCAAAGGAATGGAAATTAGTGAAGGAAAAGTTTTAAAACTTAAAAGGGCTTTGTATGGATTAAAAGAAGCACCTAAATGCTGGAATCAAAGATTTAATAATTTTGTCATTCAGAAAGGGTTTGTACAATCACAGCATGATTTATGTCTATATGGAAAAGGAAAAATCTGGATATTACTCTATGTGGATGATATTTTATACCTTGGAAATAGCAATGAGATGATAAAGGAATTAGAAAAGGAATTTAAAGTAAAAAACTTAGGAGAAGTACATCAATATTTAGGATTGGAAGTAACAAGAACAGAAGACAGCTTGGAAATAAGACAAACAGAAATAATTAAAAGACTCCTGGAGAAATATCACATGCAAGATTGCAAATCAAGCAAGACTCCAATGGAAATTAATTTTAATGTAAACATTCCATCACCATCAGATATAATTGAAGTACCCTTCAAGGAATTAATAGGATCTTTGTTGTACATTGCTGTGAATAGTCGACCGGATATTGCTTATGCTGTATCATTCTTAAGCAGATTCTTAGATAAACCCACACAAGAATTATGGACAGCAAGTAAGAGAGTGTTACGTTATCTTAAAGGAACCTCGCATCAGGGACTGATTTATAGGAAGACCGAAGAGTACACAAAACTTATAGCCTACTCAGACGCTGACTGGGCAGCAGATAGAACAGACCGTAAGAGCACAAGTGGCTGTGCTATATATCAAGGCCAGAACTTAATAACTTGGTTCTCTAGAAAGCAAACATGTACCGCCCTGTCAACAGCTGAAGCTGAGTATGTGGCTGGAGCACACTCAATGAGTGAACTTATTCACATCAAAGGATACATACATACTTTCTGA

Protein

MADDASRKLLPEFTGTNFSTWIFRISCILEEKECKEAIEDGITEEILKSEKFKKKDAKARSLIVNCLSDKHLEYVRSATSAKEMIENLRKIFKRKSTLSALYVRKKLLTLKCDPSVELSDHFNNFDMLIRQLEETGSTVNEQDKVCHLLLTMPDSYNTTIAALETTNVELTTEYVKSKLLDAELKNQNNSMESQDAHSFLSCFKCGKTGHKAIQCRTGHLMRGQHRGKMGNVGYFNGSYTRDFYRGNGRDFNPGNGRGFNRSNPRGNVRGQSRGSSRDTILQQGKSALSERNPFSFVASEKVLSVDVYNEDIKFIIDSGASQNLVIDSYEKYMSNIEYLETKTKIYVANGQYLFSSKKGILNVKYNNLPIKIEALLVKGLSHNLLSVKKLLEKGNSVRFHKNSVSIAKGNNIIYGTMLNSLYAINLTLNLEKCYSINNDKDLWHKRLGHANRKHLKLLKLPISEKPCGICVEGKSTRLPFSTTPKPRSKYIGELIHTDISGPINIPTLTNEVYFHTIIDDYTHFCEVYLLQRKSEATDRLIEYVNRMERQIECKVKKIRSDNGGEFKNEKLNKFCKDKGIVQQFTLPYSPQSNGVSERMNRNIYNRARTLLIESGLPKTLWGEAVRCAVYQTNRCPSSAINFQTPAEKMFGNKDLTRLRIFGSKSWVHIIPKQDKLLQRAKEMRLVGYSPNGYRLWDPTSNKVIVSRDVRIDETQLNYKETEEKHNIKGETYYEDELIQNEDTEKDTKDDQEIRILNENDENMQHDRIPDKTNKEVSKNNQDDEEENEKLNKKGRINIQKYITRSGREIRKPKNLEEYDLNIAYCLLSGDPQEFEDAIHDKDWEKAIKTELNSQVKLETWEEATLPMGSKAIDTKWVFRTKQNGTKRARLVAKGFQQQNNDNHYAPVAKLSTIRLMMSLAVQLDLSLKQLDVPTAFLNGKLNDNVYIKCPKGMEISEGKVLKLKRALYGLKEAPKCWNQRFNNFVIQKGFVQSQHDLCLYGKGKIWILLYVDDILYLGNSNEMIKELEKEFKVKNLGEVHQYLGLEVTRTEDSLEIRQTEIIKRLLEKYHMQDCKSSKTPMEINFNVNIPSPSDIIEVPFKELIGSLLYIAVNSRPDIAYAVSFLSRFLDKPTQELWTASKRVLRYLKGTSHQGLIYRKTEEYTKLIAYSDADWAADRTDRKSTSGCAIYQGQNLITWFSRKQTCTALSTAEAEYVAGAHSMSELIHIKGYIHTF

