Gene

KWMTBOMO15150

Pre Gene Modal

BGIBMGA004929

Annotation

PREDICTED:_putative_OPA3-like_protein_CG13603_[Bombyx_mori]

Location

Bomo_Chr25(+):5828924-5831174      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.341

CDS

ATGGTTGTAGGGGCGTTTCCAATAGCTAAATTATCTGTTTTGTTGGTGAAACAGATAAGTAAACCAATCGCGAACGTGTGCAAGGAGAGAGCCAAGAATAATCCATTTTTCAGAACTTATGTTTGTATGCCTCCAGCGCAATTTTACAATTGGTGTGAAGTTAAAGCCAAAATGTGGATTTTAAATTTGGGAAAACCTGTCAATATTCCTGTTTTAAGCCAGGAAATGGCCATTGAACTTGGAGCAAATCTTCTTGGCGAAACGGTTATATTCGTAATTGGTGCTAGCCTTTTAGTGATCGAGTACAATAGGCAAAGTAAAAAAGAAGCAGCCAAAGAAGCCAAGCGTGAAGAGGAGATGAAACACATCACAAGTACTATCACAGATTTGTATTTTACTGTGCAAAAACAACAGACACAACTCCGAGAAATGGAAAGGCTTATTCATTCTATTGGTGGAGATCAAGCACCCAAAAACAGCCCATCCTCTGACAAAGATAGTACAAATGGGAGATCACCACCAGATGCCACACTAAATAATCACGTTCCTGAACATATAAATCACAATTCACCAACTCTTAGTCCCACACCTTATCCAAATAAAGGCCTAATATTGCAGTCGTTGAATTATATACAAATGGACGCATTTAGCTCATTTTTCCCCAAAAATAATACTGAATATGAGAAAGAAAGAGATGAAGATAAATTTACAAGAAATAGGAGGGAGCCAGCTGTACTCTCTGGTATTTTGCATAATATCGAGAATAATTTTAGAAGTTTATTTTGA

Protein

MVVGAFPIAKLSVLLVKQISKPIANVCKERAKNNPFFRTYVCMPPAQFYNWCEVKAKMWILNLGKPVNIPVLSQEMAIELGANLLGETVIFVIGASLLVIEYNRQSKKEAAKEAKREEEMKHITSTITDLYFTVQKQQTQLREMERLIHSIGGDQAPKNSPSSDKDSTNGRSPPDATLNNHVPEHINHNSPTLSPTPYPNKGLILQSLNYIQMDAFSSFFPKNNTEYEKERDEDKFTRNRREPAVLSGILHNIENNFRSLF

Uniprot

H9J5Y8   A0A3S2NVT5   S4PY94   A0A1E1WJ79   A0A2A4JLU2   A0A0L7K4J9   + More
A0A2H1WZB2   A0A194RK57   A0A194PFW4   A0A182G473   B0W8M3   Q17CI0   Q17CI2   Q17CI1   A0A1S4F833   A0A084WQS9   A0A182RNG8   A0A182VR91   A0A182JIP5   A0A0K8UH76   A0A0L0BYI4   A0A1Q3F1Z7   A0A067QPY7   A0A1B6ESY8   A0A1B6GE14   A0A1B6M0Z4   A0A069DQ88   B4JTZ5   B4K5E6   B4LXS7   A0A1I8MDZ8   A0A0M4F451   A0A0A1WMA1   A0A0V0G8B3   A0A034VMC5   A0A1Y1M905   A0A1A9WU75   N6UFQ1   A0A0A1X4V6   A0A0K8WA13   A0A336M6R0   A0A3B0K4V5   A0A1L8DCA0   W8C9Q4   A0A1I8P229   A0A1B6K9T9   A0A1W4U903   A0A1L8DCQ5   D6WR52   W8BT61   B4PNZ6   A0A0K8TNQ2   B3P8C5   B4HG02   A0A1B6GUQ9   T1I148   A0A1A9Y105   A0A1S3DEU5   C4WWR3  

Pubmed

19121390    23622113    26227816    26354079    26483478    17510324    + More
24438588    26108605    24845553    26334808    17994087    25315136    25830018    25348373    28004739    23537049    24495485    18362917    19820115    17550304    26369729   

