Gene

KWMTBOMO15172

Pre Gene Modal

BGIBMGA004937

Annotation

scaffold_protein_salvador_[Bombyx_mori]

Location

Bomo_Chr25(+):6091504-6097958      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.278

CDS

ATGATATCACGAAAAGGTCAAAAAGCTGTAAACGAAGGCGTAGTTGGCAAATACATAAAAAAAGATACACCGTCAGGTTTGCCGATAATAAATGTCTGGACAACAGAATATAACAAAAGACCTCGCAGTCAACCTTTTGGTGTCAACGATGGGATTTCACAGAACCATGAAAATAAGTTTGGTAAAGCTCAAACGATGAGCGGCCACGCCGGAAAATATACGCCTAGTGAATCGGTTCCTAATTTAACGAATAGGTTTGCTAGTTTTTCAACGAGTGAAACACCAAGCACTGCAAATAATTACAACTCACAATATCATCTGGACACAAATGTGGCATCACAATCAGTATTGAATGACATTGATGAGTCATTCAGTAGACAGACCAGTTACAGATACTACCGGCATCAGCAGGAAGATCCTATATATCAAAATCAACAACAGGTTCAACAGCAAAAACAACAGTATGGTTCAAGAGAGTCAAGCATTCCTCGGTTATCATCAAACATGAGTTTGACTCCTAGACTACATCCACCATCTCCTCATTCTATTCGCTTACACAACTGTACTGAAGCTTTCACAACAGCGAGTCAGTCTTCACCCATTTATTCAAATTACGTTAATACATCTGCTCTCTCGTACCATAACAAGAATCATGGCAGCAGCATCATATCCAGTAATCAAGGTTCAGACGAGTGTGACCTGCCGTTGCCGCCGGGATGGTCGGCGGACCGGACTCTGCGAGGTCGCCGCTACTACATGGACCACAACACGCAGACGACGCACTGGACGCATCCGCTCGAGAGCGTGCCGCGGCCGTGGCAGAGAGTCTCCACGCCACACCATGGTGTTTATTATTTCAATGAAATAACAAACCAAACAACTTATGCGCACCCGTGTCTAGTGGGAGGCTGCTATTTAGTGAGTCCGTATGTTCCGACGCTCGTCCCGCCCTACTTGCTTGAAGAGATACCACATTGGTTAATTGTTTATTCTAAAGCCGATCAAGAGTTGGACCATAAGTTGCGTTGGGACATGTTCCGTCTCAGCGAATTGGACTGTTACTCGGACATGTTGACTCGCCTGTACAAACAAGAATTGCAACTAATCGTAATGAAATACGAACGATATCGATCAGCGTTACTGCAAGAAATTGAGAGAAGAAGGCATGGCGGTCGATCGATCGCTTACCGTCCACAACATGCGAATTGA

Protein

MISRKGQKAVNEGVVGKYIKKDTPSGLPIINVWTTEYNKRPRSQPFGVNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETPSTANNYNSQYHLDTNVASQSVLNDIDESFSRQTSYRYYRHQQEDPIYQNQQQVQQQKQQYGSRESSIPRLSSNMSLTPRLHPPSPHSIRLHNCTEAFTTASQSSPIYSNYVNTSALSYHNKNHGSSIISSNQGSDECDLPLPPGWSADRTLRGRRYYMDHNTQTTHWTHPLESVPRPWQRVSTPHHGVYYFNEITNQTTYAHPCLVGGCYLVSPYVPTLVPPYLLEEIPHWLIVYSKADQELDHKLRWDMFRLSELDCYSDMLTRLYKQELQLIVMKYERYRSALLQEIERRRHGGRSIAYRPQHAN