Uniprot

O96968   A0A0A9XG27   A0A1B6DFK3   A0A0A9WLY1   A0A0A9Z0I6   A0A146KTS1   + More
A0A146LV28   A0A1Y1L115   A0A0J7KI47   A0A1Y1MQF0   A0A023F102   A0A224XA26   J9KJ72   A0A0A9WKH5   A0A0A9WEX8   A0A0A9ZBW6   H6U1F0   A0A0T6AT79   A0A2N9GLP2   A0A2N9FMR2   A0A0P6ITU5   A0A0J7K689   A0A1Y1MJE9   A0A068B703   A0A1W7R685   A0A151TPU3   A0A151RPT4   A0A151TGP0   A0A2N9GHK9   A0A2N9J635   A0A0V0RWJ3   C0JJI2   A0A2N9JB15   A0A2M4CV35   A0A2P6SP23   A0A2N9FNY4   A0A2M3YZL7   A0A2N9I1L5   A0A251V331   A0A2R6RYD4   A0A2M3YZL3   Q9FFM0   A0A2N9IUL9   A0A0A9XEU3   A0A2N9GX95   A0A1Y1LCN3   A0A194QQM6   A0A2K3N065   A0A0V0G477   A0A0V1GTY0   A0A2N9HZ30   A0A1J3CVC5   A0A2K3MXK1   A0A0A1WXQ3   A0A1Y1M2G6   A0A2U1Q4F1   B1N668   A0A2R6QHR4   A0A251T6N3   A0A0K8U6X2   A0A0K8WJW9   A0A1Y1MP14   A0A0J7K7M6   A0A2K3MZ63   A0A2Z6MIS1   A0A0A1WFC7   A0A2P6R6N0   A0A2K3MYT4   A0A1J3ENS7   V9H1C3   A0A2Z6N0G5   A0A2K3MWU3   A0A2J7QWT7   Q2HU05   A0A2P6S100   A0A2N9EKW1   A0A151QSG7   A0A392LYY6   A0A2K3MV45   A0A355BEE2   A0A2N9H8E1   A0A2J7R668   W8AQ86  

Pubmed

10333565    25401762    26823975    28004739    25474469    22427337    + More
26999592    22057054    19251904    28538728    29661190    9330910    26354079    24500806    28382043    25830018    29703587    18339939    2904123    29922311    30148503    24495485   

EMBL

AB014676    BAA74713.1    GBHO01027564    JAG16040.1    GEDC01012841    GEDC01000503    + More
JAS24457.1    JAS36795.1    GBHO01035173    JAG08431.1    GBHO01004832    JAG38772.1    GDHC01019310    JAP99318.1    GDHC01007058    JAQ11571.1    GEZM01072005    JAV65635.1    LBMM01007046    KMQ90088.1    GEZM01028916    JAV86196.1    GBBI01004033    JAC14679.1    GFTR01008662    JAW07764.1    ABLF02041793    GBHO01036606    JAG06998.1    GBHO01036607    JAG06997.1    GBHO01002761    JAG40843.1    JN402333    AFB73912.1    LJIG01022881    KRT78250.1    OIVN01002055    SPD00174.1    OIVN01000991    OIVN01001835    SPC88370.1    SPC98114.1    GDUN01000694    JAN95225.1    LBMM01012772    KMQ86003.1    GEZM01032204    JAV84770.1    KF740825    AIC77183.1    GEHC01000966    JAV46679.1    CM003606    KYP69041.1    KQ483623    KYP44533.1    CM003608    KYP66220.1    OIVN01001931    SPC99063.1    OIVN01006387    SPD32065.1    JYDL01000068    KRX18751.1    FJ225394    FJ225395    ACN78973.1    OIVN01006466    SPD33659.1    GGFL01004951    MBW69129.1    PDCK01000039    PRQ60431.1    OIVN01001308    SPC92446.1    GGFM01000952    MBW21703.1    OIVN01004651    SPD18552.1    CM007893    OTG30017.1    NKQK01000002    PSS35035.1    GGFM01000953    MBW21704.1    AB005236    BAB09923.1    OIVN01006211    SPD27863.1    GBHO01024362    JAG19242.1    OIVN01002473    SPD03944.1    GEZM01063091    JAV69316.1    KQ461175    KPJ07802.1    ASHM01014513    PNX96445.1    GECL01003258    JAP02866.1    JYDP01000258    KRZ01816.1    OIVN01004766    SPD19126.1    GEVI01026597    GEVI01022915    JAU05723.1    JAU09405.1    ASHM01013569    PNX95528.1    GBXI01011094    JAD03198.1    GEZM01044912    JAV78046.1    PKPP01000428    PWA92889.1    EF094939    EF094940    ABO36622.1    ABO36636.1    NKQK01000016    PSS08126.1    CM007900    OTG06758.1    GDHF01029905    JAI22409.1    GDHF01000873    JAI51441.1    JAV86195.1    LBMM01012368    KMQ86259.1    ASHM01014140    PNX96091.1    DF973265    GAU23220.1    GBXI01017107    JAC97184.1    PDCK01000041    PRQ42077.1    ASHM01014005    PNX95963.1    GEVK01019149    JAU33683.1    X13291    CAA31653.1    DF973673    GAU37486.1    ASHM01013227    PNX95204.1    NEVH01009420    PNF33053.1    AC149577    ABD32582.1    PDCK01000040    PRQ52345.1    OIVN01000160    SPC75452.1    KQ484948    KYP33249.1    LXQA010000742    MCH80155.1    ASHM01012734    PNX94698.1    DNYX01000353    HBK84078.1    OIVN01002984    SPD07941.1    NEVH01006980    PNF36330.1    GAMC01018338    JAB88217.1   

