Silkworm Genome Informatics Database

Gene

KWMTBOMO15181

Pre Gene Modal

BGIBMGA004973

Annotation

Ets_transcription_factor_[Bombyx_mori]

Location

Bomo_Chr25(-):6172834-6192943 View in EpiBrowser

Transcription factor

ETS

Location in the cell

Nuclear Reliability : 2.147

CDS

ATGCTGCTGGTGGAGACACCACGCGAAGCCGCCGTGCCCCCGTGCGCGGCGCCCCTAGACCTCCCCATGTCGACGCTCACAAAACTAAACTTCACTGACTACAGTGTTAAAGTGAATAAAAACTACCCTGAGACCTCGGACCAGAGGGACAACAGACTGAATTACGAGCAGGCGCTCGCGAGCGTCGCTAGGCTTAATTATGAACTAGAGCAATCGGTGACTGGTTCGGGAAAGCTACACTATGCCGAGCAGAACAGATTGGCATACGATCCCGCAGTGGACACCATGTGCGCCGACCCTCCTTACCTTCTACAAGGAGGTTATACTACGGGCGGTCCTCGTGACACCAATGCATATGGTTACACGGAATCGAGCGGCGGCGCTGCACCCCCTCCCGCGCCCGCGGCCTCCTCCCCTTTAGACGAGTACTACCAGCCGGAGTATCCGCCGGCGCCCGCGCCCACAGCACAGCCCTACCTCGAGGAATATTACCACCACGCGCATGCGCACACGCAGCCTCTACTCACACACGAACCGAAGTACCAACCACATGCATATACGAAGCCGTATCCCAGAGGTGCCGGTGGAAGGTACGGTGAAGGTTACGGCGAGAGCTACACGCCAGAGTACGGCGGCGCATGCGCTGAGTGGAACGAGTGGCCCGCCGAGCAACACGCGCTCATACCGCAGGACAAGCTCCCCTACCCCGCCTCCGGACCTTGTTTTACTGGTTCAGGGCCTATACAGCTGTGGCAGTTCTTGCTTGAGCTTCTCACCGACAAGAACTGTCAGGGATTCATCTCCTGGACAGGAGACGGATGGGAATTCAAACTCACCGACCCGGATGAGGTGGCCAGACGCTGGGGCATCCGCAAGAACAAGCCCAAGATGAACTACGAGAAACTATCTCGAGGTCTCCGGTACTACTACGATAAGAACATCATCCACAAGACGGCCGGAAAACGATATGTCTACCGCTTCGTGTGCGATCTGCAAAGCCTGCTCGGAATATCTCCGGAGCAGCTTCACGCGATGTACGAACCCAAAATGGAGAAGAAAGACGACGATTGA

Protein

MLLVETPREAAVPPCAAPLDLPMSTLTKLNFTDYSVKVNKNYPETSDQRDNRLNYEQALASVARLNYELEQSVTGSGKLHYAEQNRLAYDPAVDTMCADPPYLLQGGYTTGGPRDTNAYGYTESSGGAAPPPAPAASSPLDEYYQPEYPPAPAPTAQPYLEEYYHHAHAHTQPLLTHEPKYQPHAYTKPYPRGAGGRYGEGYGESYTPEYGGACAEWNEWPAEQHALIPQDKLPYPASGPCFTGSGPIQLWQFLLELLTDKNCQGFISWTGDGWEFKLTDPDEVARRWGIRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGISPEQLHAMYEPKMEKKDDD

Similarity

Belongs to the ETS family.

Uniprot

A0A140KFU3 A0A212ENJ9 A0A2H1VRC5 A0A194PFY9 A0A194RL91 A0A0L7LRU1 + More
H9J633

Pubmed

22118469 26354079 26227816 19121390

EMBL

LC131459 BAU68220.1 AGBW02013634 OWR43068.1 ODYU01003808 SOQ43032.1 + More
KQ459604 KPI92301.1 KQ460045 KPJ18189.1 JTDY01000236 KOB78124.1 BABH01029926

Proteomes

UP000007151 UP000053268 UP000053240 UP000037510 UP000005204

PRIDE

H9J633

Pfam

PF00178 Ets

Interpro

IPR036388   WH-like_DNA-bd_sf        + More
IPR036390   WH_DNA-bd_sf
IPR000418   Ets_dom

SUPFAM

SSF46785 SSF46785

Gene 3D

1.10.10.10

ProteinModelPortal

A0A140KFU3 A0A212ENJ9 A0A2H1VRC5 A0A194PFY9 A0A194RL91 A0A0L7LRU1 + More
H9J633

PDB

6DAT E-value=9.35953e-54, Score=531

KEGG

101745606 K02678 C-ets-1 | (RefSeq) ETS-like protein pointed, isoform P2/D

GO

GO:0003700 GO:0005634 GO:0043565 GO:0006355 GO:0017183 GO:0006391 GO:0031167 GO:0003677 GO:0008408 GO:0005112 GO:0015930

Subcellular location

Nucleus

Length:

356

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00445

Exp number, first 60 AAs:

0.00114

Total prob of N-in:

0.00589

outside

1 - 356

Pi

322.666082

Theta

207.949027

Tajima's D

1.699992

CLR

0.086235

CSRT

0.832608369581521

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics