SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15185
Pre Gene Modal
BGIBMGA004971
Annotation
PREDICTED:_exocyst_complex_component_5_[Amyelois_transitella]
Full name
Exocyst complex component 5      
Alternative Name
Exocyst complex component Sec10
Location in the cell
Nuclear   Reliability : 2.417
 

Sequence

CDS
ATGATGAACCAATATATGAGAGAATTAGAACAGGATCCTTTTGATCCTGATGAATTTGTGGAGAGAATGGTGCGACGTAGCATGCAGGAATCCCGTCTCAAAGATGACCAGTTCGACCCCGAAATGATACATGATATATTTACACAAGCCATACAAGATTTAAAGGTTCTTCAAGAGAGGCAAGAAAGAAAATGTGCTAGACTGGAACAGGCAGTGCAGGAAGAAGAAAAACTATATGGTGCTAAGCTATCAGAAATTATGGATCAACACTTGCATTGTGTGGGGGTGTTTAGTTCATTGGACGAACGTATGTCTCGTTGTGGCGGACGTGCGCTAAACGTAGGGGAAAAATTGGGAGCGGCACGAGCACCAAGAGCCAGAGCTGCAGCAGCAAGGGACCTTCTTTCACATTTAACACATTTCCTAAGCCCGGGTCCAGTTATAGTGGATCTATTTAGTGATCCCAACAAGCTCAATGAAGCAGCAGATGTTATTCAAAAGTTACATACAATAGCTCAAGAACTTCCACCAGAGAAATTTGAAATAGCCAAAAAGAAAATAGAAGCTAAATATGACGAGATTGAAAGAACTTTAATTGATGAATTTGGAAAAGCTCAAAATCAAGGGAATATGGTTAAAATGAAAGAGATTGCTAACATTATGACCAACTTCAAGGGCTACTCTCAGTGCATCGATGCATACATTGAGACCAGCCAAATGAATGCTCTTTTAGGCAAAGACATATTTTCAGCCGTTCTGCCACTGTGTAAGAAAAATTATAATATTATTTGTAACGTGTTTCCCAATCCTGATCAAGTGATGAGCAAATTTGTACTAAACATTTTCCATTTGAAACTACAGAAATATATACAGACTAAGCTGGCTGACAAAAATGATGTTGAAAAATATTTGAAAAACTTGTATGATATGTATAACAGTACACAACGTGTATGTGACGAGCTGGTGAACGCTAGTTTCGTGTCAGCTGATAGCAACAGCAGCACCGGCGACCTGCGACGCGAGGCCCTCGTCAACGGAGCCCTGGCCGGCGCCAACGACGGATACGCCGCCATGGAGGCCAGGCGTCTCAAGGCGATCTTGTCGAACGACTTAAACTCTTACTATGCAGAGAAACAACACGTTAAGAAGCAGATACAAGGTGGCGGGTAA
Protein
MMNQYMRELEQDPFDPDEFVERMVRRSMQESRLKDDQFDPEMIHDIFTQAIQDLKVLQERQERKCARLEQAVQEEEKLYGAKLSEIMDQHLHCVGVFSSLDERMSRCGGRALNVGEKLGAARAPRARAAAARDLLSHLTHFLSPGPVIVDLFSDPNKLNEAADVIQKLHTIAQELPPEKFEIAKKKIEAKYDEIERTLIDEFGKAQNQGNMVKMKEIANIMTNFKGYSQCIDAYIETSQMNALLGKDIFSAVLPLCKKNYNIICNVFPNPDQVMSKFVLNIFHLKLQKYIQTKLADKNDVEKYLKNLYDMYNSTQRVCDELVNASFVSADSNSSTGDLRREALVNGALAGANDGYAAMEARRLKAILSNDLNSYYAEKQHVKKQIQGGG

