Gene

KWMTBOMO15194

Pre Gene Modal

BGIBMGA004967

Annotation

PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]

Location

Bomo_Chr25(-):6486754-6519356      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.105 Nuclear   Reliability : 1.164

CDS

ATGAAAAATATACTTTTTAGATGCGACGTTTCTGATACAGAACACTTGTTGGTTCACCGGCGGAGAAATGTAACACGATGCTCGTTAGTGAGGAAAACGGGCAATGTACTCCCGTTAAAACGAAAACGCTTAAAACGTTCTTCAGATTCTCGTCCCGAGCTGGTGTATACGTTTATTGAGCAAGCGGTACAGCCTGGAGCGCAGGTGGCTTTAAAATGCTCGGCAGTGGGCGAGCCTCCCCCAAGGTTCAAGTGGACAGTGGACGGTCAGGCGATACCATCACATCACGGAGCGTCAATAACTGAAGGCAGAGAATCTGGGCCGTCTAGTTTAGGTCCCAGTAACAACTACGTGCTGTCCACTTTGTCTCTGAGCAGTGCCAGGGTTGAGCACGGCGGGAGATACGAATGTCGCGCCACCAATAATCACGGAAGTGTCGCTCACGCAGCGAGATTGAATGTTTACGGTCCCCCCTACATCCGAGCTATGAATCCCGTGAAGGCCGTCGCCGGAACTGAAGTAACCATTTGGTGTCCCTATTACGGATTCCCTATAGATTCAGTGAAATGGGAGGGAGGCGCCGGCATAGATCCGCGGTACCCGCAGTCAGATGGCCAGTTGACGATAACAAACGTTGATTGGAATAGAGATAAAGGAAGCTGGGTTTGTTCAGTTCTTACTCCTGGTGGAGAGCTGGCTAGGCGGGAGGTACAAATAACAGTGGTATCGCCGCCGGTATTATCGCCAATTGTGTTTCCGCCAGGACTTAGATCGGGAGATAGAGCTCAACTAACTTGCACGGTTACATCTGGAGATATGCCCGTTTATTTTTCCTGGTTAAAAGATCAAATCCCAATTTCAAGTGCACTTCAGGTAGATGAAAGAGGAGCAGAATTTTTCAGTATGCTCCTATTCAAGAGTTTGACTGCTGCACACAGTGGTACTTACACTTGTGTAGTCACGAATACAGCTGGAAAAGCTAATGTCTCTGTGGAATTAGCTATCAAAGTTCCCCCGTATTGGCAAATTGAACCTTCAGATGCTGCAGTGCTATTAAACGGATCGCTGACCGTTAGTTGTGAAGCACGTGGCCATCCACCACCAAATATATACTGGACTAAATTTTCGGGTAGTACCGAAACTTCATTAGGTGGAGTATCGGACCCCGTCGTTTTGACAAATGGATCTTTGAGATTAGAATCAGCGCGAGCGGAACATTCTGGAAAGTACCGTTGCAGGGCTGACAATGGTGTCGCTCCACCCTTATCTAAAACTCTTAATATACATGTTAATGAGCCAGCAAGATTTGAAATTCAGTCAATCAACGTTACGGCGAAGCTTGGTGAAACGGTGAGGTTAGCATGCGTAGCTCGTGGAGATAGCCCCCTGTCTACGGCGTGGAGTCATTCCGGAAGAGCTCTACCGAACTCAGACTACAGAATGAGTATTTCAGAAACAAGGAGCACTGAGGGATTGAGAAGTGAATTAGTCATAGAGAGAGCTGATCGTAGAGATTCTGGAGTGTATCGATGCCAAGCTTCTAATCCTTTCGGTAGATCGGATCATTTTGTGCATCTCGCCGTTCAAGAACCACCAGAACCGCCATCTAATTTTCGAGTTTTGGATACAACTTCACGCTCTGTTCGGTTGCAATGGAGAAGACCGTACGATGGAAATTCTCCAGTTTTGGGCTACGTCGTTCAGTATAGAAAACATGATTCCACAAGTTCGGATCTATGGAGAGATGCCGAGACCCATAATGTTACAGTATCTGTGCAAAGCGGTAATTCCTACTCTGAGACCGAAAGCGCGACGATAAATGGGTTGGAACCAGCTACACCTTATTTGGTTAGAGCGCGCACTGTTACAGCGCAGTTTGCTTCAGCACATACGCGAGCCTTACTTGCGTTGACTTTACATGAGCCTCCATCACGGACTCCGATTAATTTGCGTGCGTCTACTCCTAGACCTTCTACAATTGAATTGAGTTGGCAGGCGCCACCTGCTTCTTCGTGGAATGGAGAATTATTAGGATACACCGTATGGTGGTGGGCATCAGCTGATGGCTCATTATCGGGTGGTGCTGTGGGCATGGAGTTTGCCACTGTTCGAGGACAGGTTACAAAATATATTATAGAGGGTCTTGAGCACTATACACGGTATTCTGTTAGTGTACGAGCTTTTAATAGCGCTGGAGCCGGTCCAGCATCGGCGCCAGTTAATACTCTAACGCAAGAAAACGGTAAGATTAAATTTTACTTCCTGAATCGTGCTATGGTATAA

