SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15170
Pre Gene Modal
BGIBMGA004936
Annotation
hypothetical_protein_KGM_17399_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 4.179
 

Sequence

CDS
ATGTTGAGAGGTGGGCGTGGAGGCCGTCACAGTCCGGAGCTGTACCCCCACACACTAAAGTGCTCCAACGCTAGTGATACTAGCTCCGCATACAGTGGCAGTGACACTATGACTTCAGTACATAGCTCCCTTGATATGGATATGGAGGTTGATCTTTCTGGCCTCCTCGAGTCTATTGTTGATTCTGATGAGGAAGAAGATATGGAAGAGGAAATCCTTATAGTAAGAGATGCAGTGCGTGAATGTCTGGAAAAAGATCCAAGTGAAAGAACTGATGATGATATTGAGACTTTGTTGGAATTTACTCGACACTTAACAGCATTTACTAATATGACTCTTACTGTAAGGCGTGCTCTTTGTGCTGTAATGGTATTTGCTGTTGTGGAGAAAGCTGGTACTGTTGTAATGAATGATGGAGAAGAACATGATTCATGGTCAGTACTCATTAATGGTCATGTAGGTATTGAGCATGCCAATGGAGAAATTGAACATCTTAATATTGGGGACAGCTTTGGAATGGCAGAGGCTACTCTGGAAAAGTTATACCATCGGGGTGTAATGACAACCAGGTGTGATGACTGTCAGTTTGTTTGTGTAACACAAACTGATTATTACCGTATACTGCATCAAGGAGAAGAGAATATCAGGAGACATGAGAATGACAATGGGGTTGTAGTCTTAGTAACTGAGTATAGAGGAGTAGCAGATTTTGAAACAGATCCGAATATGATGGAGTTTCTTGAAAATTTTGAAATTTCACTAGAGCGAGAAAATATGGAAAGCCAGCTGAGACTTTTGAATATAGCTTGTTCTGCAAAGGCTCGTACCAGGAGTGTCACATTATCTCGTCCATCTAGGGATGAACCCTTATATTTTACTATTTTGGGTGGTTATGAGAGAGGTTATGGTATATTTATTTTTAAAGTTGAAAAACACTCTAAAGCAGAGGATGTAGGATTTAAAAGAGGAGACCAAATTTTGGAAGTAAATGGGCAATCATTCCAGCATGTCAGTCATGCTAAAGCAATGGAAATTATAACAGGATCAACACATCTGAGCATCACAGTTAAAAGTAATTTACTAGCCTTTAAACAAATGTTGTCTATGCCTGAAAATTCTCCAAGACAACGAGGTGGTGCAAATATAGTAAGATGGCAGACAGATCCTAGAGCACGTCTTTCAACTGCTGAGCTGCTCACTGATGATCCAATAACTCTGACGCCTAGTTTCTCATCACCAACAAAAAAGCCTCAACAGAACAGTACTAAAAAAGAAACTCAAAAAAATTTCATGACCCTTGGTCCCAAAAGAAAACTGCAAAAAGCGTTAATGAAAATGAACCTTCTTCCTAAAAATACAATAAGTGATGGCCTGCATACTGATGACAGTGTACTATCTAATACTGAGTCACTAAATAGGGCCAACACCAGCACATCATTCTATAGTTCCCATAGTAACCCTGACCTAATATCCATTTGTTATGATGAATACCACTCCTCAGATTATCCAGAACATGTACTCAAAGTATATAGACCTGATCAAACCTGTAAATATCTTTTAGTTCATAAGGAAACAACAGCCAGAGAAGTAGTAATGTTATCAGTAAAAGAATTTGGTATCTCTGATCCTAGTTCCAACTTTTCCTTGTGTGAAGTATCTGTTGCGCAAGGCGGAATTATCAAGCAACACCGCTTACCTGATCAACTCCAGAATCTTGCTGAACGTATCGGTTTGAGTTCAAGATATTATTTAAAAACAAATGGCATAAGTGAAACACTAGTTCCAGATGATATGGCTCCAGAGCTTTTGCGTGAAAGTGTGGTGCATTTTTTGCAGTTGAATGCAGTTGAAGTTGCTGTACAGTTAACTTTACAAGATTTCTGCATTTTTAGACAAATAGAGAGTACTGAATATGTTGATGATCTGTTTGAACTGAAGAGTAGATATGGTACTCCAATGTTATCACAATTTGCAGAACTTGTAAATAAAGAGATGTTTTGGGTGGTAACTGAGGTTGTCAATGAACAAAATCTTGTCCGTAGATCCAAAATAATAAAACAATTTATTAAAGTTGCGAGACATTGCAAAGAATGTAAGAATTTTAATTCCATGTTTGCTATCATATCAGGATTAGGTCATGGAGCAGTATCTAGATTGAGAATGACTTGGGAAAAATTGCCTACAAAGTATTACAAATTGTTTACTGATCTACAAATGTTGATGGATCCTTCAAGAAATATGTCAAAATATAGGCAGTTGGTTACATCAGAGCAAGGACGTTCGCCTGTAATACCTTTCTACCCTGTTGTCAAAAAAGATTTGACTTTTATTCACCTAGGTAATGACACCAAAGTGGAAGGCATGGTTAACTTTGAAAAACTTAGAATGATTGCAAAGGAAGTAAGAACCCTAACAAATATGTGCAGTTCACCATATGATCTCTTGACTCTTTTAGAATTGGGAAATCAACCACCTTCTAATGCTATGGTGGCCCTTAACCAACTCACTACTGGAGTACAGCAAGGTCAAGTGACTGTTAAAAGAAGAAAAAAATCATCAAATGCACCAAATCAAAAAAAGATGTTTGAAGAAGCTCAAATGGTCCGTAGAGTTAAAGCCTATTTGAACCGTATGCATGTTGAAACGGATGAGGAAAGATTACATGCACTATCGATCGAGTGTGAAGGGGCAGGTCCAGCTCCTACTATGCCGCGACGACGCCATCCTTCTCCTTCCTTATCCACTACTAGTAGTGCTTCCTCAGCCAGTGAAAGCAAAAAAAGTTTTACCGGTAATAAATTTGGTACTGCATCCCCTCAAGCCGTAAGAAAATTGTTAGCATTATCTGAACCTGCGAAAACGAGGCCCCACCAACCAAGACCACCGCCACCCCCCTCGGGTCCGTCACCTAGTTTGCATCGCCGTGATGGACCAATGCCTGGTATATGCTGCCCGCGTTCAGCTCACGAAAGGTCGCACTCCGACACACCCACACCCCTTCCTGTTGATCTTTCTGCAGAAAGCAGTAGCGTCACGTCTCTTGTAAACTTGCCATTAAAGAAAACTGGCTCGGTGACTTCGAATGATAGCGGCCACGTCTCGTGCACGGTGCAGAGCTGCACACGACCCGTGCCGCCACCGCGCATGCCGCAGCCTCAGTACATGCCTCACACGCTGGTCACGCAAGTGGCGCGTCTCGAACGGCTTAGTCGCGCACACTCGCACGAGGGCGTCACTCGTTCGTATGATTACTATCATGACCATCCTGATGATGAGGATGACGATCAGCAAGTTTCAGCCGTTTGA
Protein
MLRGGRGGRHSPELYPHTLKCSNASDTSSAYSGSDTMTSVHSSLDMDMEVDLSGLLESIVDSDEEEDMEEEILIVRDAVRECLEKDPSERTDDDIETLLEFTRHLTAFTNMTLTVRRALCAVMVFAVVEKAGTVVMNDGEEHDSWSVLINGHVGIEHANGEIEHLNIGDSFGMAEATLEKLYHRGVMTTRCDDCQFVCVTQTDYYRILHQGEENIRRHENDNGVVVLVTEYRGVADFETDPNMMEFLENFEISLERENMESQLRLLNIACSAKARTRSVTLSRPSRDEPLYFTILGGYERGYGIFIFKVEKHSKAEDVGFKRGDQILEVNGQSFQHVSHAKAMEIITGSTHLSITVKSNLLAFKQMLSMPENSPRQRGGANIVRWQTDPRARLSTAELLTDDPITLTPSFSSPTKKPQQNSTKKETQKNFMTLGPKRKLQKALMKMNLLPKNTISDGLHTDDSVLSNTESLNRANTSTSFYSSHSNPDLISICYDEYHSSDYPEHVLKVYRPDQTCKYLLVHKETTAREVVMLSVKEFGISDPSSNFSLCEVSVAQGGIIKQHRLPDQLQNLAERIGLSSRYYLKTNGISETLVPDDMAPELLRESVVHFLQLNAVEVAVQLTLQDFCIFRQIESTEYVDDLFELKSRYGTPMLSQFAELVNKEMFWVVTEVVNEQNLVRRSKIIKQFIKVARHCKECKNFNSMFAIISGLGHGAVSRLRMTWEKLPTKYYKLFTDLQMLMDPSRNMSKYRQLVTSEQGRSPVIPFYPVVKKDLTFIHLGNDTKVEGMVNFEKLRMIAKEVRTLTNMCSSPYDLLTLLELGNQPPSNAMVALNQLTTGVQQGQVTVKRRKKSSNAPNQKKMFEEAQMVRRVKAYLNRMHVETDEERLHALSIECEGAGPAPTMPRRRHPSPSLSTTSSASSASESKKSFTGNKFGTASPQAVRKLLALSEPAKTRPHQPRPPPPPSGPSPSLHRRDGPMPGICCPRSAHERSHSDTPTPLPVDLSAESSSVTSLVNLPLKKTGSVTSNDSGHVSCTVQSCTRPVPPPRMPQPQYMPHTLVTQVARLERLSRAHSHEGVTRSYDYYHDHPDDEDDDQQVSAV

