Gene

KWMTBOMO15112  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004905

Annotation

PREDICTED:_peroxisome_biogenesis_protein_6_[Amyelois_transitella]

Location

Bomo_Chr25(+):5389655-5406869      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.78

CDS

ATGTGTATCACAACATTACGTGTGACCCAACTAACTTTAGGAGAGAATATTCATGCAACAAAGCCACAAGATAAATATTTCAAGCCACAAGGATTTGATGATAATTTACACATGCTAGAACTCTGCCCAACTGGCTTAAAGCATATTTTTAATCAAATTCAAGAAACCATTTCACCATTTTTAAATGAAGATTTAAGTGACCTCTCATTGTTTTTATCGAGTCCGATTATACCAATGTTAGCCTTAACCGGCTGCTTGGGGTCTGGAAGACACTTAGCTGTAAAAACATTAGCAAAATTTAATGGAATTAATTGCCTCTCTATTGATTGCAATGCATTACAAAGCTCAACAGCTAAGCAGACTGAAAGTAAAATTAATGCAACCATACAAAAGGCAAAGGCTGCGGCACCTGTCATTGTGTTACTAGATAATTTTGAGGTATTTGCAATAGATGCAGAAAACAATGAGGACTGTAGAGTGATTGAATACTTTATGAACACAATCACTGATTTATATCAGAACTACACAAAGCACCCTATCATATTCATTGCTGTGACGAAAGATATAGAATTTAAACCGAACATAAGTAGGCTGTTTCTAGAAAAGTTTCACATACCGAAATTGAATCTTAGACAGAGATATGAGATGCTAGACTGGTTTTCCAACGTAATGAGACTAAATATAGATGGTGCAGAGCATGTGAAAGCAAATGAGTTATTAGTAAAACAAACACCAGTGAATGTAAATAGTCAGAATGTTTTACAAAGGGTGGCAGCGAAGACTGAAACGTTTTTGTATGGCGATTTGGACACATTAGTGCACTTCGCGACTAGAGAGTCGTATTTGAGGCAGCACAATAATTATAATCAACTACCGCCCGATCCTGACTTGCGGTTAATAAAGGAAGAAGATTTTAACTCGGCTTTAGAATCAATAAGAAAGCTACAAAGTCAACATTTGGACGCGCCGAAAATACCCAAAGTGTACTGGGATGATATCGGAGGGTTGGAGAAACTAAAAAAGGAATTACTTAAGACAATACAGCTTCCTATTAAATACCCACACTTGTTCAAAAACGCGAGCCTCAAAAGATCAGGCATACTGTTGTACGGGCCTCCAGGTTGTGGGAAAACGTTAGTAGCTAAAGCAGTAAGCACGGAGTTGAATGTGAGCTTTCTCAGTGTCAAAGGTCCCGAGCTACTAAATATGTACATCGGTCAGTCCGAAGAGAATGTTAGAAAAGTCTTCGAGTCTGCACGCGCATCGTCTCCGTGCATAATATTCGTGGACGAGCTGGACGCGCTGGCGCCGCGCCGCGGGGCCGCCGGGGACTCCGCCGGCGCCAGCGACCGCGTCGTCAGCCAACTGCTCGCTGAACTCGACGGGGTCAATACCTCGGGAGATGAAGACACGTCCAGCTTCGTGTTCATAATGGGCGCAACGAACCGGCCCGATTTACTCGAACAATCTCTGCTGCGGCCCGGTAGACTCGATAAGCTCGTCTACGTGGGGCCCTACTGTGGGACGCGAGAGAAGACATCAGTGCTCGAAGCGCTTTGTCGGAAGTACAAACTAAGACCTGAAGTAAATTTGGAAGCCGTCGCAGAGGCACTACCCGACAAGTGCACCGGCGCTGACTTACTGCAGGTTGTCTCTACTGCACGGTCAGCGGCCGTGAGAGCACTCGTTGCTAAGCTACACAATGGAACGTTAAAGGAAAGCGAACTGAGTCCCGACTCCATCGTTATAGGGGTAACTGAACTATGGGAGGGCGTTGTATCATTCCGGCCCTCGGTCACAGACGATGAACTGTCGCATTACGAAGCGATGGAGTCACAAATCAACAGAGACGCCATAGAAAAGGAATTTCAGTTCAAAAATTTTAATGAAGCTTTTGGATTCATGACCAGGGTCGCGCTGCTAGCTGAGAAAATGGATCATCATCCTGAGTGGTTCAATGTATACAACAAGTTGCAAGTGACACTTTCTTCACATGACGTAAATGGATTGAGCAAAAGGGATATCAAAATGGCCAGTTTTATGGATAAAAATTATAATTAA

Protein

MCITTLRVTQLTLGENIHATKPQDKYFKPQGFDDNLHMLELCPTGLKHIFNQIQETISPFLNEDLSDLSLFLSSPIIPMLALTGCLGSGRHLAVKTLAKFNGINCLSIDCNALQSSTAKQTESKINATIQKAKAAAPVIVLLDNFEVFAIDAENNEDCRVIEYFMNTITDLYQNYTKHPIIFIAVTKDIEFKPNISRLFLEKFHIPKLNLRQRYEMLDWFSNVMRLNIDGAEHVKANELLVKQTPVNVNSQNVLQRVAAKTETFLYGDLDTLVHFATRESYLRQHNNYNQLPPDPDLRLIKEEDFNSALESIRKLQSQHLDAPKIPKVYWDDIGGLEKLKKELLKTIQLPIKYPHLFKNASLKRSGILLYGPPGCGKTLVAKAVSTELNVSFLSVKGPELLNMYIGQSEENVRKVFESARASSPCIIFVDELDALAPRRGAAGDSAGASDRVVSQLLAELDGVNTSGDEDTSSFVFIMGATNRPDLLEQSLLRPGRLDKLVYVGPYCGTREKTSVLEALCRKYKLRPEVNLEAVAEALPDKCTGADLLQVVSTARSAAVRALVAKLHNGTLKESELSPDSIVIGVTELWEGVVSFRPSVTDDELSHYEAMESQINRDAIEKEFQFKNFNEAFGFMTRVALLAEKMDHHPEWFNVYNKLQVTLSSHDVNGLSKRDIKMASFMDKNYN

Similarity

Belongs to the AAA ATPase family.

Uniprot

A0A2H1WD00   A0A194PHP2   A0A194RLR3   A0A212FL30   A0A0L7L367   B4QAP6   + More
A0A0J9TYL5   A0A0J9RA23   A0A2J7PH28   A0A0L0BNF3   B4HN18   B3NN35   A0A0Q5VPL1   Q9V5R2   A1Z8D1   B5DZX0   A0A1W4VQE8   B4H8H0   B4P7N0   A0A1W4VDE3   A0A2J7PH22   A0A0R1DNM7   B3MIL9   A0A1A9USQ0   A0A0P8ZS19   A0A1I8Q7G9   A0A1I8Q7F9   A0A3B0JK62   A0A3B0JQ14   A0A1B0G0P0   A0A1B0GMP6   A0A1I8MDQ1   A0A1I8MDQ4   A0A1I8MDQ2   T1PAA0   B4MKB9   A0A0A1XCA6   W8BMK9   A0A0A1WD77   A0A0A1X9U1   W8BZF4   B4LMS7   A0A182IZ93   A0A0K8VQ15   A0A1L8DTT4   A0A0K8VUJ9   A0A0K8V620   B4KNA1   A0A0Q9XJF9   A0A084W3G0   B4J6S5   Q17NT9   A0A1B0GLR1   A0A0M3QVP5   A0A1L8DU68   A0A1Y1NDG1   A0A182HFD2   A0A182VZB5   A0A182SK23   A0A182V008   A0A182R627   A0A182L9Q6   A0A182U626   A0A182HLC4   Q7PXV3   A0A0C9QTY8   A0A182JU06   D6WES7   A0A2A3EQ48   A0A0L7RBM6   A0A2M4AMJ0   A0A182QM46   A0A154PLX6   W5J5E6   B0WIY8   N6TLX8   K7J5W7   A0A182WSH2   A0A182PGP4   A0A182NS49   A0A182FBP3   E2A7C3   A0A182YAK5   A0A232FFX6   A0A0P6DT56   E2C8G4   A0A0P5QSH4   A0A0P6JI49   A0A0P5WJ85   A0A0M9A1U2   A0A0N8CDB5   A0A164REC3   F4WPZ4   A0A158NIK0   A0A0P6BWQ3   K1PWD4   A0A0P5WRG3   W5NEY3   A0A195BCW3  

Pubmed

26354079    22118469    26227816    17994087    22936249    26108605    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    17550304    25315136    25830018    24495485    24438588    17510324    28004739    26483478    20966253    12364791    14747013    17210077    18362917    19820115    20920257    23761445    23537049    20075255    20798317    25244985    28648823    21719571    21347285    22992520   

EMBL

ODYU01007835    SOQ50948.1    KQ459604    KPI92239.1    KQ460045    KPJ18255.1    + More
AGBW02007949    OWR54399.1    JTDY01003307    KOB69766.1    CM000362    EDX06551.1    CM002911    KMY92880.1    KMY92881.1    KMY92882.1    NEVH01025150    PNF15634.1    JRES01001601    KNC21562.1    CH480816    EDW47322.1    CH954179    EDV56555.1    KQS62900.1    AY058375    AE013599    AAL13604.1    ACZ94389.1    AAF58736.4    CM000071    EDY69249.1    CH479223    EDW35005.1    CM000158    EDW90065.1    PNF15633.1    KRJ98885.1    CH902619    EDV38095.1    KPU77274.1    OUUW01000001    SPP75750.1    SPP75749.1    CCAG010023102    AJVK01012215    AJVK01012216    KA645619    AFP60248.1    CH963846    EDW72558.1    GBXI01005243    JAD09049.1    GAMC01011943    GAMC01011939    GAMC01011938    JAB94616.1    GBXI01017495    JAC96796.1    GBXI01006223    GBXI01003716    JAD08069.1    JAD10576.1    GAMC01011941    GAMC01011935    JAB94614.1    CH940648    EDW61018.2    GDHF01011335    JAI40979.1    GFDF01004201    JAV09883.1    GDHF01031927    GDHF01030711    GDHF01009755    JAI20387.1    JAI21603.1    JAI42559.1    GDHF01018008    JAI34306.1    CH933808    EDW09954.1    KRG05006.1    ATLV01019994    KE525289    KFB44754.1    CH916367    EDW00978.1    CH477196    EAT48385.1    AJWK01015551    AJWK01015552    CP012524    ALC42753.1    GFDF01004117    JAV09967.1    GEZM01009837    JAV94276.1    JXUM01037600    JXUM01037601    JXUM01037602    KQ561134    KXJ79611.1    APCN01000890    AAAB01008987    EAA00892.4    GBYB01007209    GBYB01008900    JAG76976.1    JAG78667.1    KQ971326    EEZ99865.1    KZ288203    PBC33392.1    KQ414617    KOC68156.1    GGFK01008682    MBW42003.1    AXCN02000266    KQ434977    KZC12881.1    ADMH02002183    ETN57979.1    DS231954    EDS28849.1    APGK01030336    KB740770    ENN78988.1    GL437329    EFN70620.1    NNAY01000305    OXU29339.1    GDIQ01072746    JAN21991.1    GL453666    EFN75694.1    GDIQ01110532    JAL41194.1    GDIQ01007478    JAN87259.1    GDIP01098377    JAM05338.1    KQ435793    KOX74203.1    GDIP01142927    JAL60787.1    LRGB01002190    KZS08580.1    GL888261    EGI63723.1    ADTU01016871    GDIP01008481    JAM95234.1    JH818807    EKC26023.1    GDIP01083289    JAM20426.1    AHAT01027972    KQ976513    KYM82398.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000037510    UP000000304    UP000235965    + More
UP000037069    UP000001292    UP000008711    UP000000803    UP000001819    UP000192221    UP000008744    UP000002282    UP000007801    UP000078200    UP000095300    UP000268350    UP000092444    UP000092462    UP000095301    UP000007798    UP000008792    UP000075880    UP000009192    UP000030765    UP000001070    UP000008820    UP000092461    UP000092553    UP000069940    UP000249989    UP000075920    UP000075901    UP000075903    UP000075882    UP000075902    UP000075840    UP000007062    UP000075881    UP000007266    UP000242457    UP000053825    UP000075886    UP000076502    UP000000673    UP000002320    UP000019118    UP000002358    UP000076407    UP000075885    UP000075884    UP000069272    UP000000311    UP000076408    UP000215335    UP000008237    UP000053105    UP000076858    UP000007755    UP000005205    UP000005408    UP000018468    UP000078540   

PRIDE

Q9V5R2   

Pfam

PF03297   Ribosomal_S25        + More
PF00004   AAA
PF17862   AAA_lid_3
PF00288   GHMP_kinases_N
PF18376   MDD_C
PF09336   Vps4_C

Interpro

IPR003593   AAA+_ATPase        + More
IPR004977   Ribosomal_S25       
IPR003959   ATPase_AAA_core       
IPR027417   P-loop_NTPase       
IPR003960   ATPase_AAA_CS       
IPR041569   AAA_lid_3       
IPR020568   Ribosomal_S5_D2-typ_fold       
IPR029765   Mev_diP_decarb       
IPR041431   Mvd1_C       
IPR036554   GHMP_kinase_C_sf       
IPR006204   GHMP_kinase_N_dom       
IPR014721   Ribosomal_S5_D2-typ_fold_subgr       
IPR015415   Vps4_C       

SUPFAM

SSF52540   SSF52540        + More
SSF54211   SSF54211       
SSF55060   SSF55060       

Gene 3D

3.30.230.10     3.30.70.890    

ProteinModelPortal

A0A2H1WD00   A0A194PHP2   A0A194RLR3   A0A212FL30   A0A0L7L367   B4QAP6   + More
A0A0J9TYL5   A0A0J9RA23   A0A2J7PH28   A0A0L0BNF3   B4HN18   B3NN35   A0A0Q5VPL1   Q9V5R2   A1Z8D1   B5DZX0   A0A1W4VQE8   B4H8H0   B4P7N0   A0A1W4VDE3   A0A2J7PH22   A0A0R1DNM7   B3MIL9   A0A1A9USQ0   A0A0P8ZS19   A0A1I8Q7G9   A0A1I8Q7F9   A0A3B0JK62   A0A3B0JQ14   A0A1B0G0P0   A0A1B0GMP6   A0A1I8MDQ1   A0A1I8MDQ4   A0A1I8MDQ2   T1PAA0   B4MKB9   A0A0A1XCA6   W8BMK9   A0A0A1WD77   A0A0A1X9U1   W8BZF4   B4LMS7   A0A182IZ93   A0A0K8VQ15   A0A1L8DTT4   A0A0K8VUJ9   A0A0K8V620   B4KNA1   A0A0Q9XJF9   A0A084W3G0   B4J6S5   Q17NT9   A0A1B0GLR1   A0A0M3QVP5   A0A1L8DU68   A0A1Y1NDG1   A0A182HFD2   A0A182VZB5   A0A182SK23   A0A182V008   A0A182R627   A0A182L9Q6   A0A182U626   A0A182HLC4   Q7PXV3   A0A0C9QTY8   A0A182JU06   D6WES7   A0A2A3EQ48   A0A0L7RBM6   A0A2M4AMJ0   A0A182QM46   A0A154PLX6   W5J5E6   B0WIY8   N6TLX8   K7J5W7   A0A182WSH2   A0A182PGP4   A0A182NS49   A0A182FBP3   E2A7C3   A0A182YAK5   A0A232FFX6   A0A0P6DT56   E2C8G4   A0A0P5QSH4   A0A0P6JI49   A0A0P5WJ85   A0A0M9A1U2   A0A0N8CDB5   A0A164REC3   F4WPZ4   A0A158NIK0   A0A0P6BWQ3   K1PWD4   A0A0P5WRG3   W5NEY3   A0A195BCW3  

PDB

5VCA     E-value=5.82674e-56,     Score=553

KEGG

101744157    K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] | (RefSeq) probable pterin-4-alpha-ca

PATHWAY

00790    Folate biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0005524   GO:0016021   GO:0007031   GO:0005777   GO:0006625   GO:0016558   GO:0016887   GO:0005778   GO:0005829   GO:0004163   GO:0019287   GO:0006729   GO:0008124   GO:0006412   GO:0005515   GO:0000166   GO:0003677   GO:0008408   GO:0005112   GO:0015930  

Length:

686

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.790629999999998

Exp number, first 60 AAs:

0.00013

Total prob of N-in:

0.03635

outside

1  -  686

 

 

Pi

262.134966

Theta

186.325877

Tajima's D

2.484172

CLR

0.327259

CSRT

0.942802859857007

Interpretation

Uncertain