Gene

KWMTBOMO15167  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004982

Annotation

PREDICTED:_polyglutamine-binding_protein_1_[Papilio_machaon]

Location

Bomo_Chr25(-):6049760-6050693      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.764

CDS

ATGCCTTTACCGCCGGCGTTAGCTGCTCGTTTAGCTAAAAGAGGTCTTTTGAAACAAAATGCAGATTCCACCGCTGTCGCATCTGTTGGTCAAATCAACGAAGAAATAATTGCAGAAGATTATGATAGTAAGCCTAACGAAAATGGAAAAGATGAGCCTTGGGAAGGCTTTGTCGATCCTGTCAAAGGCCATCGAGGATGCCCTAATAAAAGTAATATTTATCATGAATGTTCTACTTTTTGTATTAAAAGATGGAAGCAAGGTAAACTGGTACCGACTGAGACATATTTAGAACACAAGGAGAAAGTTTTAGAGCTATGGCCCTTGCCACCAGGATGGGAAGAAGTGTTTGATGAAGGTTATGGTCAACATTATTTTTGGAATGTGCACACTAATCTGGTTTCGTGGATACCACCCGGACATCCCCGTGCTGTGCCTACGGAATCTGCCGCACAATTGCGCGAAGAACGTCTGATGAAAGAAGGCGACGAAAGTGATGAAAGCAGTGAGGCCTCGGATCAGGAAGTTCCGCAGATTCAAAAAGATAAGAAACCTGATCGCCGAGAAAGAGAAAAGGAACATTCACATCATAGAGACAAAAAAAGGCTCAGGGTCAAAGATAATGACTTGGATCCAATGGACCCAGCATCTTACTCTGATGTACCTAGAGGTAATTGGACATCAGGTTTAGATACACATTCTAAAACAGGTGTAGATACCACAGCCTCTGGTTCACTCTATCAAATGAGGCCCTATCCAGCACCTGGAGCAATACTTGCAGCTAATGCAAAACAACATTCTCCACCACCTTCACCATAA

Protein

MPLPPALAARLAKRGLLKQNADSTAVASVGQINEEIIAEDYDSKPNENGKDEPWEGFVDPVKGHRGCPNKSNIYHECSTFCIKRWKQGKLVPTETYLEHKEKVLELWPLPPGWEEVFDEGYGQHYFWNVHTNLVSWIPPGHPRAVPTESAAQLREERLMKEGDESDESSEASDQEVPQIQKDKKPDRREREKEHSHHRDKKRLRVKDNDLDPMDPASYSDVPRGNWTSGLDTHSKTGVDTTASGSLYQMRPYPAPGAILAANAKQHSPPPSP

Uniprot

H9J641   A0A194RLA8   A0A1E1W0U1   A0A194PHU1   A0A2H1WRA7   A0A2A4JMI1   + More
A0A0L7KND3   A0A3S2NFY7   S4P4D2   A0A212F1M9   A0A1S3DHU9   A0A224XTZ9   A0A0P4VQS9   R4FM17   A0A2R7WIF2   E0W331   J9K136   C4WSG7   A0A0C9PUG0   A0A0A9YR75   A0A2H8TD72   A0A069DRZ6   A0A0N0BCN9   A0A026WPK8   A0A151IEH6   A0A151X3Q2   A0A087ZQX7   A0A195EEX7   A0A2A3EKU4   A0A0L7RC77   A0A195BQ27   A0A195EST0   A0A158NTJ7   F4WQW2   E2C4F1   A0A0J7KWI9   A0A1B0GJ48   A0A1B6CRD3   A0A1L8DG11   A0A1B6HJX7   A0A232EUI5   K7J773   E9FZ08   A0A1B6EUH7   A0A2J7RTD2   A0A1B6KDX2   A0A1B6KEL8   A0A164Y8U1   A0A067QN72   A0A0P5IT66   A0A0P5NWL0   A0A293MZ93   A0A0P5Q252   E2AFX7   A0A0P5FJB5   A0A0P5QR97   A0A0P5K1G5   A0A1Z5L691   T1IT40   A0A2R5LJ02   G3MFB8   A0A1E1X9N0   A0A023GKM2   A0A131XF70   A0A0P4WUB9   B7QKP7   V5H8Y7   A0A224Z627   L7M858   A0A1E1XU70   A0A023FKN7   A0A154PLC4   A0A087U604   A0A0P5XRL5   D6WM89   A0A3P8F4Z3   A0A0P6BKH2   A0A2G9UJU2   A0A1I7XSD6   A0A226EN44   A0A1Y1K1I4   A0A1D1UWR2   T1FNT2   A0A3S3P4V3   T1L017   A0A1B0GQN4   A0A336K7P6   A0A016VS23   A0A158R2K2   A0A0R3PQD9   J3JUS8   A0A0K0DMY9   A0A310S937   A0A0C2CAY4   A0A0C9S1J8   W2T5M9   K1R639   A0A0D8XLD1   A0A0V1N9E7   A0A1Y3EIC8  

Pubmed

19121390    26354079    26227816    23622113    22118469    27129103    + More
20566863    25401762    26823975    26334808    24508170    30249741    21347285    21719571    20798317    28648823    20075255    21292972    24845553    28528879    22216098    28503490    28049606    25765539    28797301    25576852    29209593    18362917    19820115    23874975    28004739    27649274    23254933    25730766    22516182    26131772    22992520    26856411   

EMBL

BABH01029940    KQ460045    KPJ18204.1    GDQN01010449    JAT80605.1    KQ459604    + More
KPI92289.1    ODYU01010411    SOQ55492.1    NWSH01001069    PCG72794.1    JTDY01008322    KOB64625.1    RSAL01000053    RVE50098.1    GAIX01006024    JAA86536.1    AGBW02010844    OWR47642.1    GFTR01004434    JAW11992.1    GDKW01001802    JAI54793.1    ACPB03006429    GAHY01001899    JAA75611.1    KK854722    PTY18175.1    DS235882    EEB20037.1    ABLF02017871    ABLF02017872    AK340182    BAH70837.1    GBYB01005013    JAG74780.1    GBHO01008047    GBRD01009900    GDHC01015924    JAG35557.1    JAG55924.1    JAQ02705.1    GFXV01000248    MBW12053.1    GBGD01002492    JAC86397.1    KQ435911    KOX68914.1    KK107152    QOIP01000007    EZA57024.1    RLU20723.1    KQ977870    KYM99230.1    KQ982562    KYQ54890.1    KQ978983    KYN26793.1    KZ288226    PBC31882.1    KQ414616    KOC68433.1    KQ976424    KYM88627.1    KQ981993    KYN30939.1    ADTU01025983    GL888275    EGI63475.1    GL452462    EFN77188.1    LBMM01002588    KMQ94609.1    AJWK01019308    GEDC01021172    GEDC01011979    JAS16126.1    JAS25319.1    GFDF01008692    JAV05392.1    GECU01032744    GECU01024481    JAS74962.1    JAS83225.1    NNAY01002129    OXU22001.1    GL732527    EFX87679.1    GECZ01028209    JAS41560.1    NEVH01000006    PNF44084.1    GEBQ01030382    JAT09595.1    GEBQ01030065    JAT09912.1    LRGB01000930    KZS14997.1    KK853217    KDR09757.1    GDIQ01209418    JAK42307.1    GDIQ01143792    JAL07934.1    GFWV01020523    MAA45251.1    GDIQ01126805    JAL24921.1    GL439180    EFN67653.1    GDIQ01256228    JAJ95496.1    GDIQ01120456    JAL31270.1    GDIQ01191118    JAK60607.1    GFJQ02004044    JAW02926.1    AFFK01019071    GGLE01005292    MBY09418.1    JO840569    AEO32186.1    GFAC01003223    JAT95965.1    GBBM01002068    JAC33350.1    GEFH01003831    JAP64750.1    GDIP01253029    JAI70372.1    ABJB010231419    ABJB010741897    DS961460    EEC19419.1    GANP01010869    JAB73599.1    GFPF01010688    MAA21834.1    GACK01005686    JAA59348.1    GFAA01000612    JAU02823.1    GBBK01003254    JAC21228.1    KQ434960    KZC12633.1    KK118353    KFM72793.1    GDIP01068318    JAM35397.1    KQ971343    EFA04236.1    UZAH01032019    VDP19169.1    GDIP01021109    JAM82606.1    KZ346246    PIO70515.1    LNIX01000002    OXA59083.1    GEZM01095841    JAV55303.1    BDGG01000002    GAU93030.1    AMQM01008205    KB097736    ESN90976.1    NCKU01010194    RWS00929.1    CAEY01000760    AJVK01007422    UFQS01000107    UFQT01000107    SSW99678.1    SSX20058.1    KE124926    JARK01001341    EPB74842.1    EYC30096.1    UYSL01022073    VDL79764.1    UYYA01004051    VDM59140.1    BT126993    AEE61955.1    KQ769179    OAD52941.1    KN768185    KIH47012.1    GBZX01002026    JAG90714.1    KI660200    ETN76914.1    JH816011    EKC41228.1    KN716408    KJH45438.1    JYDO01000002    KRZ80453.1    LVZM01015336    OUC43329.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000037510    UP000283053    + More
UP000007151    UP000079169    UP000015103    UP000009046    UP000007819    UP000053105    UP000053097    UP000279307    UP000078542    UP000075809    UP000005203    UP000078492    UP000242457    UP000053825    UP000078540    UP000078541    UP000005205    UP000007755    UP000008237    UP000036403    UP000092461    UP000215335    UP000002358    UP000000305    UP000235965    UP000076858    UP000027135    UP000000311    UP000001555    UP000076502    UP000054359    UP000007266    UP000095283    UP000198287    UP000186922    UP000015101    UP000285301    UP000015104    UP000092462    UP000024635    UP000038043    UP000271162    UP000050601    UP000267027    UP000035642    UP000005408    UP000053766    UP000054843    UP000243006   

PRIDE

H9J641   

Pfam

PF00397   WW

Interpro

IPR036020   WW_dom_sf        + More
IPR001202   WW_dom       

SUPFAM

SSF51045   SSF51045       

CDD

cd00201  WW

ProteinModelPortal

H9J641   A0A194RLA8   A0A1E1W0U1   A0A194PHU1   A0A2H1WRA7   A0A2A4JMI1   + More
A0A0L7KND3   A0A3S2NFY7   S4P4D2   A0A212F1M9   A0A1S3DHU9   A0A224XTZ9   A0A0P4VQS9   R4FM17   A0A2R7WIF2   E0W331   J9K136   C4WSG7   A0A0C9PUG0   A0A0A9YR75   A0A2H8TD72   A0A069DRZ6   A0A0N0BCN9   A0A026WPK8   A0A151IEH6   A0A151X3Q2   A0A087ZQX7   A0A195EEX7   A0A2A3EKU4   A0A0L7RC77   A0A195BQ27   A0A195EST0   A0A158NTJ7   F4WQW2   E2C4F1   A0A0J7KWI9   A0A1B0GJ48   A0A1B6CRD3   A0A1L8DG11   A0A1B6HJX7   A0A232EUI5   K7J773   E9FZ08   A0A1B6EUH7   A0A2J7RTD2   A0A1B6KDX2   A0A1B6KEL8   A0A164Y8U1   A0A067QN72   A0A0P5IT66   A0A0P5NWL0   A0A293MZ93   A0A0P5Q252   E2AFX7   A0A0P5FJB5   A0A0P5QR97   A0A0P5K1G5   A0A1Z5L691   T1IT40   A0A2R5LJ02   G3MFB8   A0A1E1X9N0   A0A023GKM2   A0A131XF70   A0A0P4WUB9   B7QKP7   V5H8Y7   A0A224Z627   L7M858   A0A1E1XU70   A0A023FKN7   A0A154PLC4   A0A087U604   A0A0P5XRL5   D6WM89   A0A3P8F4Z3   A0A0P6BKH2   A0A2G9UJU2   A0A1I7XSD6   A0A226EN44   A0A1Y1K1I4   A0A1D1UWR2   T1FNT2   A0A3S3P4V3   T1L017   A0A1B0GQN4   A0A336K7P6   A0A016VS23   A0A158R2K2   A0A0R3PQD9   J3JUS8   A0A0K0DMY9   A0A310S937   A0A0C2CAY4   A0A0C9S1J8   W2T5M9   K1R639   A0A0D8XLD1   A0A0V1N9E7   A0A1Y3EIC8  

PDB

4CDO     E-value=2.50425e-06,     Score=121

KEGG

101735548    K12865 polyglutamine-binding protein 1 | (RefSeq) polyglutamine-binding protein 1

PATHWAY

03040    Spliceosome - Bombyx mori (domestic silkworm)

GO

GO:0005515   GO:0005737   GO:0019343   GO:0006535   GO:0006391   GO:0031167   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

Length:

272

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00558

outside

1  -  272

 

 

Pi

294.368486

Theta

215.301317

Tajima's D

1.156117

CLR

3.411561

CSRT

0.702114894255287

Interpretation

Uncertain