SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15142
Pre Gene Modal
BGIBMGA004925
Annotation
PREDICTED:_uncharacterized_protein_LOC101738037_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.306 PlasmaMembrane   Reliability : 1.803
 

Sequence

CDS
ATGTCGAGCAAGTCGTTCACGTCCGGTAGCATGCGGTCGTGCGCGGGCTCGATGCGACTCGGCACGACCTCCGGGCACGAGCTCGTGTTCGACTCACTCTACGAGCGGAAGCGCGACAAGAAAAGTGTCCGCGTGCTCACTGTCATCATTTATGTGTTCTGCGTGTCACTCGCTGCGATAATGCTCTCCCTCTACTACGTCTTCTTCTGGGAGCCTAAGGACGCGCAATACGCGCAACGAAAGGTGTTACATAATGTAGAGAAGCAAACCAGCACTACACCATTGCCCACATGCTTAATGCCCTACACCGGAGGAGGCGATACCCCAGTGAATGAACACACACCATTAACATCAAATAGCTTTACGATTCCCGCGAACGAGAGTGTTTCGACAACGCCAGCTAACCAAACTAACCAAACTCTGAACGATATAGAAGATCTTACAGAATCTGTTTACCCAATCAACGGCACTACAAATGACACAGGCTCTTTCAATTATACCGAGAGCATCACATGA
Protein
MSSKSFTSGSMRSCAGSMRLGTTSGHELVFDSLYERKRDKKSVRVLTVIIYVFCVSLAAIMLSLYYVFFWEPKDAQYAQRKVLHNVEKQTSTTPLPTCLMPYTGGGDTPVNEHTPLTSNSFTIPANESVSTTPANQTNQTLNDIEDLTESVYPINGTTNDTGSFNYTESIT

Summary

Pfam
PF15018   InaF-motif
Interpro
IPR029162   InaF-motif       

Ontologies

Topology

Length:
171
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.04501
Exp number, first 60 AAs:
14.31217
Total prob of N-in:
0.57281
POSSIBLE N-term signal
sequence
outside
1  -  47
TMhelix
48  -  70
inside
71  -  171
 
 

Population Genetic Test Statistics

Pi
286.658612
Theta
196.473141
Tajima's D
1.145814
CLR
0.000001
CSRT
0.702164891755412
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号