Summary

Subunit
The exocyst complex is composed of Sec3/Exoc1, Sec5/Exoc2, Sec6/Exoc3, Sec8/Exoc4, Sec10/Exoc5, Sec15/Exoc6, Exo70/Exoc7 and Exo84/Exoc8.
Similarity
Belongs to the SEC10 family.
Keywords
Coiled coil   Complete proteome   Exocytosis   Protein transport   Reference proteome   Transport  
Feature
chain  Exocyst complex component 5
EMBL
BABH01029921    BABH01029922    ODYU01009039    SOQ53152.1    GDQN01002801    JAT88253.1    + More
KQ460045    KPJ18183.1    NWSH01000091    PCG79687.1    AGBW02013634    OWR43062.1    KQ459604    KPI92308.1    RSAL01000329    RVE42509.1    GDQN01003831    JAT87223.1    KK853567    KDR06665.1    NEVH01013243    PNF29480.1    GECZ01018271    JAS51498.1    KZ288292    PBC29100.1    GECU01032714    JAS74992.1    GL888070    EGI68025.1    ADTU01009939    KK107182    QOIP01000011    EZA55921.1    RLU16558.1    GEBQ01026844    GEBQ01025522    GEBQ01022292    JAT13133.1    JAT14455.1    JAT17685.1    KQ971352    EFA06250.1    CH933806    EDW14265.1    GL436037    EFN72395.1    GL451538    EFN79079.1    AJVK01059305    KQ414894    KOC59711.1    NNAY01001403    OXU24091.1    GBYB01005194    GBYB01005197    JAG74961.1    JAG74964.1    GEDC01019012    JAS18286.1    KQ434905    KZC11283.1    KQ435736    KOX77029.1    CH940656    EDW58607.1    GEDC01026866    JAS10432.1    CM000070    EDY68045.1    CP012526    ALC45976.1    CH964232    EDW81193.1    KQ977276    KYN04436.1    CM000160    EDW99001.1    CH902617    EDV44266.1    CH479179    EDW24428.1    BT150181    AGR50375.1    AJ242993    AJ242992    AE014297    AY058414    CH480815    EDW43436.1    OUUW01000007    SPP82711.1    CM000364    EDX14166.1    CH954182    EDV53911.1    BT014642    AAT27266.1    AJWK01006156    CH916369    EDV93044.1    KQ981305    KYN42899.1    APGK01035349    KB740923    ENN78287.1    PYGN01000582    PSN43859.1    ENN78288.1    KQ982686    KYQ52294.1    KQ976455    KYM85083.1    CH477325    EAT43492.1    JXUM01042954    JXUM01044211    KQ561391    KQ561344    KXJ78726.1    KXJ78892.1    JRES01000028    KNC34811.1    DS232039    EDS32819.1    GGMR01014954    MBY27573.1    GFDL01009872    JAV25173.1    CCAG010000199    AXCM01000330    LBMM01001666    KMQ95923.1    GEZM01029807    GEZM01029806    JAV85916.1    GFXV01004213    MBW16018.1    ABLF02038573    ATLV01026902    KE525420    KFB53571.1    ADMH02002100    ETN59197.1    AAAB01008880    EAA08562.4    APCN01002556    GBXI01007566    GBXI01003177    JAD06726.1    JAD11115.1    AXCN02001158    GBGD01000638    JAC88251.1    GECL01002833    JAP03291.1    GGFK01007844    MBW41165.1    GDKW01000800    JAI55795.1    JXJN01015471    JXJN01015472    GAMC01007505    JAB99050.1    GAKP01010253    GAKP01010251    GAKP01010249    GAKP01010247    JAC48703.1   
Pfam
PF07393   Sec10        + More
PF00071   Ras
PF02221   E1_DerP2_DerF2
Interpro
IPR009976   Sec10-like        + More
IPR033960   EXOC5/Sec10       
IPR001806   Small_GTPase       
IPR027417   P-loop_NTPase       
IPR005225   Small_GTP-bd_dom       
IPR014756   Ig_E-set       
IPR003172   ML_dom       
SUPFAM
SSF52540   SSF52540        + More
SSF81296   SSF81296       
PDB
5H11     E-value=5.04075e-23,     Score=266

Ontologies

Topology

Length:
389
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00464999999999998
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01611
outside
1  -  389
 
 

Population Genetic Test Statistics

Pi
382.373393
Theta
232.684526
Tajima's D
2.315959
CLR
0
CSRT
0.92390380480976
Interpretation
Uncertain
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