Gene

KWMTBOMO15180  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004975

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_39S_ribosomal_protein_L37?_mitochondrial_[Bombyx_mori]

Location

Bomo_Chr25(-):6161065-6165293      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.532

CDS

ATGAGACTTACGCAGGCATTAAAAAGACAACATATAGATTTTATGTTTAAAAAACATTGGCTAGTTCAAGGCAAAAGAATACCAATTGACACGGGCGTTGAAAAAAAATTGAAGGATATGGGTATTGAGGTTCAAGATGCTCTTGAATTCGTAAAAGAAAAACGGGAAGAACGCGAACACATACAAATTATAGGACCTTACGAACAACCGTTACCTTTAGACAAGAATCATCCAAATTATAAAGCGAAACCGTGTCTCACGCTAAACCAAGACAACGTCCTTCTTGAAGGTTTATCGCAAGCGCAGGTCCTAACTAAAACTATAATAGCTCAAGACAAACTTCCTCCAAAAATCGAAGAACTATCACGACTACCAGCTCCGGCTGCTATTCACGAAAACGTAAAAAAAGCCATATTAACAGCTAATGTCTTTGATTGTGAGCAGAAAAAATTACCGAAAATCAAAGACCCACAGCGACCAGCTTATAATTTTCGTCGAATACTGGGCATCACTGATAGCAGACGAAACCAAATATTAACTAACAAATTACTACAACTTGTTGAGAAAACCAGTGATAGAGAAGTGACCCAAAACAAATATGTTGTAAATGATGTTGAATGTACAACAATATTTGAGAAAGAAGATGACCTTTTACAGTTCCAGGATGTATCAAACATACTAGTTACAAGCGCTAAACCTGTTCAACATGAAGTTGAGAAAGACATACCTTTTGTTGAAATACCAAGCTTGTACCCTGTAAAACATACTATCACCATGCCACATAATCATTTTTACAATAATACCAGCCAGTATCCTTTTAAACAAAAGGTTCAAGTAAAGCATCCTCATACAACATGGTTACATTTTAACAGGACTGAAGTGAAAAACATATATGGGGAACCAGTCACGCAGAATCAGATCTTAGGTCGATCTCTTACTCATGCATTCAATGTGGCCAGCTCTTATGCAAAACAAATGCATGGGGAGGATGTCAAAGACCTGCCAGAGCCGATATTCGTCAATTGTATTCAAACGGATGGACAACTATATCATTTCGGAGTATTACAACTTAACACTTTGAATGTTGATGGTAATGAAGGCATAAAAAATGTATGGTACTGCAAAAACAACATGAAACTCTATGATTCAAGCAGATACTTTAGTGGCATGCCGGTCCTCGAAAATTATAACAACAAAGTCTATGGATATATAAATGCGTTTTATAATAGTTAA

Protein

MRLTQALKRQHIDFMFKKHWLVQGKRIPIDTGVEKKLKDMGIEVQDALEFVKEKREEREHIQIIGPYEQPLPLDKNHPNYKAKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKAILTANVFDCEQKKLPKIKDPQRPAYNFRRILGITDSRRNQILTNKLLQLVEKTSDREVTQNKYVVNDVECTTIFEKEDDLLQFQDVSNILVTSAKPVQHEVEKDIPFVEIPSLYPVKHTITMPHNHFYNNTSQYPFKQKVQVKHPHTTWLHFNRTEVKNIYGEPVTQNQILGRSLTHAFNVASSYAKQMHGEDVKDLPEPIFVNCIQTDGQLYHFGVLQLNTLNVDGNEGIKNVWYCKNNMKLYDSSRYFSGMPVLENYNNKVYGYINAFYNS