Uniprot

W6FHM5   A0A2A4JMJ0   A0A3S2NAI5   A0A2A4JLF0   S4PWG5   A0A212ENM4   + More
A0A194PGX3   A0A194RK38   A0A2H1WYP9   D6WT02   A0A1Y1MUY6   A0A1W4X6I4   A0A1B6E1Y0   A0A1B6IVC9   A0A1B6K8H7   A0A2S2R7Z0   A0A1B6EGB0   A0A067RK51   U4TTN4   X1WJG0   A0A026WUV6   A0A195BH64   A0A158NL59   F4WFV8   A0A195F1U5   E0VD60   A0A151JSE7   E9IF99   A0A151WHE5   A0A3L8D851   A0A195C028   E2AI02   K7IQK6  

Pubmed

23622113    22118469    26354079    18362917    19820115    28004739    + More
24845553    23537049    24508170    21347285    21719571    20566863    21282665    30249741    20798317    20075255   

EMBL

KF904337    AHJ26000.1    NWSH01001069    PCG72804.1    RSAL01000329    RVE42499.1    + More
PCG72801.1    GAIX01006828    JAA85732.1    AGBW02013634    OWR43076.1    KQ459604    KPI92293.1    KQ460045    KPJ18198.1    ODYU01012080    SOQ58189.1    KQ971352    EFA06324.2    GEZM01026168    GEZM01026167    JAV87187.1    GEDC01005389    JAS31909.1    GECU01016815    JAS90891.1    GEBQ01032220    JAT07757.1    GGMS01016840    MBY86043.1    GEDC01000343    JAS36955.1    KK852425    KDR24167.1    KB631632    ERL84874.1    ABLF02036122    KK107111    EZA58889.1    KQ976488    KYM83511.1    ADTU01019261    ADTU01019262    GL888128    EGI66725.1    KQ981866    KYN34069.1    DS235072    EEB11316.1    KQ978530    KYN30308.1    GL762798    EFZ20757.1    KQ983120    KYQ47263.1    QOIP01000011    RLU16451.1    KQ978501    KYM93526.1    GL439621    EFN66910.1   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053268    UP000053240    UP000007266    + More
UP000192223    UP000027135    UP000030742    UP000007819    UP000053097    UP000078540    UP000005205    UP000007755    UP000078541    UP000009046    UP000078492    UP000075809    UP000279307    UP000078542    UP000000311    UP000002358   

PRIDE

W6FHM5   

Pfam

PF00397   WW

Interpro

IPR011524   SARAH_dom        + More
IPR001202   WW_dom       
IPR036020   WW_dom_sf       

SUPFAM

SSF51045   SSF51045       

CDD

cd00201  WW

ProteinModelPortal

W6FHM5   A0A2A4JMJ0   A0A3S2NAI5   A0A2A4JLF0   S4PWG5   A0A212ENM4   + More
A0A194PGX3   A0A194RK38   A0A2H1WYP9   D6WT02   A0A1Y1MUY6   A0A1W4X6I4   A0A1B6E1Y0   A0A1B6IVC9   A0A1B6K8H7   A0A2S2R7Z0   A0A1B6EGB0   A0A067RK51   U4TTN4   X1WJG0   A0A026WUV6   A0A195BH64   A0A158NL59   F4WFV8   A0A195F1U5   E0VD60   A0A151JSE7   E9IF99   A0A151WHE5   A0A3L8D851   A0A195C028   E2AI02   K7IQK6  

PDB

6BN1     E-value=2.14277e-15,     Score=201

KEGG

101746559    K16686 scaffold protein salvador | (RefSeq) SAV; scaffold protein salvador

PATHWAY

04214    Apoptosis - fly - Bombyx mori (domestic silkworm)
04391    Hippo signaling pathway - fly - Bombyx mori (domestic silkworm)
04392    Hippo signaling pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0042127   GO:0035329   GO:0006915   GO:0005515   GO:0007165   GO:0004164   GO:0017183   GO:0006391   GO:0031167   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

Length:

402

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10414

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.03368

outside

1  -  402

 

 

Pi

303.356669

Theta

204.78867

Tajima's D

1.599621

CLR

0.027903

CSRT

0.810509474526274

Interpretation

Uncertain