SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15126
Pre Gene Modal
BGIBMGA004991
Annotation
PREDICTED:_integumentary_mucin_C.1_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.789 Nuclear   Reliability : 1.962
 

Sequence

CDS
ATGAGCAAGCAACATGTTTGCTGCAACGGTTTTTGTACTAAGGGTATAAAAGCCACAGCAGCAATACAAAGCACAACCCCCGTTCAGGTCCTGAGTAGTGTAGTCGAGCCTAGTAGTACAAGCACAAGCACGAGCACAAGCACAACAACTAGTACAAGCACTTCTACCACAACTACCACGACAACGACTACAACGACTCCGAGTACCACCAGCTCGACAACAACGACAACGACGACACCACCGCCTCCGCCTCCGCCGCCGACCACCACCACCACAACGGAAGCGTCGCTACCTTTCCTACAGCTGTTACCTATACAGATACCTGAAGCTACCACGGCGCTAGCAAAGGCCCCAGCTAAAACAGGAAAAACACAAAAGCTGGTGTGTCCGAAGAGGGGAACAGCGCCTGTCATTCTGTTCCCGATTCCGTGCGACAACAATGCCCAATGCCGAGCCAGCAGCGGGCCAGACCAAGTTTGTTGCGATAAACGTTGCGTCAAAGGTGTGCCCGCCCCACGGCCGACGTCGGCGCCGCAGACTCACCAGCCATTACTTGGAGTGGTACCTCGAGAATGTCCTGCGGCACCACTGGGTGAACTCTTGTTCGAAGTGCAATCGTGCAAGACTGATTCAGATTGCTGGCCTCGTATATGCTGTCCCGACGGCACCCGCTCCTACTGTCGGACGGCACGAGCTCGCCTTGACCTGGTGCCCATCGCTAACCAGATAGATGGCCCGGTACGAATGTTGGAGCAGTATTTACAATGTACACCGCCACCTCAATACGACGTGTTCCCTCAACGCTGTAGCTCCAGCGTGGATTGCTTCCCGAACTTGTGTTGCGCGGAGGGTGGCAAAAAACATTGCAGGCCGCCACAAAGAAGTCTTCTTGCATTGCTGGCCGGAGTTACGCAGAGAGTTGGTTCAACAATAGTAAACTTCCGACAATCTCAAGCGAATGCGAATACTGTGTAA
Protein
MSKQHVCCNGFCTKGIKATAAIQSTTPVQVLSSVVEPSSTSTSTSTSTTTSTSTSTTTTTTTTTTTPSTTSSTTTTTTTPPPPPPPPTTTTTTEASLPFLQLLPIQIPEATTALAKAPAKTGKTQKLVCPKRGTAPVILFPIPCDNNAQCRASSGPDQVCCDKRCVKGVPAPRPTSAPQTHQPLLGVVPRECPAAPLGELLFEVQSCKTDSDCWPRICCPDGTRSYCRTARARLDLVPIANQIDGPVRMLEQYLQCTPPPQYDVFPQRCSSSVDCFPNLCCAEGGKKHCRPPQRSLLALLAGVTQRVGSTIVNFRQSQANANTV

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
324
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0327
Exp number, first 60 AAs:
0.0034
Total prob of N-in:
0.06668
outside
1  -  324
 
 

Population Genetic Test Statistics

Pi
249.939001
Theta
225.070224
Tajima's D
-1.965894
CLR
1.904314
CSRT
0.016299185040748
Interpretation
Possibly Positive selection
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