Uniprot

A0A2A4K7P9   A0A1E1WE97   A0A0L7LRP7   A0A212ENL2   A0A194RLJ7   A0A194PMF9   + More
A0A1E1W969   A0A1Y1LLQ6   Q9VGW9   A0A0K8TNY9   B3DNM7   A0A2J7RC89   A0A1S4F2R2   A0A1A9WPS2   A0A0P8XY51   A0A1A9ZK52   A0A182GD50   Q17H25   A0A023ERX1   A0A067QEA0   A0A1W4VMA4   A0A0R1E2B2   D3TPC7   A0A1B0GGG0   D6WP57   A0A0L0BSG0   A0A0Q9W0D4   A0A1A9UX35   B0WNH5   U5EPB1   B4KCA1   A0A1I8JW59   A0A1I8JTL6   A0A2M4BQH2   A0A1Y9IS03   Q7QC15   A0A182LRA0   A0A2M4BPT8   W5J6S9   K7IQR4   A0A182KCU3   A0A1I8JSR5   A0A1I8P150   A0A182TSW7   A0A0M4EPP9   A0A0Q9X495   A0A232EWJ1   A0A2M4ASS6   A0A1B0F939   A0A1B0BXN4   A0A3B0KBZ5   A0A182LZI1   A0A182JCR3   A0A158NLK9   A0A0J7NT00   E9IZ69   A0A182PA70   A0A0A1WII8   A0A1B6DL06   A0A084W1Q3   A0A0P4VYU3   A0A1Q3F8U4   A0A195F1V5   B4JHM6   B4QUP8   A0A182R3M6   T1HXI1   A0A069DYX5   A0A182VX66   B4HIQ3   A0A336KZI8   N6UMX6   W8CD51   A0A182YKH1   A0A2M3ZC72   A0A182NA95   J3JXX0   B3P1K3   A0A195CY73   A0A195E6H5   A0A151XCE8   E2ATA1   I5AP51   A0A195B1T2   E2C0C1   A0A182QBX1   A0A026WIE1   A0A0V0G8M0   A0A088AHE4   A0A2M4CM19   A0A2A3E2E1   F4X6L6   A0A0K8VRF3   A0A1J1J4U5   A0A1B6G2X7   A0A1B0CDQ7   B4GE04  

Pubmed

26227816    22118469    26354079    28004739    10731132    12537568    + More
12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26369729    17994087    26483478    17510324    24945155    24845553    17550304    20353571    18362917    19820115    26108605    12364791    14747013    17210077    20966253    20920257    23761445    20075255    28648823    21347285    21282665    25830018    24438588    27129103    26334808    23537049    24495485    25244985    22516182    20798317    15632085    24508170    30249741    21719571   

EMBL

NWSH01000091    PCG79680.1    GDQN01005807    JAT85247.1    JTDY01000236    KOB78122.1    + More
AGBW02013634    OWR43069.1    KQ460045    KPJ18190.1    KQ459604    KPI92300.1    GDQN01007587    JAT83467.1    GEZM01052106    JAV74604.1    AE014297    BT030992    AAF54554.3    ABV82374.1    GDAI01002003    JAI15600.1    BT033015    ACD99579.1    NEVH01005885    PNF38453.1    CH902617    KPU79639.1    JXUM01055150    KQ561853    KXJ77324.1    CH477253    EAT45988.1    GAPW01001643    JAC11955.1    KK853897    KDQ71517.1    CM000160    KRK03400.1    EZ423279    ADD19555.1    CCAG010019255    KQ971352    EFA07281.1    JRES01001539    KNC22169.1    CH940652    KRF78588.1    DS232010    EDS31629.1    GANO01003754    JAB56117.1    CH933806    EDW13710.2    APCN01000420    GGFJ01005877    MBW55018.1    AAAB01008859    EAA08056.5    GGFJ01005881    MBW55022.1    ADMH02002130    ETN58565.1    CP012526    ALC46851.1    CH964272    KRF99937.1    NNAY01001854    OXU22718.1    GGFK01010524    MBW43845.1    JXJN01022279    OUUW01000007    SPP83216.1    AXCM01000752    ADTU01019320    LBMM01001916    KMQ95550.1    GL767119    EFZ14110.1    GBXI01015595    JAC98696.1    GEDC01010935    JAS26363.1    ATLV01019404    KE525269    KFB44147.1    GDKW01000809    JAI55786.1    GFDL01011050    JAV23995.1    KQ981864    KYN34361.1    CH916369    EDV93865.1    CM000364    EDX13455.1    ACPB03015499    GBGD01001630    JAC87259.1    CH480815    EDW42700.1    UFQS01001116    UFQT01001116    SSX09063.1    SSX28974.1    APGK01025935    KB740605    KB632095    ENN80062.1    ERL88734.1    GAMC01002556    JAC04000.1    GGFM01005393    MBW26144.1    BT128092    AEE63053.1    CH954181    EDV49602.1    KQ977115    KYN05603.1    KQ979568    KYN20778.1    KQ982314    KYQ58017.1    GL442545    EFN63346.1    CM000070    EIM52736.1    KQ976662    KYM78433.1    GL451770    EFN78580.1    AXCN02000218    KK107185    QOIP01000012    EZA55817.1    RLU15908.1    GECL01001641    JAP04483.1    GGFL01002151    MBW66329.1    KZ288478    PBC25271.1    GL888818    EGI57798.1    GDHF01011164    JAI41150.1    CVRI01000070    CRL07427.1    GECZ01012995    JAS56774.1    AJWK01008138    CH479182    EDW33839.1   