Summary

EMBL
RSAL01000053    RVE50101.1    NWSH01001069    PCG72798.1    AGBW02013634    OWR43078.1    + More
ODYU01011623    SOQ57483.1    KQ460045    KPJ18200.1    KQ459604    KPI92291.1    GDQN01007766    JAT83288.1    KK852483    KDR22845.1    KQ434878    KZC09934.1    KQ978430    KYM94006.1    KK113797    KFM61075.1    KQ982498    KYQ55669.1    GL445584    EFN89320.1    JH431816    KK107124    EZA58462.1    KZ288197    PBC33731.1    GL888066    EGI68294.1    LRGB01000446    KZS19087.1    ADTU01024058    ADTU01024059    ADTU01024060    ADTU01024061    ADTU01024062    GEDC01003751    JAS33547.1    KQ435699    KOX80604.1    GBYB01004021    JAG73788.1    GEDC01029210    JAS08088.1    GBYB01004019    JAG73786.1    LBMM01003364    KMQ93613.1    GBYB01004023    JAG73790.1    GBYB01005748    JAG75515.1    GBYB01005745    JAG75512.1    GEDC01000113    JAS37185.1    GEDC01026335    GEDC01016675    GEDC01009202    GEDC01008369    JAS10963.1    JAS20623.1    JAS28096.1    JAS28929.1    GEDC01009785    JAS27513.1    GL437125    EFN70966.1    QOIP01000002    RLU25874.1    GECZ01032008    GECZ01027726    JAS37761.1    JAS42043.1    KQ976511    KYM82433.1    GL769036    EFZ10828.1    KQ981280    KYN43372.1    NNAY01000632    OXU27302.1    GECZ01013162    JAS56607.1    ABLF02017166    KQ980824    KYN12643.1    GFXV01006393    MBW18198.1    GGMS01000155    MBY69358.1    KQ971332    KYB28271.1    GBHO01043980    GBHO01043978    GBHO01043977    GBHO01027047    GBHO01020937    JAF99623.1    JAF99625.1    JAF99626.1    JAG16557.1    JAG22667.1    GDHC01013257    JAQ05372.1    GBHO01043968    GBHO01025217    GBHO01025216    GBHO01014846    GBHO01014843    JAF99635.1    JAG18387.1    JAG18388.1    JAG28758.1    JAG28761.1    GBHO01026993    GBHO01025212    GBHO01025208    GBHO01014844    GBHO01014842    GDHC01019838    GDHC01015037    JAG16611.1    JAG18392.1    JAG18396.1    JAG28760.1    JAG28762.1    JAP98790.1    JAQ03592.1    GBHO01043975    GBHO01043974    GBHO01026999    GBHO01025211    JAF99628.1    JAF99629.1    JAG16605.1    JAG18393.1    GBHO01043979    GBHO01043976    GBHO01043973    GBHO01034709    GBHO01014845    JAF99624.1    JAF99627.1    JAF99630.1    JAG08895.1    JAG28759.1    EFA01027.2    GDHC01002306    JAQ16323.1    GBHO01043967    GBHO01025214    GBHO01025200    GBHO01014841    GBHO01014840    JAF99636.1    JAG18390.1    JAG18404.1    JAG28763.1    JAG28764.1    GDHC01021726    JAP96902.1    GFTR01008622    JAW07804.1    ACPB03019608    GBBI01002417    JAC16295.1    APGK01026642    APGK01026643    KB740635    ENN79893.1    KB632195    ERL89950.1    KYB28272.1    GBFC01000077    JAC59261.1    GFDF01006359    JAV07725.1    GFDF01006861    JAV07223.1    GFDF01006878    JAV07206.1    GDIQ01178839    JAK72886.1    GL732621    EFX70422.1    GDIQ01105769    JAL45957.1    GDIQ01247822    JAK03903.1    GDIQ01099416    JAL52310.1    GDIP01123773    JAL79941.1    GDIQ01216784    JAK34941.1    GDIQ01216785    JAK34940.1    GDIQ01029047    JAN65690.1    GDIP01113920    JAL89794.1    GDIP01254953    JAI68448.1    GDIP01041338    JAM62377.1    GDIQ01181288    JAK70437.1    GDIQ01186340    JAK65385.1    GDIP01159614    JAJ63788.1    GDIP01254954    JAI68447.1    GDIQ01182546    JAK69179.1    GDIQ01201636    JAK50089.1    GDIP01163414    JAJ59988.1    GDIQ01237580    JAK14145.1    GDIP01176662    JAJ46740.1   
Pfam
PF00788   RA        + More
PF00617   RasGEF
PF00595   PDZ
PF00618   RasGEF_N
PF17820   PDZ_6
Interpro
IPR018490   cNMP-bd-like        + More
IPR029071   Ubiquitin-like_domsf       
IPR014710   RmlC-like_jellyroll       
IPR000159   RA_dom       
IPR019804   Ras_G-nucl-exch_fac_CS       
IPR001478   PDZ       
IPR000651   Ras-like_Gua-exchang_fac_N       
IPR036034   PDZ_sf       
IPR001895   RASGEF_cat_dom       
IPR000595   cNMP-bd_dom       
IPR036964   RASGEF_cat_dom_sf       
IPR008937   Ras-like_GEF       
IPR023578   Ras_GEF_dom_sf       
IPR041489   PDZ_6       
SUPFAM
SSF54236   SSF54236        + More
SSF51206   SSF51206       
SSF48366   SSF48366       
SSF50156   SSF50156       
Gene 3D
PDB
4F7Z     E-value=1.48218e-41,     Score=431

Ontologies

Topology

Length:
1101
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1078
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00518
outside
1  -  1101
 
 

Population Genetic Test Statistics

Pi
257.133744
Theta
213.857917
Tajima's D
0.559299
CLR
0.175157
CSRT
0.533423328833558
Interpretation
Uncertain
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