Protein

MKNILFRCDVSDTEHLLVHRRRNVTRCSLVRKTGNVLPLKRKRLKRSSDSRPELVYTFIEQAVQPGAQVALKCSAVGEPPPRFKWTVDGQAIPSHHGASITEGRESGPSSLGPSNNYVLSTLSLSSARVEHGGRYECRATNNHGSVAHAARLNVYGPPYIRAMNPVKAVAGTEVTIWCPYYGFPIDSVKWEGGAGIDPRYPQSDGQLTITNVDWNRDKGSWVCSVLTPGGELARREVQITVVSPPVLSPIVFPPGLRSGDRAQLTCTVTSGDMPVYFSWLKDQIPISSALQVDERGAEFFSMLLFKSLTAAHSGTYTCVVTNTAGKANVSVELAIKVPPYWQIEPSDAAVLLNGSLTVSCEARGHPPPNIYWTKFSGSTETSLGGVSDPVVLTNGSLRLESARAEHSGKYRCRADNGVAPPLSKTLNIHVNEPARFEIQSINVTAKLGETVRLACVARGDSPLSTAWSHSGRALPNSDYRMSISETRSTEGLRSELVIERADRRDSGVYRCQASNPFGRSDHFVHLAVQEPPEPPSNFRVLDTTSRSVRLQWRRPYDGNSPVLGYVVQYRKHDSTSSDLWRDAETHNVTVSVQSGNSYSETESATINGLEPATPYLVRARTVTAQFASAHTRALLALTLHEPPSRTPINLRASTPRPSTIELSWQAPPASSWNGELLGYTVWWWASADGSLSGGAVGMEFATVRGQVTKYIIEGLEHYTRYSVSVRAFNSAGAGPASAPVNTLTQENGKIKFYFLNRAMV

Uniprot

A0A194RK19   A0A2A4K6Y1   A0A194PHW4   A0A0L7KXG9   A0A088APY9   A0A158NJC3   + More
A0A0N0BC89   A0A195BJQ9   A0A195EYM2   A0A3L8DRQ5   A0A151JRW6   F4W742   A0A139WPP7   A0A139WPF3   A0A139WPD8   A0A151IA46   A0A0L0C0J5   A0A1I8Q177   A0A1I8Q183   A0A1I8Q151   A0A2W1BND6   A0A1J1HP71   A0A2A4J5Z6   A0A1B0FNH0   A0A0M4ETQ6   A0A1A9ZZV3   A0A3S2NBJ4   A0A0J7KUU3   A0A232F8U8   A0A0Q9X218   K7J3G0   B4K7M7   A0A2H1VAH3   A0A0Q9X715   A0A212FEX3   A0A0Q9WFX9   B4LY43   W8BHF6   A0A0Q9WGA5   A0A0R3NG76   Q29A88   B3LVQ3   A0A0R3NK49   A0A0R3NGP1   A0A0R3NGB7   A0A0P8XZR3   B4G2L9   A0A194PP52   A0A2J7PQK5   A0A2J7PQP1   A0A3B0KAQ1   A0A1W4V5H6   A0A2J7PQK1   A0A336KKP0   A0A1W4UT57   A0A336M8I3   B4N9U7   A0A0R1E4W5   Q7KSE9   Q9VEJ5   B4IBG9   A0A1W4USR1   A0A0R1E3C0   A0A0R1E506   B4PVB9   A8JR35   A0A0N1PFK5   E9J1T2   A0A2H1VFK8   A0A3S2N7J8   N6TSR9   U4U3K5   A0A2W1BN39   A0A182U083   A0A1W7R6Y5   A0A182WK19   W5JR02   A0A182FCX3   A0A182VI12   A0A182QYC3   A0A1Y9GLM1   A0A1A9X9W6   A0A182RKW3   A0A182M182   A0A084WCP8   A0A182J4M0   A0A182NQ64   A0A2A4JM43   A0A194PQH1   A0A1B0BV85   A0A1B0CHP3   A0A0L7LB63   A0A182T4F2   A0A2J7PZP0   E2A3Y9   A0A2A4JQ07  

