SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15182
Pre Gene Modal
BGIBMGA004972
Annotation
ETS-like_protein_pointed?_isoform_P2/D_[Papilio_machaon]
Location in the cell
Cytoplasmic   Reliability : 1.939
 

Sequence

CDS
ATGCTGCTACTACAAGAAAATCAATGTACTGTGATAAACGATTTTAAACGAAACTGTAAATACATACAAAATAATATCGACGAGATAGTCGCTGGATGTGAACAGGACTTTAACCAGCGGCAAAACATAGTGGAGGCATCGGCTATCGCAGGCATGGGAATCAAAGTCATGATGAAAGCTTTCAATAAGCCAAAAGACATCCCATCGCAGGTGCCGCCACTGACCCCGGGCACCAACAAGAAGATGGCCGAGGCGCTGAAGGCCACCTTCGCCTCCTGGGAGAAGGAGCAGCTGCGCCTCGGCGTGCCAAAAGATCCAAGACAGTGGAGCGAAGCAGCAGTAACGGCGTGGCTGCGTTGGGCGGCTCGAGAGTTCTCATTAGAGGGTGTCGCCCTTCAACAGTTCGCGCGAGCTCAGGGCAAGGACATCTGTGCGATGGGCCGCGAGGAGTTCGTGGCCAGAGCGCCGGCATTCATGGGAGACATACTTTGGGAACATCTAGAGATCTTACAAAAAGACGTAGAAAAAGAAAGGTCGCTGCTCGCCAACGTGCCGCCCAACATGTACGAGAGCAACGTGTGCCTCCCAGAGCTGCCGGAGTACATCCCACCGCCGGCACACCACTACAACAACAACAACAATACGGCCCATGGACGTCCACTGCTGGACTTAGGCCTCCCCCAAGCCTCGCCACTAGGACCGGTCCTGCGCTGCCTGCATCCAGTGGATCCCCGCGAACCTCAATAG
Protein
MLLLQENQCTVINDFKRNCKYIQNNIDEIVAGCEQDFNQRQNIVEASAIAGMGIKVMMKAFNKPKDIPSQVPPLTPGTNKKMAEALKATFASWEKEQLRLGVPKDPRQWSEAAVTAWLRWAAREFSLEGVALQQFARAQGKDICAMGREEFVARAPAFMGDILWEHLEILQKDVEKERSLLANVPPNMYESNVCLPELPEYIPPPAHHYNNNNNTAHGRPLLDLGLPQASPLGPVLRCLHPVDPREPQ

Summary

Similarity
Belongs to the ETS family.
Pfam
PF02198   SAM_PNT        + More
PF00178   Ets
Interpro
IPR003118   Pointed_dom        + More
IPR013761   SAM/pointed_sf       
IPR000418   Ets_dom       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
SUPFAM
SSF47769   SSF47769        + More
SSF46785   SSF46785       
Gene 3D
PDB
2KMD     E-value=6.64744e-30,     Score=323

Ontologies

Topology

Subcellular location
Nucleus  
Length:
248
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00348
Exp number, first 60 AAs:
0.00317
Total prob of N-in:
0.03275
outside
1  -  248
 
 

Population Genetic Test Statistics

Pi
259.962205
Theta
184.12121
Tajima's D
1.26288
CLR
0.218336
CSRT
0.732963351832408
Interpretation
Uncertain
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