EMBL

BABH01029964    BABH01029965    RSAL01000053    RVE50083.1    GAIX01003683    JAA88877.1    + More
GDQN01003981    JAT87073.1    NWSH01001030    PCG73027.1    JTDY01011012    KOB57704.1    ODYU01012229    SOQ58425.1    KQ460045    KPJ18218.1    KQ459604    KPI92276.1    JXUM01143234    JXUM01143235    JXUM01143236    JXUM01143237    KQ569558    KXJ68592.1    DS231859    EDS39073.1    CH477308    EAT44041.1    EAT44039.1    EAT44040.1    ATLV01025723    KE525398    KFB52573.1    GDHF01026629    JAI25685.1    JRES01001160    KNC25080.1    GFDL01013473    JAV21572.1    KK853074    KDR11762.1    GECZ01028789    JAS40980.1    GECZ01009077    JAS60692.1    GEBQ01010603    GEBQ01010390    JAT29374.1    JAT29587.1    GBGD01002849    JAC86040.1    CH916374    EDV91574.1    CH933806    EDW16172.1    CH940650    EDW67886.2    CP012526    ALC46107.1    GBXI01014521    JAC99770.1    GECL01001971    JAP04153.1    GAKP01015710    JAC43242.1    GEZM01037101    JAV82174.1    APGK01036917    KB740945    KB632197    ENN77482.1    ERL89999.1    GBXI01007963    JAD06329.1    GDHF01004318    JAI47996.1    UFQT01000609    SSX25700.1    OUUW01000013    SPP87732.1    GFDF01009991    JAV04093.1    GAMC01006441    JAC00115.1    GEBQ01031758    JAT08219.1    GFDF01009990    JAV04094.1    KQ971354    EFA07648.2    GAMC01006442    JAC00114.1    CM000160    EDW98206.2    GDAI01001852    JAI15751.1    CH954182    EDV53949.1    CH480815    EDW43395.1    GECZ01003686    JAS66083.1    ACPB03016551    ABLF02028600    AK342221    BAH72333.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000037510    UP000053240    UP000053268    + More
UP000069940    UP000249989    UP000002320    UP000008820    UP000030765    UP000075900    UP000075920    UP000075880    UP000037069    UP000027135    UP000001070    UP000009192    UP000008792    UP000095301    UP000092553    UP000091820    UP000019118    UP000030742    UP000268350    UP000095300    UP000192221    UP000007266    UP000002282    UP000008711    UP000001292    UP000015103    UP000092443    UP000079169    UP000007819   

PRIDE

H9J5Y8   

Pfam

PF07047   OPA3

Interpro

IPR010754   OPA3-like       

ProteinModelPortal

H9J5Y8   A0A3S2NVT5   S4PY94   A0A1E1WJ79   A0A2A4JLU2   A0A0L7K4J9   + More
A0A2H1WZB2   A0A194RK57   A0A194PFW4   A0A182G473   B0W8M3   Q17CI0   Q17CI2   Q17CI1   A0A1S4F833   A0A084WQS9   A0A182RNG8   A0A182VR91   A0A182JIP5   A0A0K8UH76   A0A0L0BYI4   A0A1Q3F1Z7   A0A067QPY7   A0A1B6ESY8   A0A1B6GE14   A0A1B6M0Z4   A0A069DQ88   B4JTZ5   B4K5E6   B4LXS7   A0A1I8MDZ8   A0A0M4F451   A0A0A1WMA1   A0A0V0G8B3   A0A034VMC5   A0A1Y1M905   A0A1A9WU75   N6UFQ1   A0A0A1X4V6   A0A0K8WA13   A0A336M6R0   A0A3B0K4V5   A0A1L8DCA0   W8C9Q4   A0A1I8P229   A0A1B6K9T9   A0A1W4U903   A0A1L8DCQ5   D6WR52   W8BT61   B4PNZ6   A0A0K8TNQ2   B3P8C5   B4HG02   A0A1B6GUQ9   T1I148   A0A1A9Y105   A0A1S3DEU5   C4WWR3  

KEGG

101745372    K23166 optic atrophy 3 protein | (RefSeq) putative OPA3-like protein CG13603

GO

GO:0016021   GO:0005739   GO:0019216  

PANTHER

PTHR12499  

Length:

261

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

7.98730999999999

Exp number, first 60 AAs:

0.03006

Total prob of N-in:

0.03344

outside

1  -  261

 

 

Pi

291.846569

Theta

230.392682

Tajima's D

0.81744

CLR

0

CSRT

0.608669566521674

Interpretation

Uncertain