Pubmed

26354079    26227816    21347285    30249741    21719571    18362917    + More
19820115    26108605    28756777    28648823    17994087    20075255    22118469    24495485    15632085    23185243    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    21282665    23537049    20920257    23761445    24438588    20798317   

EMBL

KQ460045    KPJ18178.1    NWSH01000091    PCG79678.1    KQ459604    KPI92314.1    + More
JTDY01004800    KOB67736.1    ADTU01017524    ADTU01017525    ADTU01017526    ADTU01017527    ADTU01017528    ADTU01017529    ADTU01017530    ADTU01017531    ADTU01017532    ADTU01017533    KQ435922    KOX68634.1    KQ976453    KYM85408.1    KQ981920    KYN32984.1    QOIP01000005    RLU23107.1    KQ978579    KYN30034.1    GL887813    EGI69926.1    KQ971307    KYB29801.1    KYB29803.1    KYB29804.1    KQ978255    KYM95887.1    JRES01001161    KNC24949.1    KZ149956    PZC76468.1    CVRI01000006    CRK88017.1    NWSH01002784    PCG67537.1    CCAG010010693    CCAG010010694    CCAG010010695    CCAG010010696    CCAG010010697    CP012526    ALC46292.1    RSAL01000273    RVE43150.1    LBMM01003023    KMQ94061.1    NNAY01000640    OXU27246.1    CH933806    KRG01529.1    EDW15371.2    ODYU01001341    SOQ37392.1    KRG01530.1    AGBW02008880    OWR52305.1    CH940650    KRF83564.1    EDW67931.1    GAMC01005845    JAC00711.1    KRF83565.1    CM000070    KRT00045.1    KRT00046.1    KRT00048.1    KRT00049.1    EAL27462.3    CH902617    EDV43677.1    KRT00047.1    KRT00044.1    KRT00043.1    KPU80416.1    CH479179    EDW24064.1    KQ459597    KPI95211.1    NEVH01022635    PNF18619.1    PNF18616.1    OUUW01000005    SPP80648.1    PNF18614.1    UFQS01000550    UFQT01000550    SSX04801.1    SSX25164.1    SSX04800.1    SSX25163.1    CH964232    EDW80662.2    CM000160    KRK02722.1    AE014297    AAS65164.2    AAF55426.3    CH480827    EDW44727.1    KRK02723.1    KRK02724.1    EDW95788.2    KRK02725.1    ABW08696.1    KQ460970    KPJ10147.1    GL767674    EFZ13261.1    ODYU01002306    SOQ39628.1    RSAL01000247    RVE43549.1    APGK01020326    APGK01020327    APGK01020328    KB740193    ENN81073.1    KB631669    ERL85186.1    PZC76469.1    GEHC01000744    JAV46901.1    ADMH02000362    ETN66827.1    AXCN02001019    AXCN02001020    APCN01002803    APCN01002804    APCN01002805    APCN01002806    APCN01002807    AXCM01004495    AXCM01004496    ATLV01022806    ATLV01022807    ATLV01022808    ATLV01022809    ATLV01022810    ATLV01022811    KE525337    KFB47992.1    NWSH01001004    PCG73155.1    KPI95213.1    JXJN01021159    JXJN01021160    AJWK01012559    JTDY01001854    KOB72718.1    NEVH01020333    PNF21807.1    GL436519    EFN71841.1    NWSH01000925    PCG73523.1   

Proteomes

UP000053240    UP000218220    UP000053268    UP000037510    UP000005203    UP000005205    + More
UP000053105    UP000078540    UP000078541    UP000279307    UP000078492    UP000007755    UP000007266    UP000078542    UP000037069    UP000095300    UP000183832    UP000092444    UP000092553    UP000092445    UP000283053    UP000036403    UP000215335    UP000009192    UP000002358    UP000007151    UP000008792    UP000001819    UP000007801    UP000008744    UP000235965    UP000268350    UP000192221    UP000007798    UP000002282    UP000000803    UP000001292    UP000019118    UP000030742    UP000075902    UP000075920    UP000000673    UP000069272    UP000075903    UP000075886    UP000075840    UP000092443    UP000075900    UP000075883    UP000030765    UP000075880    UP000075884    UP000092460    UP000092461    UP000075901    UP000000311   

PRIDE

Q7KSE9    Q9VEJ5   

Pfam

PF00041   fn3        + More
PF07679   I-set
PF00047   ig
PF10523   BEN
PF02854   MIF4G

Interpro

IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf       
IPR013098   Ig_I-set       
IPR036116   FN3_sf       
IPR003961   FN3_dom       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       
IPR018379   BEN_domain       
IPR013087   Znf_C2H2_type       
IPR003890   MIF4G-like_typ-3       
IPR016021   MIF4-like_sf       
IPR016024   ARM-type_fold       
IPR027413   GROEL-like_equatorial_sf       
IPR003006   Ig/MHC_CS       

SUPFAM

SSF49265   SSF49265        + More
SSF48726   SSF48726       
SSF48371   SSF48371       
SSF48592   SSF48592       

Gene 3D

2.60.40.10     1.25.40.180     1.10.560.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A194RK19   A0A2A4K6Y1   A0A194PHW4   A0A0L7KXG9   A0A088APY9   A0A158NJC3   + More
A0A0N0BC89   A0A195BJQ9   A0A195EYM2   A0A3L8DRQ5   A0A151JRW6   F4W742   A0A139WPP7   A0A139WPF3   A0A139WPD8   A0A151IA46   A0A0L0C0J5   A0A1I8Q177   A0A1I8Q183   A0A1I8Q151   A0A2W1BND6   A0A1J1HP71   A0A2A4J5Z6   A0A1B0FNH0   A0A0M4ETQ6   A0A1A9ZZV3   A0A3S2NBJ4   A0A0J7KUU3   A0A232F8U8   A0A0Q9X218   K7J3G0   B4K7M7   A0A2H1VAH3   A0A0Q9X715   A0A212FEX3   A0A0Q9WFX9   B4LY43   W8BHF6   A0A0Q9WGA5   A0A0R3NG76   Q29A88   B3LVQ3   A0A0R3NK49   A0A0R3NGP1   A0A0R3NGB7   A0A0P8XZR3   B4G2L9   A0A194PP52   A0A2J7PQK5   A0A2J7PQP1   A0A3B0KAQ1   A0A1W4V5H6   A0A2J7PQK1   A0A336KKP0   A0A1W4UT57   A0A336M8I3   B4N9U7   A0A0R1E4W5   Q7KSE9   Q9VEJ5   B4IBG9   A0A1W4USR1   A0A0R1E3C0   A0A0R1E506   B4PVB9   A8JR35   A0A0N1PFK5   E9J1T2   A0A2H1VFK8   A0A3S2N7J8   N6TSR9   U4U3K5   A0A2W1BN39   A0A182U083   A0A1W7R6Y5   A0A182WK19   W5JR02   A0A182FCX3   A0A182VI12   A0A182QYC3   A0A1Y9GLM1   A0A1A9X9W6   A0A182RKW3   A0A182M182   A0A084WCP8   A0A182J4M0   A0A182NQ64   A0A2A4JM43   A0A194PQH1   A0A1B0BV85   A0A1B0CHP3   A0A0L7LB63   A0A182T4F2   A0A2J7PZP0   E2A3Y9   A0A2A4JQ07  

PDB

3DMK     E-value=1.55539e-51,     Score=515

KEGG

101744074    K06768 Down syndrome cell adhesion molecule-like protein 1 | (RefSeq) Down syndrome cell adhesion mo

GO

GO:0016021   GO:0003676   GO:0030017   GO:0042802   GO:0007156   GO:0005887   GO:0005515   GO:0004672   GO:0006468   GO:0017183   GO:0006391   GO:0031167   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

Length:

760

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0727800000000001

Exp number, first 60 AAs:

7e-05

Total prob of N-in:

0.00033

outside

1  -  760

 

 

Pi

238.390138

Theta

181.182604

Tajima's D

1.515647

CLR

0.213102

CSRT

0.784010799460027

Interpretation

Uncertain