Proteomes

UP000036403    UP000007819    UP000075243    UP000054630    UP000238479    UP000215914    + More
UP000241394    UP000053240    UP000236291    UP000055024    UP000245207    UP000235965   

PRIDE

O96968   

Pfam

PF00665   rve        + More
PF07727   RVT_2
PF13976   gag_pre-integrs
PF00098   zf-CCHC
PF13961   DUF4219
PF04500   FLYWCH

Interpro

IPR036397   RNaseH_sf        + More
IPR039537   Retrotran_Ty1/copia-like       
IPR001584   Integrase_cat-core       
IPR013103   RVT_2       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR025724   GAG-pre-integrase_dom       
IPR021109   Peptidase_aspartic_dom_sf       
IPR025314   DUF4219       
IPR007588   Znf_FLYWCH       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

O96968   A0A0A9XG27   A0A1B6DFK3   A0A0A9WLY1   A0A0A9Z0I6   A0A146KTS1   + More
A0A146LV28   A0A1Y1L115   A0A0J7KI47   A0A1Y1MQF0   A0A023F102   A0A224XA26   J9KJ72   A0A0A9WKH5   A0A0A9WEX8   A0A0A9ZBW6   H6U1F0   A0A0T6AT79   A0A2N9GLP2   A0A2N9FMR2   A0A0P6ITU5   A0A0J7K689   A0A1Y1MJE9   A0A068B703   A0A1W7R685   A0A151TPU3   A0A151RPT4   A0A151TGP0   A0A2N9GHK9   A0A2N9J635   A0A0V0RWJ3   C0JJI2   A0A2N9JB15   A0A2M4CV35   A0A2P6SP23   A0A2N9FNY4   A0A2M3YZL7   A0A2N9I1L5   A0A251V331   A0A2R6RYD4   A0A2M3YZL3   Q9FFM0   A0A2N9IUL9   A0A0A9XEU3   A0A2N9GX95   A0A1Y1LCN3   A0A194QQM6   A0A2K3N065   A0A0V0G477   A0A0V1GTY0   A0A2N9HZ30   A0A1J3CVC5   A0A2K3MXK1   A0A0A1WXQ3   A0A1Y1M2G6   A0A2U1Q4F1   B1N668   A0A2R6QHR4   A0A251T6N3   A0A0K8U6X2   A0A0K8WJW9   A0A1Y1MP14   A0A0J7K7M6   A0A2K3MZ63   A0A2Z6MIS1   A0A0A1WFC7   A0A2P6R6N0   A0A2K3MYT4   A0A1J3ENS7   V9H1C3   A0A2Z6N0G5   A0A2K3MWU3   A0A2J7QWT7   Q2HU05   A0A2P6S100   A0A2N9EKW1   A0A151QSG7   A0A392LYY6   A0A2K3MV45   A0A355BEE2   A0A2N9H8E1   A0A2J7R668   W8AQ86  

PDB

3S3N     E-value=4.66666e-08,     Score=142

KEGG

105842858    no KO assigned | (RefSeq) uncharacterized LOC105842858

GO

GO:0000943   GO:0015074   GO:0008270   GO:0003676   GO:0003964   GO:0004519   GO:0008233   GO:0004491   GO:0017183   GO:0006391   GO:0031167   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

PANTHER

PTHR11439  

Length:

1235

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00805999999999999

Exp number, first 60 AAs:

0.00128

Total prob of N-in:

0.00021

outside

1  -  1235

 

 

Pi

408.118205

Theta

225.041338

Tajima's D

2.524604

CLR

0

CSRT

0.947352632368382

Interpretation

Uncertain