Silkworm Genome Informatics Database

Gene

KWMTBOMO15187

Pre Gene Modal

BGIBMGA013019

Annotation

PREDICTED:_uncharacterized_protein_LOC105842057_[Bombyx_mori]

Location

Bomo_Chr25(+):6394447-6395855 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.285

CDS

ATGTCAACACATGAGTCATCGTCACAAATCATAGAAACAACTTCTAAGGAACTAATGCAATACAAGGACAGGAGCAATTTAAATGAACAAAACAACGATGGTTCAGAAGATTTCACCACAATGGCAGCCCTCAATGAATTAACGACAATGCCAACAGACGTAGAACTTTTGCTAAATGAACCAGAACTGTCAACGCATGAACCTCAATCCAAAGACACTGGCACTTCTAAAACAAACACGATGATTGATGATTATTCAGGAACCTCAGGACACCTAAAACCTCTGAACGTTGAACTTCAGCATCAGGGGGTTGAGGAATTATCTTTGTCATCCTGTATAAATCTTACATCGACAAACGATCCAATACCAGAAGCTGTACAAATGGTTGAGGTTATTTCTGAGTGTGAAAAAGAAAACCAAACACCAATATACGTAATACCTATTCCATCCACTAGTCGTCAAAGTTTAGAGCTGATTGGAGAAAAATGGGTACTAGTGGATGACATGCCAACCGAAGTCCCTTCAAAGAGTCCAATAAAGAAACAAAATATAAAAGATTTTTTAAAGTTACCAAAGACTCCAATTAAAACACAAAAAGCTGGTATAGAACGTCGCTCTTTTGTTTTAACGAGTAAAGATTGGGAAGCTGTAGAACTAGAAAAACAACAAAAAAAGATGAAAGAGATACAAGAAAAGGAGAACAAACGAATAGCAAGACTAGAAAAAGCCAAAGAGAAACGCTTACTCAAGGAAACAAAACAAGCTGAAACTATAAATAAAAAGAACAAAGCTAAAAATTTAAATTTAATTAAGAAAAGTAAGCCAAATTCTGATAGTATCAAATCAAAAATTGTTATTCAATCAAATGTTTTAATTAAGCCTGCAAATAGAATCTCAAGTGATATTAAAGAAAAAAGAGAATATACAAAAGAAATTAAAAAAGGACCTATGAACGAAGTTAAACCTGCAGATATTACTGCCCTGAAGGAAATAAAAAACAGGCCAATTTTAGATGCAGTTGAAGCTGCAAATGAAAGACTCTTTAAAGAATCGGAACAAGTACAGATGGTAAAAAAAGAATTAAAGAAAGGACCAATTTTAGATGAACTTAAACCTCCGAAAATAACTTTTCGAGATTCAAGGGAAACCGGAAAAGATAAGAAGATAAAAATTAAAGTAAATAGATTGAGACCAATGACAGATGAAGAATTGTTAAAAATGTTGGAAGATGATTAG

Protein

MSTHESSSQIIETTSKELMQYKDRSNLNEQNNDGSEDFTTMAALNELTTMPTDVELLLNEPELSTHEPQSKDTGTSKTNTMIDDYSGTSGHLKPLNVELQHQGVEELSLSSCINLTSTNDPIPEAVQMVEVISECEKENQTPIYVIPIPSTSRQSLELIGEKWVLVDDMPTEVPSKSPIKKQNIKDFLKLPKTPIKTQKAGIERRSFVLTSKDWEAVELEKQQKKMKEIQEKENKRIARLEKAKEKRLLKETKQAETINKKNKAKNLNLIKKSKPNSDSIKSKIVIQSNVLIKPANRISSDIKEKREYTKEIKKGPMNEVKPADITALKEIKNRPILDAVEAANERLFKESEQVQMVKKELKKGPILDELKPPKITFRDSRETGKDKKIKIKVNRLRPMTDEELLKMLEDD

Uniprot

H9JU07 H9JXQ7

Pubmed

19121390

EMBL

BABH01003862 BABH01045554

Proteomes

UP000005204

PRIDE

H9JU07 H9JXQ7

Pfam

PF03184 DDE_1 + More
PF05225 HTH_psq

Interpro

IPR004875   DDE_SF_endonuclease_dom        + More
IPR006600   HTH_CenpB_DNA-bd_dom
IPR009057   Homeobox-like_sf
IPR007889   HTH_Psq

SUPFAM

SSF46689 SSF46689

ProteinModelPortal

H9JU07 H9JXQ7

KEGG

105842057 no KO assigned | (RefSeq) uncharacterized LOC105842057

GO

GO:0003677

Length:

411

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00757

outside

1 - 411

Pi

395.729316

Theta

196.23495

Tajima's D

3.14557

CLR

1.092569

CSRT

0.984150792460377

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree