Gene

KWMTBOMO15143  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004987

Annotation

PREDICTED:_digestive_organ_expansion_factor_homolog_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr25(-):5786893-5795313      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.401

CDS

ATGAAGGGAAAGAAATACTTTGGTAAAAAGAAGACAATAAAAGACCACATTAGTAAAAAGAAAAGAAAAAGTTCCAATGATACATATGTTACAAATAAAAAGGCTAAATTCAATCGATACAAAAATGTACAAAAGGTTGAGGAAGAGCTTGAAAAGAAAAAGCAGATGGAACGGAAGTTTCAAAGGGAACAAGAAGCTTATTCTGAAAGCGAAGAGGAACAAGATGTATACGGGCAACTGGTGTCTTGTTTTAGTAAACCAACAAACGCAATAGTAGTAAATAGTGACGAAGAAGTAGATTCTGATAGCCCCAGCCCTGAAATTGAAAGTTGTGCTCGTAAACGTGCTCGAAATGAGGAAGTTAGTAAGACCGAGAGTGACAGTGACTATAGTGATAGCGAAGACAATGCAAAGGGCCAAGATTTTGATAACACTGCTACTTTTGAAACAGAATTAGACCACGAAACTGATGATTCGTTCGTAAAACATCTACAATATGATTTACCTGATGAGTTGCTGATTTCATTAAACAACTCGCCCATGACAGTTTCTACTATTTCAAAGACATGGCCAGTGATTGGTAACATAACTATTGTTATACCTAGACCAATTGAAACAGCAATAAAGAAAGTTAAAGCTAAAATATCATTATTGGAAGATAAAACTTTTGCTGAACCCGGTACAGCACCTAGTCTTATTCACAAGGTTGATTTTGAAGAATTGAAAATAAAATCACAAATACATGGAAACATTGTCTCGGCGAATAAAACTAGTTTGGTAAAGAGAGATCTTGAACTATCTGAAGTTTTAACTCCATTACAAAAAGAAATTTTTTCAATACTCAACAACTATCAGGATTTGTATTACCCTGAAAGAACATTTAGTAATGCTGATGAAATTCGTTACATATATTGTCTTCATGCCATCAACCATATGCTGAAGACCAGAACACGAATTTTACATCATAATGCGAAATTGATAAAGAAAAATGATATTTCCGATGATTATAGAGATCAAGGATTAGTTCGTCCCAAGGTACTAGTAATGGTTCCATTCAAAAATGCAGCTTACAGAGTAGTGAAAACCTTAATGGAAATTTTGGTGCCAAAAGAGGCTGGTCAGGTGCTCAATAAAAAAAGATTTGAAGACGAGTTTACAGGAGGTGAACTTATCATGCCACGTAAAAATCCAAAGCCTGAGGACTATGAACTCATGTTCACTGGCAACACAGATGATACATTCAGGATAGGCATGACGGTCACCAAGAAAAGTCTTAAGTTATATACAGATTTTTACTCATCAGACATCATAGTCGCATCACCACTTGGTCTACGAATGTTGGTCGGAGCTGAAGGGGAGGAAGACAGAGATTATGATTTTTTGGCTTCCATAGAAATTTTGATTATGGATCAAGCGGATGTGTTCTTAATGCAGAATTGGGATCATTTGCTACATGTTCTTGACCATTTTCATCTTCAACCAAAGAAAACGCACGATACTGACTTCTCTAGAGTCAGATCGTGGGCAGTCAACGGATGGGCTAAATATTACAGACAAACATTAGTATTCGCTTCCGTGCTCCTGCCGGAAATCAAATCTGTACTGAATAAGAAATGCCATAACTACGCCGGGAAAGTGCTCGTGGAGAATCCTGTAGAAGTGGGGAGTATTCAACAAGTATTGTTACAGATACCTCAGATATTTCACAGATTCAATGCGTCGACAGCACTGGAATCGGCCGAGGCCAGATTCGAGTACTTCATAAAGGAGGTTCTGCCCAAGCAGCGTGACACCCTCATGAGCCACACGCTCATCTACGTGCCGAGCTATTTCGATTACGTGCGCATACGGAATTATTTTAAGAAAGAAGACATTAGTTTTGTGCAAATCTGCGAATACTCTAAGGACGCGAAGATAGCCCGAGCCAGAGATATGTTCTTCCACACCGAAGCACACTTCTTGCTGTATTCAGAGAGAGTCCACTTCTTCCGGAGATTCAGGATCAAAGGGATCCGGCATATAATATTTTATCAGCCGCCGACGTATCCGCACTTTTACTCCGAGATGTGTAACCTGATGCAGGAGAGCAACCAGAACAAGTACGGGGGCAGCGAGTGTAACATGACGGTGTCGGTGCTGTACTGCCGCTGCGACCTCGTGCGGCTGGGCGCGCTGCTCGGCGCCGCGCGGGGCGCACGCGTGCTGCGCGCGGACCGGCCCGTGCACATGTACGTCACGGGGGACTGA

Protein

MKGKKYFGKKKTIKDHISKKKRKSSNDTYVTNKKAKFNRYKNVQKVEEELEKKKQMERKFQREQEAYSESEEEQDVYGQLVSCFSKPTNAIVVNSDEEVDSDSPSPEIESCARKRARNEEVSKTESDSDYSDSEDNAKGQDFDNTATFETELDHETDDSFVKHLQYDLPDELLISLNNSPMTVSTISKTWPVIGNITIVIPRPIETAIKKVKAKISLLEDKTFAEPGTAPSLIHKVDFEELKIKSQIHGNIVSANKTSLVKRDLELSEVLTPLQKEIFSILNNYQDLYYPERTFSNADEIRYIYCLHAINHMLKTRTRILHHNAKLIKKNDISDDYRDQGLVRPKVLVMVPFKNAAYRVVKTLMEILVPKEAGQVLNKKRFEDEFTGGELIMPRKNPKPEDYELMFTGNTDDTFRIGMTVTKKSLKLYTDFYSSDIIVASPLGLRMLVGAEGEEDRDYDFLASIEILIMDQADVFLMQNWDHLLHVLDHFHLQPKKTHDTDFSRVRSWAVNGWAKYYRQTLVFASVLLPEIKSVLNKKCHNYAGKVLVENPVEVGSIQQVLLQIPQIFHRFNASTALESAEARFEYFIKEVLPKQRDTLMSHTLIYVPSYFDYVRIRNYFKKEDISFVQICEYSKDAKIARARDMFFHTEAHFLLYSERVHFFRRFRIKGIRHIIFYQPPTYPHFYSEMCNLMQESNQNKYGGSECNMTVSVLYCRCDLVRLGALLGAARGARVLRADRPVHMYVTGD

Uniprot

H9J646   A0A194PG44   A0A2H1WJS4   A0A212ETS2   A0A2A4JMT8   A0A194RLN3   + More
A0A088A089   A0A2J7RA10   A0A2A3E3T9   A0A067RS99   K7JAL5   A0A0L7QXE1   A0A0C9PS10   A0A154P377   D6WSQ2   A0A1B6CSA7   A0A310SM13   A0A0M9A7F0   A0A1Y1KVI5   A0A0T6B6G4   A0A026WWE1   A0A3L8D8R9   A0A1B6LTA9   E0V952   E2AQF3   A0A0J7KPB0   E9IBC8   F4WG63   A0A158NT42   A0A195BHK1   A0A195C6H2   A0A151WJA1   A0A195EGJ0   E2BA28   A0A195F0R7   A0A1B6EWB1   N6UA06   A0A1J1J5E8   A0A1B0DFS0   A0A1B0DR92   A0A336M4J1   A0A336MKR4   Q170X3   A0A182H0Q6   A0A146LWI3   A0A0K8SP75   A0A0A9W0B6   A0A069DVD7   A0A226ER57   B0WN55   A0A1Q3F043   A0A1Q3EZY8   T1IPY6   A0A2S2R4V6   A0A2M4CS76   A0A2M4BG16   A0A182SKL2   J9K008   A0A182PLN0   T1PK44   A0A2H8THG5   A0A182J943   A0A1I8PXJ4   A0A182YQW3   A0A182N050   V9KE10   A0A2S2NZB6   A0A2T7NZX2   A0A182JUW5   A0A182FTG9   H3AFQ5   H3AFQ6   A0A2M3Z8B9   A0A2M3Z890   A0A182RVT0   A0A182U3I0   Q7QHF7   A0A182V6M7   A0A182HWD6   A0A182X5L3   A0A084WCE0   A2BDC8  

Pubmed

19121390    26354079    22118469    24845553    20075255    18362917    + More
19820115    28004739    24508170    30249741    20566863    20798317    21282665    21719571    21347285    23537049    17510324    26483478    26823975    25401762    26334808    25315136    25244985    24402279    9215903    12364791    24438588   

EMBL

BABH01029969    KQ459604    KPI92267.1    ODYU01009106    SOQ53288.1    AGBW02012531    + More
OWR44886.1    NWSH01001030    PCG73038.1    KQ460045    KPJ18225.1    NEVH01006580    PNF37678.1    KZ288387    PBC26423.1    KK852498    KDR22684.1    AAZX01002449    KQ414704    KOC63275.1    GBYB01004151    GBYB01004153    GBYB01007620    JAG73918.1    JAG73920.1    JAG77387.1    KQ434809    KZC06385.1    KQ971354    EFA05884.1    GEDC01021175    JAS16123.1    KQ761039    OAD58335.1    KQ435719    KOX78747.1    GEZM01075244    JAV64180.1    LJIG01009500    KRT82956.1    KK107078    EZA60395.1    QOIP01000011    RLU16704.1    GEBQ01013093    JAT26884.1    DS234988    EEB09908.1    GL441750    EFN64333.1    LBMM01004665    KMQ92187.1    GL762111    EFZ22054.1    GL888128    EGI66830.1    ADTU01025499    KQ976488    KYM83629.1    KQ978205    KYM96464.1    KQ983039    KYQ47938.1    KQ978957    KYN27017.1    GL446664    EFN87437.1    KQ981897    KYN33704.1    GECZ01029290    GECZ01027504    JAS40479.1    JAS42265.1    APGK01036914    KB740945    KB632197    ENN77471.1    ERL89988.1    CVRI01000069    CRL07028.1    AJVK01058952    AJVK01008987    UFQS01000550    UFQT01000550    SSX04812.1    SSX25175.1    UFQT01001426    SSX30510.1    CH477463    EAT40536.1    JXUM01101760    KQ564673    KXJ71921.1    GDHC01007592    JAQ11037.1    GBRD01010672    JAG55152.1    GBHO01042335    JAG01269.1    GBGD01000836    JAC88053.1    LNIX01000002    OXA60115.1    DS232007    EDS31486.1    GFDL01014122    JAV20923.1    GFDL01014247    JAV20798.1    JH431265    GGMS01015856    MBY85059.1    GGFL01004028    MBW68206.1    GGFJ01002826    MBW51967.1    ABLF02028286    KA648455    AFP63084.1    GFXV01001665    MBW13470.1    JW863674    AFO96191.1    GGMR01009679    MBY22298.1    PZQS01000008    PVD26720.1    AFYH01083724    AFYH01083725    AFYH01083726    AFYH01083727    GGFM01004001    MBW24752.1    GGFM01003998    MBW24749.1    AAAB01008816    EAA05137.4    APCN01001485    ATLV01022659    KE525335    KFB47884.1    BC130198    AAI30199.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000218220    UP000053240    UP000005203    + More
UP000235965    UP000242457    UP000027135    UP000002358    UP000053825    UP000076502    UP000007266    UP000053105    UP000053097    UP000279307    UP000009046    UP000000311    UP000036403    UP000007755    UP000005205    UP000078540    UP000078542    UP000075809    UP000078492    UP000008237    UP000078541    UP000019118    UP000030742    UP000183832    UP000092462    UP000008820    UP000069940    UP000249989    UP000198287    UP000002320    UP000075901    UP000007819    UP000075885    UP000095301    UP000075880    UP000095300    UP000076408    UP000075884    UP000245119    UP000075881    UP000069272    UP000008672    UP000075900    UP000075902    UP000007062    UP000075903    UP000075840    UP000076407    UP000030765   

PRIDE

H9J646   

Pfam

PF06862   UTP25        + More
PF07776   zf-AD
PF00096   zf-C2H2

Interpro

IPR010678   Digest_organ_expansion_fac-prd        + More
IPR027417   P-loop_NTPase       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       

SUPFAM

SSF52540   SSF52540        + More
SSF57667   SSF57667       

ProteinModelPortal

H9J646   A0A194PG44   A0A2H1WJS4   A0A212ETS2   A0A2A4JMT8   A0A194RLN3   + More
A0A088A089   A0A2J7RA10   A0A2A3E3T9   A0A067RS99   K7JAL5   A0A0L7QXE1   A0A0C9PS10   A0A154P377   D6WSQ2   A0A1B6CSA7   A0A310SM13   A0A0M9A7F0   A0A1Y1KVI5   A0A0T6B6G4   A0A026WWE1   A0A3L8D8R9   A0A1B6LTA9   E0V952   E2AQF3   A0A0J7KPB0   E9IBC8   F4WG63   A0A158NT42   A0A195BHK1   A0A195C6H2   A0A151WJA1   A0A195EGJ0   E2BA28   A0A195F0R7   A0A1B6EWB1   N6UA06   A0A1J1J5E8   A0A1B0DFS0   A0A1B0DR92   A0A336M4J1   A0A336MKR4   Q170X3   A0A182H0Q6   A0A146LWI3   A0A0K8SP75   A0A0A9W0B6   A0A069DVD7   A0A226ER57   B0WN55   A0A1Q3F043   A0A1Q3EZY8   T1IPY6   A0A2S2R4V6   A0A2M4CS76   A0A2M4BG16   A0A182SKL2   J9K008   A0A182PLN0   T1PK44   A0A2H8THG5   A0A182J943   A0A1I8PXJ4   A0A182YQW3   A0A182N050   V9KE10   A0A2S2NZB6   A0A2T7NZX2   A0A182JUW5   A0A182FTG9   H3AFQ5   H3AFQ6   A0A2M3Z8B9   A0A2M3Z890   A0A182RVT0   A0A182U3I0   Q7QHF7   A0A182V6M7   A0A182HWD6   A0A182X5L3   A0A084WCE0   A2BDC8  

KEGG

101737904    K14774 U3 small nucleolar RNA-associated protein 25 | (RefSeq) digestive organ expansion factor homo

GO

GO:0005634   GO:0034511   GO:0000462   GO:0032040   GO:0019843   GO:0005730   GO:0003676   GO:0008270   GO:0031648   GO:0048485   GO:0030163   GO:0048546   GO:0035265   GO:0031017   GO:0090594   GO:0008152   GO:0003677   GO:0046983   GO:0005525   GO:0000166   GO:0008408   GO:0005112   GO:0015930  

PANTHER

PTHR12933  

Subcellular location

Nucleus  

Length:

748

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02225

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00078

outside

1  -  748

 

 

Pi

246.815628

Theta

186.819363

Tajima's D

1.248186

CLR

0.010738

CSRT

0.725013749312534

Interpretation

Uncertain