Silkworm Genome Informatics Database

Gene

KWMTBOMO15178

Pre Gene Modal

BGIBMGA004976

Annotation

PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]

Location

Bomo_Chr25(-):6133425-6150133 View in EpiBrowser

Transcription factor

ARID

Location in the cell

Nuclear Reliability : 4.029

CDS

ATGCAGGGTGATGATCCACCCTACTTGCCAGTGGGGACTGATGTTAGTGCAAAATACAAGGGTGCATTCTGTGAGGCTAAAATAAAAAAAGTTGTAAGGAATATTAAATGCAAAGTTACACTTAAAGCTGGTGGAGGAACAATTACTGTGAATGATGATGTAATAAAAGGTACATTGAGGATTGGAAGTACTGTAGAAGTGAAACAGGATCCGAAAAAAGATGCAATGGAAGCTGTCATTACTAAAATACAGGATTGCAGTCAATATACTGTTGTGTTTGATGATGGTGACATCACAACATTGAGGCGATCAGCGCTTTGCCTGAAGAGTGGAAGGCATTTCAATGAAAGCGAGACTTTAGATCAATTGCCATTGACACACCCTGAACACTTTTCTACCCCAGTCATAGCAGGACGACGTGGCAGAAGAGGACGCGCCCAGTCAGATGATAGTGAAGGCGAAGGTACGAGTCGTCCCGTGAAGGCGGACAGTGCCGAGCGCGAACCGCACGTGGGTCGCGTGGTGCTCGTGGAGGCGGCCAGTGGCGCGGAGAGGCGCCGACCGCACCAGCCCGCCTTCCCAGCGCTGGTCGTGGCGCCCACGGCACAGATCAAGGTCAAGGAGGATTATTTAGTACGCTCCTTCAAAGATGGACGATATTACACAGTACCCAAAAAAGAAGCACGCGAGTTCCGTAAGGGCAGCGCACCGCTGGAATGGGCAGGAGTTGAAGCCGCTCTGCAATATTTGAACCAAGGTGTGCTACCTCCGCACTGGGATCGAGACACGCTCTTCAACGAACCCCGAAATACTTCTGATGATAGTTCCGATGATGAACCAAGAGAAGAAAAAGATCATTTCGTGGCTCAACTGTATAAGTTTATGGATGACCGTGGCACACCGCTCAATCGGAATCCGACTATAGCCAACAAAGATATTGATTTATATAGACTATTTCGGGTCGTTCAAAAACTAGGAGGCTACAACAGGGTCACTAATCAAAATCAATGGAAAACTATTGCTGACAAAATGGGCTTTCATCCGGTGACGAATAGTATAACGAATCTCTGCAAACAGGCATATAAAAAATTCCTGCACAGCTTCGAAGATTTCTACCGAAAGCTGGGAGTGACGTTAGTGGCGCACCCGCGCGGCGCACGCACTCCGCCCGCCGGTAGATCTCTCATACGAGACAAAGATAAGCAGCCCCTCACTTCGTCCTCCGCTTCAAGCACACCGACAGGCACTCCCAGTCAGCGCGGAAAAGACAAAGATTCTGACAAGAGCGAGACGGACAAAAGTGAAAAGAGCGAGAAAGAAGAAAAAACAGAGAAAACGAAAGAAAAACCTCGGGCCAGCGACGAAGAGGACAGCGCCGACAATCAACCGCTCGTAGTTGCCGTGGCTCCAAAGATCGAAAAGGATAAAGAAAAAGATAAAGAGAAGGAAAAAGAAAAGGATAAAGAGAAAGAAAAGGAAAAAGAGAGAGAAAAAGAGAAAGAAAAGGAAAGAGAAAAAGAGAAGGAGAAAGAAAAGGAAAAGGAGAAAGAGAAAGAGAAAGAAAGAGAAAAAGAAAAGGAGAAAGAGATAGAGAAAGAGAAAGAAGATAGGAAAGAAAAAGAAAAAGTGAAAGATAAAGAGAAAGAGAAAGAAAAGGAAAAGGAAAAAGATAAAGAACGTGAAAAATCAACGTCGACTACCACGAGCGAAGAGAAAGTGCTAGTGAAACCACGTTCGCAGTCTAAAGGACGTTCCTCGATGCCGCCTTCTAAACCAGACTCTCACGACAAGCGGACACCGAAGAGACGCCCACTATCCTCGAAAAGCGAGAGCGCAGGCTCAAGCACTTCGAGAGCCTCACGCCGACCTCACGTCTCAACGGACAGTGATAGCTCCGGCCGTGCTTCTAGGCCATCCACTAATGAGCCGATGCATACGCGCGTGTCGAACGTGAAAGCTCAAGTCGGTGACAAACTGAAAGTTTATTATGGACCCACACAGTCTGAATCTAAGGTCACGTACGAGGCTAAGGTAATAGAAATTTCGTCTGAGGGTATGTTGAGAGTACACTATACCGGCTGGAACACTCGCTACGACGAGTGGATCAAACCGCAGAGGATTGCACTCAACGTTACACAGCACGAACAGCGCAACAAAAAGGGTACCGGGATGAGTAGACGTGTCCGTGCTAAGATGAATGAAGAGTCATCAGCTCGGTCTGATTCCGACAGTGACTCGGATAGCGACGTCGATCTGAAGAGACCACCAAAAAAACTGGATGAAAAAGGCCCGCCTTCTAAAATTTTACCACGACCGAAAGAAGCAAAGACGGGTGAGAGCAGTGGCTCAAATAAACCACGCAAGAGACCCGTACGTACAGTCTCTACGCCGACTAATCTTTCTCCAAGCAAGAAACCACGACCGATGCCCACCACTTGCCATCAGGGACGAGACTTCGATCTGAACGAAATCAGATCGGAGCTAAAAGGACTACATTCAGTCAAACAGGACCACGATGAATCATCATTGAAACAAGATCCACATGACAAAACATCTAGGCTCATGCTTCCGGCAGCTACGATGTCGGCCGCCCCCGCGGAACCCCCGCAACCCGATAAACAAGCCGAGGACGTGTACGAGTTCAAAGAACCAGAACCATTCGAACTGGAGCTGCACGACGAAAAGAAAAAAAGGACTCATCGAATATTCGACGATATTTCCCCCAGTAAATACACATCAACGTTATCGAAATCGTTGAGTGAAGAAATCTCCGAAGATCCCTTAAGACCGCGTCCTTCGACTTTAAGATCACCCTCGCTGTCGCCGTTCAGAGATTTCGGAGGGACTCGTGCTCTCGAGCCAGGTAGACAAAGTCCCGAAGAAGACCCTAAAGTATGTCTATTCGGTTTGGACGACGACTCATTCCAAGGCGATGGCAGTTCGGGCCCCACTTTCGAAGGGTTCACTCCTGCTAAAAATCAAGAGACTTACTCTAAGAAGAGTAAAGTGTCTAAGTTAAGAGAACTCATCGACGATTCGCCGGAAAGTCCGGCTGATGACGAACATTCTTCAGAGGATGAGCAAGACTTGATGGTAAAAGGCGAAAAAGCGGTAAGTGAACCAAGCCCTGCTGCTCCCCAAGTGGAAACTGAGAAAATAACGGAAAACGTTAAAGAATGTGTCGCTTCAAAGGAATTAGTGACACAAATAATACTGGAACCAATAATTGAAACGAATACAGAAACTAAATACGTTACAGAAGAAGCCGTAAAGCAAAAAGAAGTACCGATGGAGATAATCATAGCGCCCGAACGCCCAAAAACACCGCCACAGCAAAGAAAAGAAATACATAAAGTTAACCTACTCTCCGTCCCCGTATCCATTTCTAATGTCCAAATGAATGTGACGCTTACTGTTGCTAATCCTGTTCTGAAACAAGAACCGGTCAAAGAATCGTCACTTAAATTGCTTACGGTTCCAAAAATAGTAACGGAACCTAAAGAAAACATTCCGCAAATGAAGATTGAACAAAACATGGACCCAGAACCTGTAGTTTCGAAGTTTGAACCTCCCTCGAGCCCTCTGATTGACACAGAAGAAGATAAGTCGGAACCCGACAGTCCGGCGAGAATTGATGTCATCCCCGAACCGCCCCCTGGATTCTTATTACAGTCCGAGGGACCGAAGATAGCGGAGAAATTGCTTAAAGCCATCAACAGTGCCAAGAGGCTCTCGATGTCCCCGCCACCCACGGACGATAGATCGGATGCGTCCAAAACGGAACCCAATAAATTTAACAAACCCGAGATAAAAGTTTCTTCCCAATCACCAGAACTGAAAACGATCTCATCAAAATCTGACACGGTCAAGCCGTTAGTTAAGTCGGAACTCAAGAAAGTCCGAACTCCAGAAATCAGCGAGTGTATATTCGGCGAGCCGTCGAACTTAACGGATGCGAAGCGAGACGCGACCGACGTTAAGAAAGTTAGACCCAAAGACGAAATCAGGAAAGAGGTTTTATCTCCACGCTTACAGAGCCCATTAAACATACTTGAGCGGCGGCGTAGTGTTGCCGACTTACCATTAGCAGTGCCCGCTCAGAAGAACAATAAAGTTCTCAGCGACACGATACAAAAGTTGTCGAGCCAGATCAACCAGTCGGCGGCCGCTGCCGTCCCCTTGCCGCTGCCACCGTTCCCGCAAGCCGACAGGAGCGAATCCAGCGATTCCGACGATTCCGATCGGAGGTTAATAATCGACAAAGTGGAAGAGTGGGGCGGCAACAGTTGCGAGACGTCGCGGGCGAGCGGTGCGGCCGCCCTGGCGAGCCTACACGCCGGGAAGTCGGCCGGCGAGTGGAGCGCCGGAGAGTCCCTGCTCATGCTCGAAGACGCTTGCAAGAACGAAAGGAAGCATAGTATGTTTCACGCTCTTACTTATAACGCAACTAAATATTAA