Proteomes

UP000218220    UP000037510    UP000007151    UP000053240    UP000053268    UP000000803    + More
UP000235965    UP000091820    UP000007801    UP000092445    UP000069940    UP000249989    UP000008820    UP000027135    UP000192221    UP000002282    UP000092444    UP000007266    UP000037069    UP000008792    UP000078200    UP000002320    UP000009192    UP000076407    UP000075840    UP000075903    UP000007062    UP000075882    UP000000673    UP000002358    UP000075881    UP000069272    UP000095300    UP000075902    UP000092553    UP000007798    UP000215335    UP000092443    UP000092460    UP000268350    UP000075883    UP000075880    UP000005205    UP000036403    UP000075885    UP000030765    UP000078541    UP000001070    UP000000304    UP000075900    UP000015103    UP000075920    UP000001292    UP000019118    UP000030742    UP000076408    UP000075884    UP000008711    UP000078542    UP000078492    UP000075809    UP000000311    UP000001819    UP000078540    UP000008237    UP000075886    UP000053097    UP000279307    UP000005203    UP000242457    UP000007755    UP000183832    UP000092461    UP000008744   

PRIDE

Q9VGW9    B3DNM7   

Pfam

PF07147   PDCD9

Interpro

IPR010793   Ribosomal_L37/S30       

ProteinModelPortal

A0A2A4K7P9   A0A1E1WE97   A0A0L7LRP7   A0A212ENL2   A0A194RLJ7   A0A194PMF9   + More
A0A1E1W969   A0A1Y1LLQ6   Q9VGW9   A0A0K8TNY9   B3DNM7   A0A2J7RC89   A0A1S4F2R2   A0A1A9WPS2   A0A0P8XY51   A0A1A9ZK52   A0A182GD50   Q17H25   A0A023ERX1   A0A067QEA0   A0A1W4VMA4   A0A0R1E2B2   D3TPC7   A0A1B0GGG0   D6WP57   A0A0L0BSG0   A0A0Q9W0D4   A0A1A9UX35   B0WNH5   U5EPB1   B4KCA1   A0A1I8JW59   A0A1I8JTL6   A0A2M4BQH2   A0A1Y9IS03   Q7QC15   A0A182LRA0   A0A2M4BPT8   W5J6S9   K7IQR4   A0A182KCU3   A0A1I8JSR5   A0A1I8P150   A0A182TSW7   A0A0M4EPP9   A0A0Q9X495   A0A232EWJ1   A0A2M4ASS6   A0A1B0F939   A0A1B0BXN4   A0A3B0KBZ5   A0A182LZI1   A0A182JCR3   A0A158NLK9   A0A0J7NT00   E9IZ69   A0A182PA70   A0A0A1WII8   A0A1B6DL06   A0A084W1Q3   A0A0P4VYU3   A0A1Q3F8U4   A0A195F1V5   B4JHM6   B4QUP8   A0A182R3M6   T1HXI1   A0A069DYX5   A0A182VX66   B4HIQ3   A0A336KZI8   N6UMX6   W8CD51   A0A182YKH1   A0A2M3ZC72   A0A182NA95   J3JXX0   B3P1K3   A0A195CY73   A0A195E6H5   A0A151XCE8   E2ATA1   I5AP51   A0A195B1T2   E2C0C1   A0A182QBX1   A0A026WIE1   A0A0V0G8M0   A0A088AHE4   A0A2M4CM19   A0A2A3E2E1   F4X6L6   A0A0K8VRF3   A0A1J1J4U5   A0A1B6G2X7   A0A1B0CDQ7   B4GE04  

PDB

5OOM     E-value=2.19849e-20,     Score=244

KEGG

101744358    K17418 large subunit ribosomal protein L37 | (RefSeq) 39S ribosomal protein L37, mitochondrial

GO

GO:0005840   GO:0003735   GO:0005739   GO:0006412   GO:0032543   GO:0005762  

Length:

410

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00257

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02749

outside

1  -  410

 

 

Pi

241.506443

Theta

169.590065

Tajima's D

1.043031

CLR

11.456784

CSRT

0.672516374181291

Interpretation

Uncertain