SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15184
Pre Gene Modal
BGIBMGA004971
Annotation
PREDICTED:_exocyst_complex_component_5_[Plutella_xylostella]
Full name
Exocyst complex component 5      
Alternative Name
Exocyst complex component Sec10
Location in the cell
Cytoplasmic   Reliability : 1.359 Golgi   Reliability : 1.008 Nuclear   Reliability : 1.097
 

Sequence

CDS
ATGCTCAACGATGCTAAAACGTCTTTCCTTAGATGTAAAACGCTGTGTACGCCCAATGAATTGCCGCACACAGCCATGACTCTACTGGAGGTGGTCACGCAACATTTACTGATAGAACACGTTGATTATGCATTGGATTTGGGTCTGCAGTCTATACCTATCGCGGAAGGCAAGTCGCCACCTCAGATATATTTCTTTGATACTGTAAAACAAGCTAATGTAATTGTGAGAATGTTCGAGGAACATTTCCAGGAGTCGATTTTACCTTGTATAAGCTCATCGTCGAAACAAACAGAATGTTTACACAAGAAGACCGCTATAATGGACCAACTCGAGAGCAAACTTGACGCTGGCTTGGAACGTGCTATATCGGCTATAGTGAGCTGGGTGAAGCTGCATCTGCAGACCGAACAAAAGAAGACTGACTTCAAACCGGAAGGGGACATCGATACTATAGCGTCACCAGCTTGCCTAGCAGTGGTGTCCTATTTGAATTCGGTAATGGATAAAATACACGATGGTTTGGAAGACGACAATAGAAATTCCATCTCGTTGGAGCTGGCCGTGAGACTGCACAGGGTTATATACGAACACCTGCATAACTTCCAGTTTAATTCGGCAGGTGCTATGATAGCGATATGCGACGTGAAGGAGTACAGGTCGGCCGTGTGCGGGCGCGGCTCGAGGGCGGCTCCGGCTCCGGCCCACGGGCTGTTCGACGCTCTGCACGCGCTCTGCAATCTGCTGCTCGTCAAACCGGAGAACCTGCATCAGGTTTGCGAGGGAGAGACCCTGGCGGAGTTTGATCATTCGATTCTGTTGAGCTTCATACAGCTCCGAGCGGATTACAAGAGTCACAAGCTATCCACCTTCCTCAAGGGACTGTCTTAA
Protein
MLNDAKTSFLRCKTLCTPNELPHTAMTLLEVVTQHLLIEHVDYALDLGLQSIPIAEGKSPPQIYFFDTVKQANVIVRMFEEHFQESILPCISSSSKQTECLHKKTAIMDQLESKLDAGLERAISAIVSWVKLHLQTEQKKTDFKPEGDIDTIASPACLAVVSYLNSVMDKIHDGLEDDNRNSISLELAVRLHRVIYEHLHNFQFNSAGAMIAICDVKEYRSAVCGRGSRAAPAPAHGLFDALHALCNLLLVKPENLHQVCEGETLAEFDHSILLSFIQLRADYKSHKLSTFLKGLS

Summary

Subunit
The exocyst complex is composed of Sec3/Exoc1, Sec5/Exoc2, Sec6/Exoc3, Sec8/Exoc4, Sec10/Exoc5, Sec15/Exoc6, Exo70/Exoc7 and Exo84/Exoc8.
Similarity
Belongs to the SEC10 family.
Keywords
Coiled coil   Complete proteome   Exocytosis   Protein transport   Reference proteome   Transport  
Feature
chain  Exocyst complex component 5
EMBL
RSAL01000329    RVE42509.1    ODYU01009039    SOQ53152.1    KQ459604    KPI92308.1    + More
AGBW02013634    OWR43062.1    NWSH01000091    PCG79687.1    KQ460045    KPJ18183.1    BABH01029921    BABH01029922    GDQN01003831    JAT87223.1    GDQN01002801    JAT88253.1    GAIX01004723    JAA87837.1    NEVH01013243    PNF29480.1    KK853567    KDR06665.1    KQ434905    KZC11283.1    KQ414894    KOC59711.1    GL436037    EFN72395.1    KQ435736    KOX77029.1    GL451538    EFN79079.1    DS235199    EEB13168.1    LBMM01001666    KMQ95923.1    AJWK01006156    KQ978739    KYN28716.1    GL767819    EFZ13092.1    AJVK01059305    KQ981305    KYN42899.1    NNAY01001403    OXU24091.1    KQ977276    KYN04436.1    KQ982686    KYQ52294.1    KK107182    QOIP01000011    EZA55921.1    RLU16558.1    GECU01032714    JAS74992.1    ADTU01009939    KZ288292    PBC29100.1    KQ976455    KYM85083.1    GL888070    EGI68025.1    GEDC01026866    JAS10432.1    GECZ01018271    JAS51498.1    GEBQ01026844    GEBQ01025522    GEBQ01022292    JAT13133.1    JAT14455.1    JAT17685.1    GEDC01015115    JAS22183.1    GECL01002833    JAP03291.1    CP012526    ALC45976.1    GBGD01000638    JAC88251.1    CH916369    EDV93044.1    CVRI01000002    CRK86964.1    GDHF01020041    GDHF01011623    JAI32273.1    JAI40691.1    CH479179    EDW24428.1    JXUM01042954    JXUM01044211    KQ561391    KQ561344    KXJ78726.1    KXJ78892.1    CH933806    EDW14265.1    CM000070    EDY68045.1    CH940656    EDW58607.1    OUUW01000007    SPP82711.1    BT150181    AGR50375.1    AJ242993    AJ242992    AE014297    AY058414    CM000160    EDW99001.1    CH480815    EDW43436.1    DS232039    EDS32819.1    CH477325    EAT43492.1    CH902617    EDV44266.1    ATLV01026902    KE525420    KFB53571.1    CH954182    EDV53911.1    CVRI01000015    CRK90027.1    CH964232    EDW81193.1    GDKW01000800    JAI55795.1    GBXI01007566    GBXI01003177    JAD06726.1    JAD11115.1    AAAB01008880    EAA08562.4    APCN01002556    GAMC01007505    JAB99050.1    AXCM01000330    GFDL01009872    JAV25173.1    ADMH02002100    ETN59197.1    AXCN02001158    JH816014    EKC23175.1    KQ971352    EFA06250.1    GAKP01010253    GAKP01010251    GAKP01010249    GAKP01010247    JAC48703.1    GBRD01009645    JAG56179.1    AMQN01005993    KB297336    ELU10626.1    GGFK01007844    MBW41165.1    GL733196    EFX63140.1    GEZM01029807    GEZM01029806    JAV85916.1    GBHO01042240    JAG01364.1    GBHO01025450    JAG18154.1    GDIQ01188395    JAK63330.1    NEDP02001218    OWF53753.1   
Pfam
PF07393   Sec10        + More
PF00071   Ras
Interpro
IPR033960   EXOC5/Sec10        + More
IPR009976   Sec10-like       
IPR001806   Small_GTPase       
IPR027417   P-loop_NTPase       
IPR005225   Small_GTP-bd_dom       
SUPFAM
SSF52540   SSF52540       
PDB
5H11     E-value=9.80773e-69,     Score=659

Ontologies

Topology

Length:
296
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01057
Exp number, first 60 AAs:
0.0047
Total prob of N-in:
0.01639
outside
1  -  296
 
 

Population Genetic Test Statistics

Pi
246.245313
Theta
146.364783
Tajima's D
2.328162
CLR
0.267053
CSRT
0.924403779811009
Interpretation
Uncertain
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