Protein

MQGDDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGSTVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSDDSEGEGTSRPVKADSAEREPHVGRVVLVEAASGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPLEWAGVEAALQYLNQGVLPPHWDRDTLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANKDIDLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTNSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDKDKQPLTSSSASSTPTGTPSQRGKDKDSDKSETDKSEKSEKEEKTEKTKEKPRASDEEDSADNQPLVVAVAPKIEKDKEKDKEKEKEKDKEKEKEKEREKEKEKEREKEKEKEKEKEKEKEKEREKEKEKEIEKEKEDRKEKEKVKDKEKEKEKEKEKDKEREKSTSTTTSEEKVLVKPRSQSKGRSSMPPSKPDSHDKRTPKRRPLSSKSESAGSSTSRASRRPHVSTDSDSSGRASRPSTNEPMHTRVSNVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISSEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEQRNKKGTGMSRRVRAKMNEESSARSDSDSDSDSDVDLKRPPKKLDEKGPPSKILPRPKEAKTGESSGSNKPRKRPVRTVSTPTNLSPSKKPRPMPTTCHQGRDFDLNEIRSELKGLHSVKQDHDESSLKQDPHDKTSRLMLPAATMSAAPAEPPQPDKQAEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLRPRPSTLRSPSLSPFRDFGGTRALEPGRQSPEEDPKVCLFGLDDDSFQGDGSSGPTFEGFTPAKNQETYSKKSKVSKLRELIDDSPESPADDEHSSEDEQDLMVKGEKAVSEPSPAAPQVETEKITENVKECVASKELVTQIILEPIIETNTETKYVTEEAVKQKEVPMEIIIAPERPKTPPQQRKEIHKVNLLSVPVSISNVQMNVTLTVANPVLKQEPVKESSLKLLTVPKIVTEPKENIPQMKIEQNMDPEPVVSKFEPPSSPLIDTEEDKSEPDSPARIDVIPEPPPGFLLQSEGPKIAEKLLKAINSAKRLSMSPPPTDDRSDASKTEPNKFNKPEIKVSSQSPELKTISSKSDTVKPLVKSELKKVRTPEISECIFGEPSNLTDAKRDATDVKKVRPKDEIRKEVLSPRLQSPLNILERRRSVADLPLAVPAQKNNKVLSDTIQKLSSQINQSAAAAVPLPLPPFPQADRSESSDSDDSDRRLIIDKVEEWGGNSCETSRASGAAALASLHAGKSAGEWSAGESLLMLEDACKNERKHSMFHALTYNATKY

Uniprot

NA

ProteinModelPortal

NA

PDB

2MAM E-value=3.06145e-30, Score=334

KEGG

101744501 K07874 Ras-related protein Rab-1A | (RefSeq) AT-rich interactive domain-containing protein 4B

GO

GO:0003677 GO:0006396 GO:0004164 GO:0017183 GO:0006391 GO:0031167 GO:0008408 GO:0005112 GO:0015930

Length:

1485

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1 - 1485

Pi

279.753657

Theta

179.114742

Tajima's D

1.30316

CLR

0.020087

CSRT

0.741462926853657

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics