SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15135  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004919
Annotation
PREDICTED:_3'(2')?5'-bisphosphate_nucleotidase_1_isoform_X2_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 2.762
 

Sequence

CDS
ATGTACGGTAGTGTTCCGTTAATTGTTAGGTTACTAGCTTCGTCAGTATCAGTTGCCAACCGAGCTGGGAAAATCGTTCGCGATGTAATGAGCAAAGGGGAACTTGGTATAGTGGAAAAGGGTAAAGACGACTATCAAACAGAAGCAGATAGGTCTGCTCAACGCTGTATTGTTGCATCACTTGCAGCTCAATATCCTAACTTAAAAATAATAGGTGAAGAAGATAGTTTGGAGGATGAGGGTGAAGTTGTGAGTGATTGGTTAGTGAATGAAATAGATAAGGAAATATTAAAATTACAATGTCCTCCAAATCTTCAAGAAGTCAAGGAAGAGGATATTGTAGTGTGGGTGGATCCACTTGATGGAACTTCAGAATATACTCAAGGATTCTTAGAACATGTGACTGTACTAATTGGTATAGCTGTGAATGAGACACCAGTTGCTGGTGTCATCCATCAACCATACTATAAAAATATAGTTGAAGGTGACAAGAAAATCGGTAGGACAATTTGGGGACTGCATGGTGTGGGTGTAGGTGGATTTACCCCGGCTCCTCCTCCTGAATCCATCGTAATTACAACTACTAGAAGCCATTCGAATCCTGTTGTGGAGGAGGCACTAAAAGTTATGAATGCTTCAAAGGTGCTTAGGGTTGGTGGAGCTGGTTACAAGGTCCTGCAATTATTAGAAGGAAATGCATCAATATATGTTTTTGCTAGTCCCGGCTGTAAGAAATGGGATACTTGCGCACCTGAAGCGATTCTTTCCGCAGCAGGAGGGAAATTGACTGATATACTTGGTAACTTTTACAAATATGGAGCAAATGTTACTAAACCAAATAAAACTGGTGTGTTAGCTGCAGTTAATAACGAACTACACAGTTACGCTTTAGAAAGAATACCTGAAAAACTACAAGAAACTTTAGCAAATAAGTAG
Protein
MYGSVPLIVRLLASSVSVANRAGKIVRDVMSKGELGIVEKGKDDYQTEADRSAQRCIVASLAAQYPNLKIIGEEDSLEDEGEVVSDWLVNEIDKEILKLQCPPNLQEVKEEDIVVWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQPYYKNIVEGDKKIGRTIWGLHGVGVGGFTPAPPPESIVITTTRSHSNPVVEEALKVMNASKVLRVGGAGYKVLQLLEGNASIYVFASPGCKKWDTCAPEAILSAAGGKLTDILGNFYKYGANVTKPNKTGVLAAVNNELHSYALERIPEKLQETLANK

Summary

EMBL
BABH01029982    KQ459604    KPI92262.1    ODYU01009511    SOQ54003.1    AGBW02012531    + More
OWR44890.1    JTDY01001414    KOB73924.1    NWSH01001030    PCG73025.1    KQ460045    KPJ18231.1    JRES01001160    KNC24976.1    KQ971354    EFA06048.1    ATLV01021336    KE525316    KFB46348.1    PYGN01000302    PSN48907.1    AJWK01014309    GGFK01008495    MBW41816.1    GGFJ01007711    MBW56852.1    GFDG01002446    JAV16353.1    ADMH02001214    ETN63631.1    AXCN02002214    CH477325    EAT43498.1    AAAB01008961    EAA11996.1    DS235751    EEB16370.1    GFDF01006519    JAV07565.1    GANO01001805    JAB58066.1    AJVK01020482    KK853153    KDR10578.1    GFDL01008255    JAV26790.1    AE014297    AY118554    AAF56941.1    AAM49923.1    KQ434809    KZC06218.1    GEZM01033253    GEZM01033252    GEZM01033251    JAV84303.1    CH933806    EDW16771.1    DS231865    EDS40369.1    CH940650    EDW67341.1    CH902617    EDV43816.1    CH480819    EDW53410.1    CH954182    EDV53178.1    CM000160    EDW98247.1    CH916373    EDV94387.1    EZ422607    ADD18883.1    CM000070    EAL28122.2    OUUW01000005    SPP81053.1    GDAI01001943    JAI15660.1    JXJN01007738    CH479179    EDW24200.1    NNAY01000193    OXU30112.1    GEDC01005861    JAS31437.1    GEDC01005866    JAS31432.1    KQ981285    KYN43203.1    CP012526    ALC46919.1    GL447336    EFN86540.1    GL888087    EGI67719.1    QOIP01000007    RLU20958.1    GAMD01002514    JAA99076.1    KK107364    EZA51931.1    KQ980832    KYN12396.1    GDIP01101655    JAM02060.1    KQ414667    KOC64741.1    JXUM01042943    KQ561344    KXJ78885.1    KZ288194    PBC33942.1    KQ982289    KYQ58424.1    GL767232    EFZ13990.1    KQ978068    KYM97608.1    NEVH01006756    PNF36424.1    KQ435863    KOX70355.1    AMQN01010616    KB308243    ELT98080.1    GL732526    EFX87971.1    GL443112    EFN62570.1    CH964232    EDW81187.1    ADTU01017112    GDIP01186102    JAJ37300.1    GDIP01230888    LRGB01001361    JAI92513.1    KZS12361.1    GBRD01016656    GDHC01008634    JAG49171.1    JAQ09995.1    KQ976394    KYM93244.1    GBHO01028369    JAG15235.1    GDIP01148506    JAJ74896.1    GDIP01120255    JAL83459.1    CCAG010013281    GAMC01003537    GAMC01003535    JAC03019.1    AY652655    AAV67032.1    GEFM01003792    JAP72004.1    GDIP01107208    JAL96506.1    GADI01001197    JAA72611.1   
Pfam
PF00459   Inositol_P
Interpro
IPR000760   Inositol_monophosphatase-like        + More
IPR020550   Inositol_monophosphatase_CS       
IPR020583   Inositol_monoP_metal-BS       
PDB
2WEF     E-value=1.52304e-81,     Score=770

Ontologies

Topology

Length:
311
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04637
Exp number, first 60 AAs:
0.01362
Total prob of N-in:
0.01202
outside
1  -  311
 
 

Population Genetic Test Statistics

Pi
212.143141
Theta
175.282292
Tajima's D
0.703953
CLR
0.356956
CSRT
0.567671616419179
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 EKTFRSVQVRVYGMSPTVGLVSFPDINERGKSPFSKTLKNLIDLEARKIIANAYYRTEDILRTNQDKLKKVFR 100.00 7e-20
28556443 LTDILGNFYK 100.00 1e-05
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